RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 CIRBP-AS1Q8TBR5 109 aa6.69□□□□□ -1.34
VPS9D1-206ENST00000567379 SCXQ7RTU7 201 aa6.68□□□□□ -1.34
VPS9D1-206ENST00000567379 DYNC1H1Q14204 4646 aaKnown RBP6.67□□□□□ -1.34
VPS9D1-206ENST00000567379 SPRR1BP22528 89 aa6.67□□□□□ -1.34
VPS9D1-206ENST00000567379 XGP55808 180 aa6.67□□□□□ -1.34
VPS9D1-206ENST00000567379 C3orf22Q8N5N4 141 aa6.67□□□□□ -1.34
VPS9D1-206ENST00000567379 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
VPS9D1-206ENST00000567379 ZNF861PO60384 105 aa6.66□□□□□ -1.34
VPS9D1-206ENST00000567379 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
VPS9D1-206ENST00000567379 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
VPS9D1-206ENST00000567379 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
VPS9D1-206ENST00000567379 LINC00643Q86TS7 51 aa6.65□□□□□ -1.34
VPS9D1-206ENST00000567379 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.34
VPS9D1-206ENST00000567379 LINC00846Q9NV44 126 aa6.65□□□□□ -1.34
VPS9D1-206ENST00000567379 MT-ATP8P03928 68 aa6.64□□□□□ -1.35
VPS9D1-206ENST00000567379 IGLV7-43P04211 117 aa6.64□□□□□ -1.35
VPS9D1-206ENST00000567379 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
VPS9D1-206ENST00000567379 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
VPS9D1-206ENST00000567379 IGLV8-61A0A075B6I0 122 aa6.62□□□□□ -1.35
VPS9D1-206ENST00000567379 SPRR4Q96PI1 79 aa6.62□□□□□ -1.35
VPS9D1-206ENST00000567379 DNAH8Q96JB1 4490 aa6.61□□□□□ -1.35
VPS9D1-206ENST00000567379 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
VPS9D1-206ENST00000567379 A0A1B0GW54 56 aa6.61□□□□□ -1.35
VPS9D1-206ENST00000567379 Q6JHZ5 121 aa6.61□□□□□ -1.35
VPS9D1-206ENST00000567379 HAMPP81172 84 aa6.6□□□□□ -1.35
VPS9D1-206ENST00000567379 PKD1P98161 4303 aa6.6□□□□□ -1.35
VPS9D1-206ENST00000567379 DMBT1Q9UGM3 2413 aaPredicted RBP6.59□□□□□ -1.35
VPS9D1-206ENST00000567379 DNAH5Q8TE73 4624 aa6.59□□□□□ -1.35
VPS9D1-206ENST00000567379 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
VPS9D1-206ENST00000567379 Q8NBF4 154 aa6.59□□□□□ -1.35
VPS9D1-206ENST00000567379 HSPG2P98160 4391 aa6.58□□□□□ -1.36
VPS9D1-206ENST00000567379 A0A1W2PNM2 257 aa6.58□□□□□ -1.36
VPS9D1-206ENST00000567379 SCGB1A1P11684 91 aa6.58□□□□□ -1.36
VPS9D1-206ENST00000567379 ATP5EP2Q5VTU8 51 aa6.58□□□□□ -1.36
VPS9D1-206ENST00000567379 IGFL1Q6UW32 110 aa6.58□□□□□ -1.36
VPS9D1-206ENST00000567379 TRBV7-7A0A0K0K1E9 115 aa6.57□□□□□ -1.36
VPS9D1-206ENST00000567379 Q6Q795 121 aa6.57□□□□□ -1.36
VPS9D1-206ENST00000567379 Q6ZVQ6 151 aa6.57□□□□□ -1.36
VPS9D1-206ENST00000567379 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
VPS9D1-206ENST00000567379 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
VPS9D1-206ENST00000567379 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
VPS9D1-206ENST00000567379 NREPQ16612 68 aa6.55□□□□□ -1.36
VPS9D1-206ENST00000567379 C9orf153Q5TBE3 101 aa6.55□□□□□ -1.36
VPS9D1-206ENST00000567379 IGLV9-49A0A0B4J1Y8 123 aa6.54□□□□□ -1.36
VPS9D1-206ENST00000567379 CRYGAP11844 174 aa6.54□□□□□ -1.36
VPS9D1-206ENST00000567379 A0A0G2JQZ4 141 aa6.52□□□□□ -1.37
VPS9D1-206ENST00000567379 CXCL6P80162 114 aa6.51□□□□□ -1.37
VPS9D1-206ENST00000567379 MOBPQ13875 183 aa6.5□□□□□ -1.37
VPS9D1-206ENST00000567379 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
VPS9D1-206ENST00000567379 A0A087WSZ3 146 aa6.48□□□□□ -1.37
VPS9D1-206ENST00000567379 BPY2O14599 106 aa6.48□□□□□ -1.37
VPS9D1-206ENST00000567379 HIST1H4AP62805 103 aaKnown RBP6.48□□□□□ -1.37
VPS9D1-206ENST00000567379 FAM229BQ4G0N7 80 aa6.48□□□□□ -1.37
VPS9D1-206ENST00000567379 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
VPS9D1-206ENST00000567379 SPINK6Q6UWN8 80 aa6.47□□□□□ -1.37
VPS9D1-206ENST00000567379 PCP4P48539 62 aa6.46□□□□□ -1.38
VPS9D1-206ENST00000567379 SSBP3-AS1Q7Z2R9 100 aa6.46□□□□□ -1.38
VPS9D1-206ENST00000567379 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
VPS9D1-206ENST00000567379 FAM236AA0A1B0GUQ0 79 aa6.44□□□□□ -1.38
VPS9D1-206ENST00000567379 FAM236BA0A1B0GV22 79 aa6.44□□□□□ -1.38
VPS9D1-206ENST00000567379 CDK2AP2O75956 126 aa6.43□□□□□ -1.38
VPS9D1-206ENST00000567379 HRCT1Q6UXD1 115 aa6.43□□□□□ -1.38
VPS9D1-206ENST00000567379 Q8N1X5 172 aa6.43□□□□□ -1.38
VPS9D1-206ENST00000567379 SS18L2Q9UHA2 77 aa6.43□□□□□ -1.38
VPS9D1-206ENST00000567379 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
VPS9D1-206ENST00000567379 A0A087WVE0 104 aa6.42□□□□□ -1.38
VPS9D1-206ENST00000567379 CD164Q04900 197 aa6.42□□□□□ -1.38
VPS9D1-206ENST00000567379 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
VPS9D1-206ENST00000567379 PLA2G1BP04054 148 aaKnown RBP6.41□□□□□ -1.38
VPS9D1-206ENST00000567379 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
VPS9D1-206ENST00000567379 A0A087X002 238 aa6.4□□□□□ -1.38
VPS9D1-206ENST00000567379 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
VPS9D1-206ENST00000567379 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
VPS9D1-206ENST00000567379 J3KT08 172 aa6.39□□□□□ -1.39
VPS9D1-206ENST00000567379 ATOX1O00244 68 aa6.39□□□□□ -1.39
VPS9D1-206ENST00000567379 IGKV4-1P06312 121 aa6.39□□□□□ -1.39
VPS9D1-206ENST00000567379 KRTAP13-2Q52LG2 175 aa6.39□□□□□ -1.39
VPS9D1-206ENST00000567379 DSCR10P59022 87 aa6.38□□□□□ -1.39
VPS9D1-206ENST00000567379 Q8N9L7 120 aa6.38□□□□□ -1.39
VPS9D1-206ENST00000567379 LINC00472Q9H8W2 130 aa6.38□□□□□ -1.39
VPS9D1-206ENST00000567379 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
VPS9D1-206ENST00000567379 DEFB116Q30KQ4 102 aa6.37□□□□□ -1.39
VPS9D1-206ENST00000567379 TYMSOSQ8TAI1 123 aa6.36□□□□□ -1.39
VPS9D1-206ENST00000567379 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
VPS9D1-206ENST00000567379 K7EQZ3 153 aa6.34□□□□□ -1.39
VPS9D1-206ENST00000567379 NDUFB1O75438 58 aa6.34□□□□□ -1.39
VPS9D1-206ENST00000567379 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
VPS9D1-206ENST00000567379 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.39
VPS9D1-206ENST00000567379 A8MWP4 228 aa6.33□□□□□ -1.4
VPS9D1-206ENST00000567379 Q96NJ1 140 aa6.33□□□□□ -1.4
VPS9D1-206ENST00000567379 VPS13BQ7Z7G8 4022 aa6.32□□□□□ -1.4
VPS9D1-206ENST00000567379 ASB16-AS1Q495Z4 193 aa6.32□□□□□ -1.4
VPS9D1-206ENST00000567379 PRR15Q8IV56 129 aa6.32□□□□□ -1.4
VPS9D1-206ENST00000567379 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
VPS9D1-206ENST00000567379 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
VPS9D1-206ENST00000567379 Q5VSD8 79 aa6.31□□□□□ -1.4
VPS9D1-206ENST00000567379 Q5XG85 94 aa6.31□□□□□ -1.4
VPS9D1-206ENST00000567379 LIMD2Q9BT23 127 aa6.31□□□□□ -1.4
VPS9D1-206ENST00000567379 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
VPS9D1-206ENST00000567379 SPINK1P00995 79 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 966 ms