RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 ZNF861PO60384 105 aa13.66□□□□□ -0.22
SYNGR3-202ENST00000562045 LINC01600Q96MT4 127 aa13.66□□□□□ -0.22
SYNGR3-202ENST00000562045 FAT3Q8TDW7 4589 aa13.65□□□□□ -0.22
SYNGR3-202ENST00000562045 SCGB1A1P11684 91 aa13.64□□□□□ -0.23
SYNGR3-202ENST00000562045 ST20-AS1Q8NBB2 130 aa13.61□□□□□ -0.23
SYNGR3-202ENST00000562045 IGLV5-48A0A075B6I7 105 aa13.6□□□□□ -0.23
SYNGR3-202ENST00000562045 PPDPFLQ8WWR9 84 aa13.6□□□□□ -0.23
SYNGR3-202ENST00000562045 DEFB105AQ8NG35 78 aa13.59□□□□□ -0.23
SYNGR3-202ENST00000562045 LINC01547P58512 204 aaPredicted RBP13.58□□□□□ -0.24
SYNGR3-202ENST00000562045 ETDBQ3ZM63 59 aa13.57□□□□□ -0.24
SYNGR3-202ENST00000562045 TEN1Q86WV5 123 aa13.56□□□□□ -0.24
SYNGR3-202ENST00000562045 Q8N377 158 aa13.56□□□□□ -0.24
SYNGR3-202ENST00000562045 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
SYNGR3-202ENST00000562045 J3QR89 54 aa13.56□□□□□ -0.24
SYNGR3-202ENST00000562045 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
SYNGR3-202ENST00000562045 ZNF706Q9Y5V0 76 aaPredicted RBP13.54□□□□□ -0.24
SYNGR3-202ENST00000562045 LAMTOR3Q9UHA4 124 aa13.53□□□□□ -0.24
SYNGR3-202ENST00000562045 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
SYNGR3-202ENST00000562045 SPRR1BP22528 89 aa13.5□□□□□ -0.25
SYNGR3-202ENST00000562045 SPRR4Q96PI1 79 aa13.5□□□□□ -0.25
SYNGR3-202ENST00000562045 NDUFV3P56181 108 aaKnown RBP13.5□□□□□ -0.25
SYNGR3-202ENST00000562045 JMJD7-PLA2G4BH0Y9G9 81 aa13.49□□□□□ -0.25
SYNGR3-202ENST00000562045 SIGMAR1Q99720 223 aa13.48□□□□□ -0.25
SYNGR3-202ENST00000562045 KRTAP29-1A8MX34 341 aaPredicted RBP13.47□□□□□ -0.25
SYNGR3-202ENST00000562045 C3orf22Q8N5N4 141 aa13.46□□□□□ -0.25
SYNGR3-202ENST00000562045 OBSCN-AS1Q96MR7 158 aa13.46□□□□□ -0.25
SYNGR3-202ENST00000562045 TNXBP22105 4242 aa13.45□□□□□ -0.26
SYNGR3-202ENST00000562045 LINC00483Q53H64 154 aa13.44□□□□□ -0.26
SYNGR3-202ENST00000562045 SMIM29Q86T20 159 aa13.44□□□□□ -0.26
SYNGR3-202ENST00000562045 A0A1B0GV72 72 aa13.44□□□□□ -0.26
SYNGR3-202ENST00000562045 RBM3P98179 157 aaKnown RBP13.43□□□□□ -0.26
SYNGR3-202ENST00000562045 F8WEM9 126 aa13.42□□□□□ -0.26
SYNGR3-202ENST00000562045 OXTP01178 125 aa13.42□□□□□ -0.26
SYNGR3-202ENST00000562045 HERC1Q15751 4861 aa13.4□□□□□ -0.26
SYNGR3-202ENST00000562045 DMBT1Q9UGM3 2413 aaPredicted RBP13.4□□□□□ -0.26
SYNGR3-202ENST00000562045 MT1HL1P0DM35 61 aa13.39□□□□□ -0.27
SYNGR3-202ENST00000562045 C14orf132Q9NPU4 83 aa13.39□□□□□ -0.27
SYNGR3-202ENST00000562045 KRTAP1-4P0C5Y4 121 aa13.38□□□□□ -0.27
SYNGR3-202ENST00000562045 DSCR8Q96T75 97 aa13.38□□□□□ -0.27
SYNGR3-202ENST00000562045 J3QL48 77 aa13.36□□□□□ -0.27
SYNGR3-202ENST00000562045 ANAPC11Q9NYG5 84 aa13.34□□□□□ -0.27
SYNGR3-202ENST00000562045 TRBV7-4A0A0J9YYF1 115 aa13.33□□□□□ -0.27
SYNGR3-202ENST00000562045 IGLV8-61A0A075B6I0 122 aa13.33□□□□□ -0.28
SYNGR3-202ENST00000562045 LOC110117498A0A087WWA1 95 aa13.33□□□□□ -0.28
SYNGR3-202ENST00000562045 PDE6GP18545 87 aa13.33□□□□□ -0.28
SYNGR3-202ENST00000562045 IGLV9-49A0A0B4J1Y8 123 aa13.3□□□□□ -0.28
SYNGR3-202ENST00000562045 FAM229BQ4G0N7 80 aa13.3□□□□□ -0.28
SYNGR3-202ENST00000562045 KRTAP10-8P60410 259 aa13.29□□□□□ -0.28
SYNGR3-202ENST00000562045 Q6ZQT0 140 aa13.29□□□□□ -0.28
SYNGR3-202ENST00000562045 PRR26Q8N8Z3 221 aa13.29□□□□□ -0.28
SYNGR3-202ENST00000562045 C9orf153Q5TBE3 101 aa13.28□□□□□ -0.28
SYNGR3-202ENST00000562045 CDIP1Q9H305 208 aa13.28□□□□□ -0.28
SYNGR3-202ENST00000562045 Q6JHZ5 121 aa13.27□□□□□ -0.28
SYNGR3-202ENST00000562045 CCKP06307 115 aa13.26□□□□□ -0.29
SYNGR3-202ENST00000562045 Q8NBF4 154 aa13.25□□□□□ -0.29
SYNGR3-202ENST00000562045 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
SYNGR3-202ENST00000562045 A0A087X002 238 aa13.24□□□□□ -0.29
SYNGR3-202ENST00000562045 CRYGAP11844 174 aa13.24□□□□□ -0.29
SYNGR3-202ENST00000562045 MOBPQ13875 183 aa13.24□□□□□ -0.29
SYNGR3-202ENST00000562045 FAM240AA0A1B0GVK7 77 aa13.19□□□□□ -0.3
SYNGR3-202ENST00000562045 SSBP3-AS1Q7Z2R9 100 aa13.18□□□□□ -0.3
SYNGR3-202ENST00000562045 A0A0G2JQZ4 141 aa13.17□□□□□ -0.3
SYNGR3-202ENST00000562045 A0A1W2PNM2 257 aa13.17□□□□□ -0.3
SYNGR3-202ENST00000562045 ACYP1P07311 99 aa13.17□□□□□ -0.3
SYNGR3-202ENST00000562045 KRTAP13-2Q52LG2 175 aa13.17□□□□□ -0.3
SYNGR3-202ENST00000562045 A0A1B0GW54 56 aa13.13□□□□□ -0.31
SYNGR3-202ENST00000562045 Q6Q795 121 aa13.13□□□□□ -0.31
SYNGR3-202ENST00000562045 MT-ATP8P03928 68 aa13.12□□□□□ -0.31
SYNGR3-202ENST00000562045 TYMSOSQ8TAI1 123 aa13.1□□□□□ -0.31
SYNGR3-202ENST00000562045 LINC00846Q9NV44 126 aa13.07□□□□□ -0.32
SYNGR3-202ENST00000562045 CD164Q04900 197 aa13.05□□□□□ -0.32
SYNGR3-202ENST00000562045 HMCN2Q8NDA2 5059 aa13.03□□□□□ -0.32
SYNGR3-202ENST00000562045 A0A087WSZ3 146 aa13.03□□□□□ -0.32
SYNGR3-202ENST00000562045 TRBV7-7A0A0K0K1E9 115 aa13.03□□□□□ -0.32
SYNGR3-202ENST00000562045 HRCT1Q6UXD1 115 aa13.03□□□□□ -0.32
SYNGR3-202ENST00000562045 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
SYNGR3-202ENST00000562045 C4orf48Q5BLP8 95 aa12.97□□□□□ -0.33
SYNGR3-202ENST00000562045 NREPQ16612 68 aa12.96□□□□□ -0.33
SYNGR3-202ENST00000562045 Q6ZVQ6 151 aa12.96□□□□□ -0.34
SYNGR3-202ENST00000562045 SS18L2Q9UHA2 77 aa12.96□□□□□ -0.34
SYNGR3-202ENST00000562045 LINC00304Q8N9R0 145 aa12.95□□□□□ -0.34
SYNGR3-202ENST00000562045 ANAPC13Q9BS18 74 aa12.93□□□□□ -0.34
SYNGR3-202ENST00000562045 SPAG11AQ6PDA7 123 aa12.93□□□□□ -0.34
SYNGR3-202ENST00000562045 SVIPQ8NHG7 77 aa12.93□□□□□ -0.34
SYNGR3-202ENST00000562045 SPINK1P00995 79 aa12.92□□□□□ -0.34
SYNGR3-202ENST00000562045 LINC00643Q86TS7 51 aa12.91□□□□□ -0.34
SYNGR3-202ENST00000562045 LIMD2Q9BT23 127 aa12.88□□□□□ -0.35
SYNGR3-202ENST00000562045 Q5XG85 94 aa12.87□□□□□ -0.35
SYNGR3-202ENST00000562045 RPS29P62273 56 aaKnown RBP12.86□□□□□ -0.35
SYNGR3-202ENST00000562045 ATP5EP2Q5VTU8 51 aa12.84□□□□□ -0.35
SYNGR3-202ENST00000562045 ASB16-AS1Q495Z4 193 aa12.82□□□□□ -0.36
SYNGR3-202ENST00000562045 BPY2O14599 106 aa12.82□□□□□ -0.36
SYNGR3-202ENST00000562045 LINC00472Q9H8W2 130 aa12.82□□□□□ -0.36
SYNGR3-202ENST00000562045 CXCL6P80162 114 aa12.79□□□□□ -0.36
SYNGR3-202ENST00000562045 Q96NJ1 140 aa12.78□□□□□ -0.36
SYNGR3-202ENST00000562045 IGKV3D-7A0A0C4DH55 119 aa12.77□□□□□ -0.36
SYNGR3-202ENST00000562045 DEFB116Q30KQ4 102 aa12.77□□□□□ -0.36
SYNGR3-202ENST00000562045 IMUPQ9GZP8 106 aa12.77□□□□□ -0.36
SYNGR3-202ENST00000562045 LPAP08519 4548 aa12.76□□□□□ -0.37
SYNGR3-202ENST00000562045 J3KT08 172 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms