RNA–Protein interactions for RNA: ENST00000561540.1

KCTD13-202, Transcript of potassium channel tetramerization domain containing 13, humanhuman

TSL 1 (best) BASIC

Gene KCTD13, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD13-202ENST00000561540 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
KCTD13-202ENST00000561540 VPS13BQ7Z7G8 4022 aa13.21□□□□□ -0.29
KCTD13-202ENST00000561540 PRLHP81277 87 aa13.2□□□□□ -0.3
KCTD13-202ENST00000561540 ST20-AS1Q8NBB2 130 aa13.2□□□□□ -0.3
KCTD13-202ENST00000561540 TRBV7-7A0A0K0K1E9 115 aa13.2□□□□□ -0.3
KCTD13-202ENST00000561540 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
KCTD13-202ENST00000561540 KRTAP13-1Q8IUC0 172 aa13.2□□□□□ -0.3
KCTD13-202ENST00000561540 H0Y9J4 135 aa13.19□□□□□ -0.3
KCTD13-202ENST00000561540 C21orf62-AS1Q17RA5 79 aa13.19□□□□□ -0.3
KCTD13-202ENST00000561540 CDK2AP2O75956 126 aa13.16□□□□□ -0.3
KCTD13-202ENST00000561540 UBE2AP49459 152 aa13.16□□□□□ -0.3
KCTD13-202ENST00000561540 IMUPQ9GZP8 106 aa13.16□□□□□ -0.3
KCTD13-202ENST00000561540 SRRM2Q9UQ35 2752 aaKnown RBP13.16□□□□□ -0.3
KCTD13-202ENST00000561540 HSPG2P98160 4391 aa13.15□□□□□ -0.3
KCTD13-202ENST00000561540 FAT1Q14517 4588 aa13.15□□□□□ -0.3
KCTD13-202ENST00000561540 RYR1P21817 5038 aa13.13□□□□□ -0.31
KCTD13-202ENST00000561540 SMR3BP02814 79 aaPredicted RBP13.13□□□□□ -0.31
KCTD13-202ENST00000561540 Q6JHZ5 121 aa13.13□□□□□ -0.31
KCTD13-202ENST00000561540 IGLV7-43P04211 117 aa13.12□□□□□ -0.31
KCTD13-202ENST00000561540 HIGD2AQ9BW72 106 aa13.12□□□□□ -0.31
KCTD13-202ENST00000561540 C3orf22Q8N5N4 141 aa13.12□□□□□ -0.31
KCTD13-202ENST00000561540 UBL5Q9BZL1 73 aa13.12□□□□□ -0.31
KCTD13-202ENST00000561540 ZNF861PO60384 105 aa13.09□□□□□ -0.31
KCTD13-202ENST00000561540 LCE2DQ5TA82 110 aaPredicted RBP13.08□□□□□ -0.32
KCTD13-202ENST00000561540 KIAA1109Q2LD37 5005 aa13.07□□□□□ -0.32
KCTD13-202ENST00000561540 RPL37AP61513 92 aaKnown RBP13.07□□□□□ -0.32
KCTD13-202ENST00000561540 SMIM29Q86T20 159 aa13.07□□□□□ -0.32
KCTD13-202ENST00000561540 ATP5EP2Q5VTU8 51 aa13.05□□□□□ -0.32
KCTD13-202ENST00000561540 IGKV3D-7A0A0C4DH55 119 aa13.04□□□□□ -0.32
KCTD13-202ENST00000561540 KRTAP10-4P60372 401 aaPredicted RBP13.02□□□□□ -0.32
KCTD13-202ENST00000561540 Q6ZVQ6 151 aa13.02□□□□□ -0.32
KCTD13-202ENST00000561540 F8WEM9 126 aa13.01□□□□□ -0.33
KCTD13-202ENST00000561540 SPRR1BP22528 89 aa13.01□□□□□ -0.33
KCTD13-202ENST00000561540 A0A1B0GW54 56 aa12.99□□□□□ -0.33
KCTD13-202ENST00000561540 IGLV8-61A0A075B6I0 122 aa12.96□□□□□ -0.34
KCTD13-202ENST00000561540 A0A1W2PNM2 257 aa12.96□□□□□ -0.34
KCTD13-202ENST00000561540 Q8NBF4 154 aa12.96□□□□□ -0.34
KCTD13-202ENST00000561540 FAM236AA0A1B0GUQ0 79 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 FAM236BA0A1B0GV22 79 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 FAM229AH3BQW9 127 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 SPRR4Q96PI1 79 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 ANAPC13Q9BS18 74 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
KCTD13-202ENST00000561540 BIRC6Q9NR09 4857 aa12.92□□□□□ -0.34
KCTD13-202ENST00000561540 PLA2G1BP04054 148 aaKnown RBP12.92□□□□□ -0.34
KCTD13-202ENST00000561540 CXCL6P80162 114 aa12.92□□□□□ -0.34
KCTD13-202ENST00000561540 ZNF706Q9Y5V0 76 aaPredicted RBP12.92□□□□□ -0.34
KCTD13-202ENST00000561540 Q5VSD8 79 aa12.91□□□□□ -0.34
KCTD13-202ENST00000561540 PKHD1L1Q86WI1 4243 aa12.91□□□□□ -0.34
KCTD13-202ENST00000561540 IGFL1Q6UW32 110 aa12.9□□□□□ -0.34
KCTD13-202ENST00000561540 SPINK6Q6UWN8 80 aa12.9□□□□□ -0.34
KCTD13-202ENST00000561540 HIST1H4AP62805 103 aaKnown RBP12.89□□□□□ -0.35
KCTD13-202ENST00000561540 LINC00483Q53H64 154 aa12.89□□□□□ -0.35
KCTD13-202ENST00000561540 NREPQ16612 68 aa12.89□□□□□ -0.35
KCTD13-202ENST00000561540 A0A087WVE0 104 aa12.88□□□□□ -0.35
KCTD13-202ENST00000561540 CRYGAP11844 174 aa12.86□□□□□ -0.35
KCTD13-202ENST00000561540 Q8N1X5 172 aa12.86□□□□□ -0.35
KCTD13-202ENST00000561540 ANAPC11Q9NYG5 84 aa12.83□□□□□ -0.36
KCTD13-202ENST00000561540 KRTAP1-4P0C5Y4 121 aa12.82□□□□□ -0.36
KCTD13-202ENST00000561540 A0A0G2JQZ4 141 aa12.81□□□□□ -0.36
KCTD13-202ENST00000561540 ATOX1O00244 68 aa12.78□□□□□ -0.36
KCTD13-202ENST00000561540 BPY2O14599 106 aa12.77□□□□□ -0.36
KCTD13-202ENST00000561540 KRTAP3-3Q9BYR6 98 aa12.76□□□□□ -0.37
KCTD13-202ENST00000561540 KRTAP3-2Q9BYR7 98 aa12.76□□□□□ -0.37
KCTD13-202ENST00000561540 FAM229BQ4G0N7 80 aa12.75□□□□□ -0.37
KCTD13-202ENST00000561540 A0A087X002 238 aa12.73□□□□□ -0.37
KCTD13-202ENST00000561540 A0A087WSZ3 146 aa12.72□□□□□ -0.37
KCTD13-202ENST00000561540 IGLV9-49A0A0B4J1Y8 123 aa12.71□□□□□ -0.37
KCTD13-202ENST00000561540 HERC2O95714 4834 aa12.71□□□□□ -0.37
KCTD13-202ENST00000561540 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
KCTD13-202ENST00000561540 IGKV4-1P06312 121 aa12.69□□□□□ -0.38
KCTD13-202ENST00000561540 KRTAP13-2Q52LG2 175 aa12.69□□□□□ -0.38
KCTD13-202ENST00000561540 MOBPQ13875 183 aa12.67□□□□□ -0.38
KCTD13-202ENST00000561540 CCDC179H3BU77 68 aa12.66□□□□□ -0.38
KCTD13-202ENST00000561540 Q8N9L7 120 aa12.66□□□□□ -0.38
KCTD13-202ENST00000561540 KRTAP4-5Q9BYR2 181 aa12.65□□□□□ -0.38
KCTD13-202ENST00000561540 LRP1Q07954 4544 aaKnown RBP12.63□□□□□ -0.39
KCTD13-202ENST00000561540 DSCR10P59022 87 aa12.63□□□□□ -0.39
KCTD13-202ENST00000561540 COX7CP15954 63 aa12.62□□□□□ -0.39
KCTD13-202ENST00000561540 FAT3Q8TDW7 4589 aa12.62□□□□□ -0.39
KCTD13-202ENST00000561540 UQCRQO14949 82 aa12.61□□□□□ -0.39
KCTD13-202ENST00000561540 SERP2Q8N6R1 65 aa12.61□□□□□ -0.39
KCTD13-202ENST00000561540 PRR26Q8N8Z3 221 aa12.61□□□□□ -0.39
KCTD13-202ENST00000561540 FLG2Q5D862 2391 aaPredicted RBP12.61□□□□□ -0.39
KCTD13-202ENST00000561540 SSBP3-AS1Q7Z2R9 100 aa12.6□□□□□ -0.39
KCTD13-202ENST00000561540 MYCBP2O75592 4640 aa12.56□□□□□ -0.4
KCTD13-202ENST00000561540 TYMSOSQ8TAI1 123 aa12.56□□□□□ -0.4
KCTD13-202ENST00000561540 K7EQZ3 153 aa12.55□□□□□ -0.4
KCTD13-202ENST00000561540 DEFB116Q30KQ4 102 aa12.55□□□□□ -0.4
KCTD13-202ENST00000561540 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
KCTD13-202ENST00000561540 LINC00472Q9H8W2 130 aa12.55□□□□□ -0.4
KCTD13-202ENST00000561540 TNXBP22105 4242 aa12.53□□□□□ -0.4
KCTD13-202ENST00000561540 ABCA13Q86UQ4 5058 aa12.52□□□□□ -0.41
KCTD13-202ENST00000561540 HRCT1Q6UXD1 115 aa12.51□□□□□ -0.41
KCTD13-202ENST00000561540 TRAV7A0A075B6U4 112 aa12.51□□□□□ -0.41
KCTD13-202ENST00000561540 SS18L2Q9UHA2 77 aa12.51□□□□□ -0.41
KCTD13-202ENST00000561540 CD164Q04900 197 aa12.48□□□□□ -0.41
KCTD13-202ENST00000561540 J3KT08 172 aa12.47□□□□□ -0.41
KCTD13-202ENST00000561540 KRTAP10-8P60410 259 aa12.47□□□□□ -0.41
KCTD13-202ENST00000561540 A8MWP4 228 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms