RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
HERC1-212ENST00000561348 TRBV7-6A0A0J9YX20 115 aa5.83□□□□□ -1.48
HERC1-212ENST00000561348 FXYD2P54710 66 aa5.83□□□□□ -1.48
HERC1-212ENST00000561348 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
HERC1-212ENST00000561348 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
HERC1-212ENST00000561348 NHP2Q9NX24 153 aaKnown RBP5.82□□□□□ -1.48
HERC1-212ENST00000561348 IGLV7-46A0A075B6I9 117 aa5.81□□□□□ -1.48
HERC1-212ENST00000561348 TEX49A0A1B0GTD5 131 aa5.81□□□□□ -1.48
HERC1-212ENST00000561348 H3BUT2 72 aa5.81□□□□□ -1.48
HERC1-212ENST00000561348 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
HERC1-212ENST00000561348 SPINK1P00995 79 aa5.8□□□□□ -1.48
HERC1-212ENST00000561348 A0A1W2PPM0 123 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 K7EP34 96 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 CFC1BP0CG36 223 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 CFC1P0CG37 223 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 FABP2P12104 132 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 LRP2P98164 4655 aa5.79□□□□□ -1.48
HERC1-212ENST00000561348 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 SPRR1BP22528 89 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 LINC00575Q6W349 94 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 SPCS1Q9Y6A9 102 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 LPAP08519 4548 aa5.78□□□□□ -1.48
HERC1-212ENST00000561348 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
HERC1-212ENST00000561348 F8WEM9 126 aa5.77□□□□□ -1.49
HERC1-212ENST00000561348 Q6ZQY7 126 aa5.77□□□□□ -1.49
HERC1-212ENST00000561348 NAA38Q9BRA0 125 aaKnown RBP5.77□□□□□ -1.49
HERC1-212ENST00000561348 K7ERJ3 54 aa5.76□□□□□ -1.49
HERC1-212ENST00000561348 Q8N377 158 aa5.76□□□□□ -1.49
HERC1-212ENST00000561348 A0A0B4J2C4 111 aa5.75□□□□□ -1.49
HERC1-212ENST00000561348 SNCGO76070 127 aa5.75□□□□□ -1.49
HERC1-212ENST00000561348 LINC01547P58512 204 aaPredicted RBP5.75□□□□□ -1.49
HERC1-212ENST00000561348 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
HERC1-212ENST00000561348 IGLV5-48A0A075B6I7 105 aa5.74□□□□□ -1.49
HERC1-212ENST00000561348 PSMB2P49721 201 aa5.74□□□□□ -1.49
HERC1-212ENST00000561348 SMIM29Q86T20 159 aa5.74□□□□□ -1.49
HERC1-212ENST00000561348 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
HERC1-212ENST00000561348 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
HERC1-212ENST00000561348 H0YGX0 51 aa5.71□□□□□ -1.5
HERC1-212ENST00000561348 K7ERU9 68 aa5.71□□□□□ -1.5
HERC1-212ENST00000561348 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.71□□□□□ -1.5
HERC1-212ENST00000561348 FP248Q71RG6 208 aaPredicted RBP5.71□□□□□ -1.5
HERC1-212ENST00000561348 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
HERC1-212ENST00000561348 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
HERC1-212ENST00000561348 OCIAD2Q56VL3 154 aa5.7□□□□□ -1.5
HERC1-212ENST00000561348 FAM218AQ96MZ4 157 aa5.7□□□□□ -1.5
HERC1-212ENST00000561348 F8W1H4 67 aa5.69□□□□□ -1.5
HERC1-212ENST00000561348 TRIAP1O43715 76 aa5.69□□□□□ -1.5
HERC1-212ENST00000561348 CLEC2BQ92478 149 aa5.69□□□□□ -1.5
HERC1-212ENST00000561348 A0A1B0GV72 72 aa5.67□□□□□ -1.5
HERC1-212ENST00000561348 COX6CP09669 75 aa5.67□□□□□ -1.5
HERC1-212ENST00000561348 SCGB1C2P0DMR2 95 aa5.67□□□□□ -1.5
HERC1-212ENST00000561348 RNF213Q63HN8 5207 aa5.67□□□□□ -1.5
HERC1-212ENST00000561348 TRBV20-1A0A075B6N2 111 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 C9orf92A6NGG3 77 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 H3BMG7 143 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 DNAL4O96015 105 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 CD164Q04900 197 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
HERC1-212ENST00000561348 Q6JHZ5 121 aa5.65□□□□□ -1.5
HERC1-212ENST00000561348 IGFL1Q6UW32 110 aa5.65□□□□□ -1.5
HERC1-212ENST00000561348 TCL1BO95988 128 aa5.64□□□□□ -1.51
HERC1-212ENST00000561348 NDUFV3P56181 108 aaKnown RBP5.64□□□□□ -1.51
HERC1-212ENST00000561348 PPDPFLQ8WWR9 84 aa5.64□□□□□ -1.51
HERC1-212ENST00000561348 VPS25Q9BRG1 176 aa5.64□□□□□ -1.51
HERC1-212ENST00000561348 PRO0461Q9UI25 63 aa5.64□□□□□ -1.51
HERC1-212ENST00000561348 J3QR89 54 aa5.63□□□□□ -1.51
HERC1-212ENST00000561348 ORMDL1Q9P0S3 153 aa5.62□□□□□ -1.51
HERC1-212ENST00000561348 A0A1B0GX51 115 aa5.61□□□□□ -1.51
HERC1-212ENST00000561348 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
HERC1-212ENST00000561348 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
HERC1-212ENST00000561348 TRBV7-7A0A0K0K1E9 115 aa5.6□□□□□ -1.51
HERC1-212ENST00000561348 ATXN8Q156A1 80 aa5.6□□□□□ -1.51
HERC1-212ENST00000561348 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
HERC1-212ENST00000561348 MTURNQ8N3F0 131 aa5.6□□□□□ -1.51
HERC1-212ENST00000561348 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
HERC1-212ENST00000561348 C9JAW5 83 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 LST1O00453 97 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
HERC1-212ENST00000561348 Q5XG85 94 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 ANKRD29Q8N6D5 301 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
HERC1-212ENST00000561348 TMEM256-PLSCR3K7ERE1 68 aa5.56□□□□□ -1.52
HERC1-212ENST00000561348 A0A087WSZ3 146 aa5.55□□□□□ -1.52
HERC1-212ENST00000561348 A0A0U1RQV1 116 aa5.55□□□□□ -1.52
HERC1-212ENST00000561348 H3BT86 120 aa5.54□□□□□ -1.52
HERC1-212ENST00000561348 TRACP01848 142 aa5.54□□□□□ -1.52
HERC1-212ENST00000561348 PCP4P48539 62 aa5.54□□□□□ -1.52
HERC1-212ENST00000561348 SS18L2Q9UHA2 77 aa5.54□□□□□ -1.52
HERC1-212ENST00000561348 H3BQ85 93 aa5.53□□□□□ -1.52
HERC1-212ENST00000561348 BAALC-AS2P0C853 105 aa5.53□□□□□ -1.52
HERC1-212ENST00000561348 ASB16-AS1Q495Z4 193 aa5.53□□□□□ -1.52
HERC1-212ENST00000561348 PCOTHQ58A44 107 aa5.52□□□□□ -1.53
HERC1-212ENST00000561348 MUC2Q02817 5179 aa5.51□□□□□ -1.53
HERC1-212ENST00000561348 A0A1W2PNM2 257 aa5.51□□□□□ -1.53
HERC1-212ENST00000561348 CCKP06307 115 aa5.51□□□□□ -1.53
HERC1-212ENST00000561348 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
HERC1-212ENST00000561348 OBSCN-AS1Q96MR7 158 aa5.51□□□□□ -1.53
HERC1-212ENST00000561348 SIGMAR1Q99720 223 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms