RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 S100A4P26447 101 aaKnown RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 RPL27AP46776 148 aaKnown RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 RPL28P46779 137 aaKnown RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 ZNF80P51504 273 aaPredicted RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 ESPL1Q14674 2120 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 FAM229BQ4G0N7 80 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 PCOTHQ58A44 107 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 ENHOQ6UWT2 76 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 LCA10Q71F78 164 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 VMO1Q7Z5L0 202 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 CNEP1R1Q8N9A8 125 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 CCL4L1Q8NHW4 92 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 TMEM167AQ8TBQ9 72 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 PATE1Q8WXA2 126 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 RPL39LQ96EH5 51 aaKnown RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 AMELXQ99217 191 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 SMR3AQ99954 134 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 KRTAP2-4Q9BYR9 128 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 C14orf132Q9NPU4 83 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 LINC00846Q9NV44 126 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 NDUFA12Q9UI09 145 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 CCL26Q9Y258 94 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 LINC00588Q9Y4M8 146 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 PKHD1P08F94 4074 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 INTS1Q8N201 2190 aaKnown RBP0.87□□□□□ -2.27
USP8-216ENST00000561206 USF3Q68DE3 2245 aa0.87□□□□□ -2.27
USP8-216ENST00000561206 DYNC1H1Q14204 4646 aaKnown RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 MED12Q93074 2177 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 CEP192Q8TEP8 1941 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 DSCAML1Q8TD84 2053 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 A0A1B0GW54 56 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 H3BPC8 53 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 BUB1B-PAK6H3BSN5 160 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 M0R378 163 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 NCR3O14931 201 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 ERC2-IT1O76042 136 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 CRPP02741 224 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 RNASE4P34096 147 aaKnown RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 WT1-ASQ06250 92 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 NREPQ16612 68 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 Q1T7F1 81 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 C10orf55Q5SWW7 151 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 ZNF833PQ6ZTB9 187 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 C7orf65Q6ZTY9 151 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 Q8N2B8 174 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 Q8N6K4 173 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 SPTSSBQ8NFR3 76 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 Q8TAT8 98 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 TMEM254Q8TBM7 123 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 LINC00308Q8TCZ7 52 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 LEAP2Q969E1 77 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 ZNF625Q96I27 306 aaPredicted RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 BPESC1Q9GZL8 116 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 MRPL36Q9P0J6 103 aaKnown RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 ORMDL1Q9P0S3 153 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 HSPG2P98160 4391 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 KNTC1P50748 2209 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 DIDO1Q9BTC0 2240 aaKnown RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 TNRC6BQ9UPQ9 1833 aaKnown RBP0.86□□□□□ -2.27
USP8-216ENST00000561206 POLEQ07864 2286 aa0.86□□□□□ -2.27
USP8-216ENST00000561206 DNAH9Q9NYC9 4486 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 TRAV10A0A0B4J240 114 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 TRAV22A0A0B4J277 110 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 IGHV1-18A0A0C4DH31 117 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 TRBV7-4A0A0J9YYF1 115 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 TRBV6-5A0A0K0K1A5 114 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 hDV103S1A0JD37 113 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 HCG22E2RYF7 251 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 CHKB-CPT1BH3BT56 60 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 I3L2K1 104 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 NDUFA1O15239 70 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 TFF1P04155 84 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 CCL3P10147 92 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 PDE6GP18545 87 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 POLR2KP53803 58 aaKnown RBP0.85□□□□□ -2.27
USP8-216ENST00000561206 RPL39P62891 51 aaKnown RBP0.85□□□□□ -2.27
USP8-216ENST00000561206 HAMPP81172 84 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 ACACAQ13085 2346 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 ATP11AUNQ6ZP68 121 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 PHF5AQ7RTV0 110 aaKnown RBP0.85□□□□□ -2.27
USP8-216ENST00000561206 LINC00269Q8N2A0 174 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 WFDC9Q8NEX5 89 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 OBSCN-AS1Q96MR7 158 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 LIMD2Q9BT23 127 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 C22orf24Q9Y442 160 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 LENEPQ9Y5L5 61 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 SDK1Q7Z5N4 2213 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 MUC22E2RYF6 1773 aaPredicted RBP0.85□□□□□ -2.27
USP8-216ENST00000561206 PI4KAP42356 2102 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 ZGRF1Q86YA3 2104 aa0.85□□□□□ -2.27
USP8-216ENST00000561206 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
USP8-216ENST00000561206 DSCAMO60469 2012 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 FAT2Q9NYQ8 4349 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 ASCC3Q8N3C0 2202 aaKnown RBP0.84□□□□□ -2.27
USP8-216ENST00000561206 TRBV6-8A0A0A6YYG3 113 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 TRBV10-1A0A0K0K1A3 114 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 A0A1B0GU33 70 aa0.84□□□□□ -2.27
USP8-216ENST00000561206 IGKV2-29A2NJV5 120 aaPredicted RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms