RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 A6NJY4 79 aa7.27□□□□□ -1.25
CTDSPL2-209ENST00000560620 A0A0G2JQZ4 141 aa7.26□□□□□ -1.25
CTDSPL2-209ENST00000560620 SNCGO76070 127 aa7.26□□□□□ -1.25
CTDSPL2-209ENST00000560620 CD164Q04900 197 aa7.26□□□□□ -1.25
CTDSPL2-209ENST00000560620 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
CTDSPL2-209ENST00000560620 CEND1Q8N111 149 aa7.26□□□□□ -1.25
CTDSPL2-209ENST00000560620 MUC2Q02817 5179 aa7.25□□□□□ -1.25
CTDSPL2-209ENST00000560620 A0A0B4J2C4 111 aa7.25□□□□□ -1.25
CTDSPL2-209ENST00000560620 SVIPQ8NHG7 77 aa7.25□□□□□ -1.25
CTDSPL2-209ENST00000560620 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
CTDSPL2-209ENST00000560620 LOC105371267A0A1B0GV96 52 aa7.24□□□□□ -1.25
CTDSPL2-209ENST00000560620 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.24□□□□□ -1.25
CTDSPL2-209ENST00000560620 SNHG12Q9BXW3 62 aa7.23□□□□□ -1.25
CTDSPL2-209ENST00000560620 PRO1854Q9UHT4 67 aa7.23□□□□□ -1.25
CTDSPL2-209ENST00000560620 H0YGX0 51 aa7.21□□□□□ -1.26
CTDSPL2-209ENST00000560620 FXYD2P54710 66 aa7.2□□□□□ -1.26
CTDSPL2-209ENST00000560620 TCL1BO95988 128 aa7.19□□□□□ -1.26
CTDSPL2-209ENST00000560620 HSD52Q0P140 79 aa7.19□□□□□ -1.26
CTDSPL2-209ENST00000560620 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
CTDSPL2-209ENST00000560620 Q6JHZ5 121 aa7.19□□□□□ -1.26
CTDSPL2-209ENST00000560620 PPDPFLQ8WWR9 84 aa7.19□□□□□ -1.26
CTDSPL2-209ENST00000560620 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
CTDSPL2-209ENST00000560620 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
CTDSPL2-209ENST00000560620 CLEC2BQ92478 149 aa7.18□□□□□ -1.26
CTDSPL2-209ENST00000560620 PSMB2P49721 201 aa7.17□□□□□ -1.26
CTDSPL2-209ENST00000560620 FAM218AQ96MZ4 157 aa7.17□□□□□ -1.26
CTDSPL2-209ENST00000560620 UQCR10Q9UDW1 63 aa7.17□□□□□ -1.26
CTDSPL2-209ENST00000560620 XP32Q5T750 250 aa7.16□□□□□ -1.26
CTDSPL2-209ENST00000560620 Q5XG85 94 aa7.16□□□□□ -1.26
CTDSPL2-209ENST00000560620 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
CTDSPL2-209ENST00000560620 H3BUT2 72 aa7.15□□□□□ -1.26
CTDSPL2-209ENST00000560620 K7ERJ3 54 aa7.15□□□□□ -1.26
CTDSPL2-209ENST00000560620 TRIAP1O43715 76 aa7.15□□□□□ -1.26
CTDSPL2-209ENST00000560620 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
CTDSPL2-209ENST00000560620 C1orf195Q5TG92 126 aa7.15□□□□□ -1.26
CTDSPL2-209ENST00000560620 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
CTDSPL2-209ENST00000560620 GHRHP01286 108 aa7.14□□□□□ -1.27
CTDSPL2-209ENST00000560620 FABP2P12104 132 aa7.14□□□□□ -1.27
CTDSPL2-209ENST00000560620 TRBV7-7A0A0K0K1E9 115 aa7.12□□□□□ -1.27
CTDSPL2-209ENST00000560620 A0A1B0GX51 115 aa7.12□□□□□ -1.27
CTDSPL2-209ENST00000560620 DNAL4O96015 105 aa7.12□□□□□ -1.27
CTDSPL2-209ENST00000560620 COX6CP09669 75 aa7.12□□□□□ -1.27
CTDSPL2-209ENST00000560620 NDUFV3P56181 108 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-209ENST00000560620 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
CTDSPL2-209ENST00000560620 H3BMG7 143 aa7.09□□□□□ -1.27
CTDSPL2-209ENST00000560620 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
CTDSPL2-209ENST00000560620 A0A1B0GV72 72 aa7.06□□□□□ -1.28
CTDSPL2-209ENST00000560620 LST1O00453 97 aa7.06□□□□□ -1.28
CTDSPL2-209ENST00000560620 SCGB1C2P0DMR2 95 aa7.06□□□□□ -1.28
CTDSPL2-209ENST00000560620 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
CTDSPL2-209ENST00000560620 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
CTDSPL2-209ENST00000560620 TEN1Q86WV5 123 aa7.05□□□□□ -1.28
CTDSPL2-209ENST00000560620 SS18L2Q9UHA2 77 aa7.05□□□□□ -1.28
CTDSPL2-209ENST00000560620 H3BQ85 93 aa7.03□□□□□ -1.28
CTDSPL2-209ENST00000560620 Q6Q795 121 aa7.03□□□□□ -1.28
CTDSPL2-209ENST00000560620 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
CTDSPL2-209ENST00000560620 A0A087WSZ3 146 aa7.02□□□□□ -1.29
CTDSPL2-209ENST00000560620 TMEM256-PLSCR3K7ERE1 68 aa7.02□□□□□ -1.29
CTDSPL2-209ENST00000560620 M0R143 59 aa7.01□□□□□ -1.29
CTDSPL2-209ENST00000560620 ANKRD29Q8N6D5 301 aa7.01□□□□□ -1.29
CTDSPL2-209ENST00000560620 SMIM6P0DI80 62 aa7□□□□□ -1.29
CTDSPL2-209ENST00000560620 OBSCN-AS1Q96MR7 158 aa6.99□□□□□ -1.29
CTDSPL2-209ENST00000560620 TRACP01848 142 aa6.98□□□□□ -1.29
CTDSPL2-209ENST00000560620 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-209ENST00000560620 A0A1W2PNM2 257 aa6.97□□□□□ -1.29
CTDSPL2-209ENST00000560620 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
CTDSPL2-209ENST00000560620 NAA38Q9BRA0 125 aaKnown RBP6.96□□□□□ -1.3
CTDSPL2-209ENST00000560620 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
CTDSPL2-209ENST00000560620 CCKP06307 115 aa6.95□□□□□ -1.3
CTDSPL2-209ENST00000560620 UBE2V1Q13404 147 aa6.95□□□□□ -1.3
CTDSPL2-209ENST00000560620 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
CTDSPL2-209ENST00000560620 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
CTDSPL2-209ENST00000560620 Q96NJ1 140 aa6.94□□□□□ -1.3
CTDSPL2-209ENST00000560620 SIGMAR1Q99720 223 aa6.94□□□□□ -1.3
CTDSPL2-209ENST00000560620 BATFQ16520 125 aa6.93□□□□□ -1.3
CTDSPL2-209ENST00000560620 PCP4L1A6NKN8 68 aa6.92□□□□□ -1.3
CTDSPL2-209ENST00000560620 BAALC-AS2P0C853 105 aa6.92□□□□□ -1.3
CTDSPL2-209ENST00000560620 RBM3P98179 157 aaKnown RBP6.92□□□□□ -1.3
CTDSPL2-209ENST00000560620 ATP11AUNQ6ZP68 121 aa6.92□□□□□ -1.3
CTDSPL2-209ENST00000560620 DSCR8Q96T75 97 aa6.92□□□□□ -1.3
CTDSPL2-209ENST00000560620 ATXN8Q156A1 80 aa6.91□□□□□ -1.3
CTDSPL2-209ENST00000560620 IGKV4-1P06312 121 aa6.9□□□□□ -1.3
CTDSPL2-209ENST00000560620 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
CTDSPL2-209ENST00000560620 Q75L30 129 aa6.88□□□□□ -1.31
CTDSPL2-209ENST00000560620 C9JAW5 83 aa6.87□□□□□ -1.31
CTDSPL2-209ENST00000560620 DSCR10P59022 87 aa6.87□□□□□ -1.31
CTDSPL2-209ENST00000560620 LYRM7Q5U5X0 104 aa6.87□□□□□ -1.31
CTDSPL2-209ENST00000560620 LINC00313P59037 77 aa6.85□□□□□ -1.31
CTDSPL2-209ENST00000560620 COX6B2Q6YFQ2 88 aa6.85□□□□□ -1.31
CTDSPL2-209ENST00000560620 JMJD7-PLA2G4BH0Y9G9 81 aa6.83□□□□□ -1.32
CTDSPL2-209ENST00000560620 TRBV20-1A0A075B6N2 111 aa6.82□□□□□ -1.32
CTDSPL2-209ENST00000560620 IGHV6-1A0A0B4J1U7 121 aa6.82□□□□□ -1.32
CTDSPL2-209ENST00000560620 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
CTDSPL2-209ENST00000560620 LINC00472Q9H8W2 130 aa6.82□□□□□ -1.32
CTDSPL2-209ENST00000560620 PCP4P48539 62 aa6.81□□□□□ -1.32
CTDSPL2-209ENST00000560620 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
CTDSPL2-209ENST00000560620 LCE2CQ5TA81 110 aa6.81□□□□□ -1.32
CTDSPL2-209ENST00000560620 A8MUU9 505 aa6.8□□□□□ -1.32
CTDSPL2-209ENST00000560620 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
CTDSPL2-209ENST00000560620 C14orf132Q9NPU4 83 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms