RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PRR4Q16378 134 aa9.62□□□□□ -0.87
RPL28-209ENST00000560055 TRIAP1O43715 76 aa9.61□□□□□ -0.87
RPL28-209ENST00000560055 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
RPL28-209ENST00000560055 A0A1B0GX51 115 aa9.57□□□□□ -0.88
RPL28-209ENST00000560055 PPDPFLQ8WWR9 84 aa9.57□□□□□ -0.88
RPL28-209ENST00000560055 TSTD3H0UI37 97 aa9.56□□□□□ -0.88
RPL28-209ENST00000560055 M0R143 59 aa9.55□□□□□ -0.88
RPL28-209ENST00000560055 SNCGO76070 127 aa9.55□□□□□ -0.88
RPL28-209ENST00000560055 CD164Q04900 197 aa9.54□□□□□ -0.88
RPL28-209ENST00000560055 OCIAD2Q56VL3 154 aa9.54□□□□□ -0.88
RPL28-209ENST00000560055 IGLV8-61A0A075B6I0 122 aa9.53□□□□□ -0.88
RPL28-209ENST00000560055 PSMB2P49721 201 aa9.53□□□□□ -0.88
RPL28-209ENST00000560055 CLEC2BQ92478 149 aa9.53□□□□□ -0.88
RPL28-209ENST00000560055 FP248Q71RG6 208 aaPredicted RBP9.52□□□□□ -0.89
RPL28-209ENST00000560055 A0A0G2JQZ4 141 aa9.51□□□□□ -0.89
RPL28-209ENST00000560055 F8WEM9 126 aa9.51□□□□□ -0.89
RPL28-209ENST00000560055 COX6CP09669 75 aa9.51□□□□□ -0.89
RPL28-209ENST00000560055 IGLV7-46A0A075B6I9 117 aa9.5□□□□□ -0.89
RPL28-209ENST00000560055 HRCT1Q6UXD1 115 aa9.5□□□□□ -0.89
RPL28-209ENST00000560055 Q6JHZ5 121 aa9.48□□□□□ -0.89
RPL28-209ENST00000560055 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
RPL28-209ENST00000560055 TPRXLQ17RH7 258 aa9.47□□□□□ -0.89
RPL28-209ENST00000560055 LIMD2Q9BT23 127 aa9.47□□□□□ -0.89
RPL28-209ENST00000560055 Q5XG85 94 aa9.46□□□□□ -0.9
RPL28-209ENST00000560055 IGFL1Q6UW32 110 aa9.46□□□□□ -0.9
RPL28-209ENST00000560055 GHRHP01286 108 aa9.45□□□□□ -0.9
RPL28-209ENST00000560055 LST1O00453 97 aa9.44□□□□□ -0.9
RPL28-209ENST00000560055 DNAL4O96015 105 aa9.44□□□□□ -0.9
RPL28-209ENST00000560055 NDUFV3P56181 108 aaKnown RBP9.44□□□□□ -0.9
RPL28-209ENST00000560055 H3BUT2 72 aa9.43□□□□□ -0.9
RPL28-209ENST00000560055 SCGB1C2P0DMR2 95 aa9.43□□□□□ -0.9
RPL28-209ENST00000560055 TRACP01848 142 aa9.42□□□□□ -0.9
RPL28-209ENST00000560055 ORMDL1Q9P0S3 153 aa9.42□□□□□ -0.9
RPL28-209ENST00000560055 H3BQ85 93 aa9.41□□□□□ -0.9
RPL28-209ENST00000560055 FABP2P12104 132 aa9.41□□□□□ -0.9
RPL28-209ENST00000560055 MUC17Q685J3 4493 aa9.41□□□□□ -0.9
RPL28-209ENST00000560055 KRTAP13-3Q3SY46 172 aa9.4□□□□□ -0.9
RPL28-209ENST00000560055 NAA38Q9BRA0 125 aaKnown RBP9.39□□□□□ -0.91
RPL28-209ENST00000560055 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
RPL28-209ENST00000560055 H3BMG7 143 aa9.38□□□□□ -0.91
RPL28-209ENST00000560055 TMEM256-PLSCR3K7ERE1 68 aa9.38□□□□□ -0.91
RPL28-209ENST00000560055 BATFQ16520 125 aa9.38□□□□□ -0.91
RPL28-209ENST00000560055 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
RPL28-209ENST00000560055 Q6Q795 121 aa9.36□□□□□ -0.91
RPL28-209ENST00000560055 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
RPL28-209ENST00000560055 TCL1BO95988 128 aa9.35□□□□□ -0.91
RPL28-209ENST00000560055 UBE2V1Q13404 147 aa9.34□□□□□ -0.91
RPL28-209ENST00000560055 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
RPL28-209ENST00000560055 MUC2Q02817 5179 aa9.34□□□□□ -0.91
RPL28-209ENST00000560055 ATXN8Q156A1 80 aa9.32□□□□□ -0.92
RPL28-209ENST00000560055 TAX1BP3O14907 124 aa9.31□□□□□ -0.92
RPL28-209ENST00000560055 TEN1Q86WV5 123 aa9.31□□□□□ -0.92
RPL28-209ENST00000560055 C9orf118A6NHY6 69 aa9.3□□□□□ -0.92
RPL28-209ENST00000560055 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
RPL28-209ENST00000560055 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
RPL28-209ENST00000560055 BAALC-AS2P0C853 105 aa9.28□□□□□ -0.92
RPL28-209ENST00000560055 TRBV20-1A0A075B6N2 111 aa9.27□□□□□ -0.93
RPL28-209ENST00000560055 A0A1B0GV72 72 aa9.27□□□□□ -0.93
RPL28-209ENST00000560055 ANKRD29Q8N6D5 301 aa9.27□□□□□ -0.93
RPL28-209ENST00000560055 A0A087WSZ3 146 aa9.24□□□□□ -0.93
RPL28-209ENST00000560055 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
RPL28-209ENST00000560055 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
RPL28-209ENST00000560055 SS18L2Q9UHA2 77 aa9.24□□□□□ -0.93
RPL28-209ENST00000560055 XP32Q5T750 250 aa9.23□□□□□ -0.93
RPL28-209ENST00000560055 RBM3P98179 157 aaKnown RBP9.22□□□□□ -0.93
RPL28-209ENST00000560055 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
RPL28-209ENST00000560055 C9JAW5 83 aa9.19□□□□□ -0.94
RPL28-209ENST00000560055 CCKP06307 115 aa9.19□□□□□ -0.94
RPL28-209ENST00000560055 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
RPL28-209ENST00000560055 DSCR8Q96T75 97 aa9.19□□□□□ -0.94
RPL28-209ENST00000560055 Q96NJ1 140 aa9.18□□□□□ -0.94
RPL28-209ENST00000560055 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
RPL28-209ENST00000560055 OBSCN-AS1Q96MR7 158 aa9.14□□□□□ -0.95
RPL28-209ENST00000560055 FAT4Q6V0I7 4981 aa9.13□□□□□ -0.95
RPL28-209ENST00000560055 PCP4L1A6NKN8 68 aa9.13□□□□□ -0.95
RPL28-209ENST00000560055 SEC61BP60468 96 aaKnown RBP9.13□□□□□ -0.95
RPL28-209ENST00000560055 LOC110117498A0A087WWA1 95 aa9.12□□□□□ -0.95
RPL28-209ENST00000560055 H3BT86 120 aa9.12□□□□□ -0.95
RPL28-209ENST00000560055 Q6ZQT0 140 aa9.12□□□□□ -0.95
RPL28-209ENST00000560055 SPCS1Q9Y6A9 102 aa9.12□□□□□ -0.95
RPL28-209ENST00000560055 VPS25Q9BRG1 176 aa9.11□□□□□ -0.95
RPL28-209ENST00000560055 MTURNQ8N3F0 131 aa9.1□□□□□ -0.95
RPL28-209ENST00000560055 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
RPL28-209ENST00000560055 PDE6GP18545 87 aa9.08□□□□□ -0.96
RPL28-209ENST00000560055 C14orf132Q9NPU4 83 aa9.08□□□□□ -0.96
RPL28-209ENST00000560055 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
RPL28-209ENST00000560055 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
RPL28-209ENST00000560055 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
RPL28-209ENST00000560055 A0A1B0GW54 56 aa9.05□□□□□ -0.96
RPL28-209ENST00000560055 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
RPL28-209ENST00000560055 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
RPL28-209ENST00000560055 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
RPL28-209ENST00000560055 K7EP34 96 aa9.03□□□□□ -0.96
RPL28-209ENST00000560055 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
RPL28-209ENST00000560055 LCE2AQ5TA79 106 aaPredicted RBP9.03□□□□□ -0.96
RPL28-209ENST00000560055 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
RPL28-209ENST00000560055 PCOTHQ58A44 107 aa9.02□□□□□ -0.97
RPL28-209ENST00000560055 PRO0461Q9UI25 63 aa9.01□□□□□ -0.97
RPL28-209ENST00000560055 Q75L30 129 aa8.99□□□□□ -0.97
RPL28-209ENST00000560055 DSCR10P59022 87 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms