RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 Q6ZR54 194 aa9.07□□□□□ -0.96
RABGGTA-212ENST00000559974 SMIM29Q86T20 159 aa9.06□□□□□ -0.96
RABGGTA-212ENST00000559974 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
RABGGTA-212ENST00000559974 BCE1O60756 84 aa9.06□□□□□ -0.96
RABGGTA-212ENST00000559974 Q8NBF4 154 aa9.06□□□□□ -0.96
RABGGTA-212ENST00000559974 KRTAP11-1Q8IUC1 163 aa9.05□□□□□ -0.96
RABGGTA-212ENST00000559974 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
RABGGTA-212ENST00000559974 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
RABGGTA-212ENST00000559974 F8WEM9 126 aa9.03□□□□□ -0.96
RABGGTA-212ENST00000559974 SPRR4Q96PI1 79 aa9.03□□□□□ -0.96
RABGGTA-212ENST00000559974 H0Y9J4 135 aa9.03□□□□□ -0.96
RABGGTA-212ENST00000559974 BPY2O14599 106 aa9.02□□□□□ -0.97
RABGGTA-212ENST00000559974 PKD1P98161 4303 aa9.02□□□□□ -0.97
RABGGTA-212ENST00000559974 HECTD4Q9Y4D8 3996 aa9.01□□□□□ -0.97
RABGGTA-212ENST00000559974 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
RABGGTA-212ENST00000559974 PANO1I0J062 215 aa9.01□□□□□ -0.97
RABGGTA-212ENST00000559974 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
RABGGTA-212ENST00000559974 A0A087WTM6 91 aa9□□□□□ -0.97
RABGGTA-212ENST00000559974 IGKV4-1P06312 121 aa9□□□□□ -0.97
RABGGTA-212ENST00000559974 TRAV7A0A075B6U4 112 aa8.99□□□□□ -0.97
RABGGTA-212ENST00000559974 Q8N9L7 120 aa8.99□□□□□ -0.97
RABGGTA-212ENST00000559974 CYSTM1Q9H1C7 97 aa8.99□□□□□ -0.97
RABGGTA-212ENST00000559974 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
RABGGTA-212ENST00000559974 SPACA4Q8TDM5 124 aa8.98□□□□□ -0.97
RABGGTA-212ENST00000559974 RTL8CO15255 209 aa8.97□□□□□ -0.97
RABGGTA-212ENST00000559974 UBE2AP49459 152 aa8.97□□□□□ -0.97
RABGGTA-212ENST00000559974 IGFL1Q6UW32 110 aa8.97□□□□□ -0.97
RABGGTA-212ENST00000559974 DPH3Q96FX2 82 aa8.97□□□□□ -0.97
RABGGTA-212ENST00000559974 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-212ENST00000559974 PKHD1P08F94 4074 aa8.96□□□□□ -0.98
RABGGTA-212ENST00000559974 SPRR1BP22528 89 aa8.95□□□□□ -0.98
RABGGTA-212ENST00000559974 C1orf134Q5TEV5 83 aa8.95□□□□□ -0.98
RABGGTA-212ENST00000559974 DNAH5Q8TE73 4624 aa8.94□□□□□ -0.98
RABGGTA-212ENST00000559974 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
RABGGTA-212ENST00000559974 KRTAP13-1Q8IUC0 172 aa8.93□□□□□ -0.98
RABGGTA-212ENST00000559974 C20orf197Q8N268 126 aa8.93□□□□□ -0.98
RABGGTA-212ENST00000559974 SRRM2Q9UQ35 2752 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-212ENST00000559974 TMEM258P61165 79 aa8.92□□□□□ -0.98
RABGGTA-212ENST00000559974 DSCR10P59022 87 aa8.89□□□□□ -0.99
RABGGTA-212ENST00000559974 A0A087WSZ3 146 aa8.87□□□□□ -0.99
RABGGTA-212ENST00000559974 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
RABGGTA-212ENST00000559974 K7EQZ3 153 aa8.85□□□□□ -0.99
RABGGTA-212ENST00000559974 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
RABGGTA-212ENST00000559974 IGLV5-52A0A0A0MRZ9 124 aa8.84□□□□□ -0.99
RABGGTA-212ENST00000559974 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
RABGGTA-212ENST00000559974 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
RABGGTA-212ENST00000559974 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
RABGGTA-212ENST00000559974 SNURFQ9Y675 71 aa8.82□□□□□ -1
RABGGTA-212ENST00000559974 EPPK1P58107 5090 aaKnown RBP8.82□□□□□ -1
RABGGTA-212ENST00000559974 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
RABGGTA-212ENST00000559974 H7BZZ5 65 aa8.81□□□□□ -1
RABGGTA-212ENST00000559974 PSORS1C2Q9UIG4 136 aa8.81□□□□□ -1
RABGGTA-212ENST00000559974 DEFB116Q30KQ4 102 aa8.8□□□□□ -1
RABGGTA-212ENST00000559974 LRP1BQ9NZR2 4599 aa8.8□□□□□ -1
RABGGTA-212ENST00000559974 J3KT08 172 aa8.79□□□□□ -1
RABGGTA-212ENST00000559974 TMEM254Q8TBM7 123 aa8.79□□□□□ -1
RABGGTA-212ENST00000559974 LINC00483Q53H64 154 aa8.79□□□□□ -1
RABGGTA-212ENST00000559974 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
RABGGTA-212ENST00000559974 A0A1B0GVY2 172 aa8.78□□□□□ -1
RABGGTA-212ENST00000559974 HCG22E2RYF7 251 aa8.78□□□□□ -1
RABGGTA-212ENST00000559974 RPS28P62857 69 aaKnown RBP8.78□□□□□ -1
RABGGTA-212ENST00000559974 NDUFC1O43677 76 aa8.77□□□□□ -1.01
RABGGTA-212ENST00000559974 FAM30AQ9NZY2 134 aa8.77□□□□□ -1.01
RABGGTA-212ENST00000559974 IGLV9-49A0A0B4J1Y8 123 aa8.76□□□□□ -1.01
RABGGTA-212ENST00000559974 FAM236DA0A1B0GTK5 79 aa8.76□□□□□ -1.01
RABGGTA-212ENST00000559974 FAM236CP0DP71 79 aa8.76□□□□□ -1.01
RABGGTA-212ENST00000559974 ZNF861PO60384 105 aa8.75□□□□□ -1.01
RABGGTA-212ENST00000559974 LINC00472Q9H8W2 130 aa8.75□□□□□ -1.01
RABGGTA-212ENST00000559974 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-212ENST00000559974 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
RABGGTA-212ENST00000559974 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
RABGGTA-212ENST00000559974 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-212ENST00000559974 A8MWP4 228 aa8.7□□□□□ -1.02
RABGGTA-212ENST00000559974 PRR15Q8IV56 129 aa8.7□□□□□ -1.02
RABGGTA-212ENST00000559974 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
RABGGTA-212ENST00000559974 KRTAP10-1P60331 282 aa8.69□□□□□ -1.02
RABGGTA-212ENST00000559974 IGLV7-43P04211 117 aa8.68□□□□□ -1.02
RABGGTA-212ENST00000559974 MOBPQ13875 183 aa8.68□□□□□ -1.02
RABGGTA-212ENST00000559974 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-212ENST00000559974 OXTP01178 125 aa8.67□□□□□ -1.02
RABGGTA-212ENST00000559974 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
RABGGTA-212ENST00000559974 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
RABGGTA-212ENST00000559974 C5orf47Q569G3 176 aa8.65□□□□□ -1.02
RABGGTA-212ENST00000559974 HRCT1Q6UXD1 115 aa8.65□□□□□ -1.02
RABGGTA-212ENST00000559974 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.02
RABGGTA-212ENST00000559974 CASC2Q6XLA1 102 aa8.64□□□□□ -1.03
RABGGTA-212ENST00000559974 Q96NJ1 140 aa8.64□□□□□ -1.03
RABGGTA-212ENST00000559974 SERP1Q9Y6X1 66 aa8.64□□□□□ -1.03
RABGGTA-212ENST00000559974 NDUFB1O75438 58 aa8.62□□□□□ -1.03
RABGGTA-212ENST00000559974 ZCCHC13Q8WW36 166 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-212ENST00000559974 HSPG2P98160 4391 aa8.6□□□□□ -1.03
RABGGTA-212ENST00000559974 Q6ZSA8 131 aa8.6□□□□□ -1.03
RABGGTA-212ENST00000559974 MMP24-AS1A0A0U1RRL7 71 aa8.59□□□□□ -1.03
RABGGTA-212ENST00000559974 KIAA1109Q2LD37 5005 aa8.58□□□□□ -1.04
RABGGTA-212ENST00000559974 FAT1Q14517 4588 aa8.58□□□□□ -1.04
RABGGTA-212ENST00000559974 MP68P56378 58 aa8.56□□□□□ -1.04
RABGGTA-212ENST00000559974 hDV103S1A0JD37 113 aa8.55□□□□□ -1.04
RABGGTA-212ENST00000559974 RYR1P21817 5038 aa8.54□□□□□ -1.04
RABGGTA-212ENST00000559974 A0A1B0GVX0 72 aa8.53□□□□□ -1.04
RABGGTA-212ENST00000559974 VPS13BQ7Z7G8 4022 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms