RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 PCP2Q8IVA1 136 aa8.04□□□□□ -1.12
IRF9-204ENST00000559229 F8WEM9 126 aa8.03□□□□□ -1.12
IRF9-204ENST00000559229 VAMP3Q15836 100 aa8.02□□□□□ -1.13
IRF9-204ENST00000559229 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
IRF9-204ENST00000559229 LINC00575Q6W349 94 aa8.01□□□□□ -1.13
IRF9-204ENST00000559229 Q6JHZ5 121 aa8□□□□□ -1.13
IRF9-204ENST00000559229 TRBV7-7A0A0K0K1E9 115 aa7.98□□□□□ -1.13
IRF9-204ENST00000559229 hADV29S1A0JD25 119 aa7.98□□□□□ -1.13
IRF9-204ENST00000559229 SNRPEP62304 92 aaKnown RBP7.98□□□□□ -1.13
IRF9-204ENST00000559229 Q6ZQY7 126 aa7.98□□□□□ -1.13
IRF9-204ENST00000559229 IGFL1Q6UW32 110 aa7.97□□□□□ -1.13
IRF9-204ENST00000559229 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
IRF9-204ENST00000559229 OCIAD2Q56VL3 154 aa7.96□□□□□ -1.14
IRF9-204ENST00000559229 ATP11AUNQ6ZP68 121 aa7.96□□□□□ -1.14
IRF9-204ENST00000559229 Q75L30 129 aa7.95□□□□□ -1.14
IRF9-204ENST00000559229 OBSCN-AS1Q96MR7 158 aa7.95□□□□□ -1.14
IRF9-204ENST00000559229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
IRF9-204ENST00000559229 Q6Q795 121 aa7.91□□□□□ -1.14
IRF9-204ENST00000559229 PPDPFLQ8WWR9 84 aa7.91□□□□□ -1.14
IRF9-204ENST00000559229 LST1O00453 97 aa7.89□□□□□ -1.15
IRF9-204ENST00000559229 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
IRF9-204ENST00000559229 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
IRF9-204ENST00000559229 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
IRF9-204ENST00000559229 HSBP1L1C9JCN9 74 aa7.87□□□□□ -1.15
IRF9-204ENST00000559229 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
IRF9-204ENST00000559229 Q96NJ1 140 aa7.86□□□□□ -1.15
IRF9-204ENST00000559229 USH2AO75445 5202 aa7.86□□□□□ -1.15
IRF9-204ENST00000559229 H3BUT2 72 aa7.85□□□□□ -1.15
IRF9-204ENST00000559229 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
IRF9-204ENST00000559229 HIST1H2BLQ99880 126 aa7.83□□□□□ -1.16
IRF9-204ENST00000559229 SS18L2Q9UHA2 77 aa7.83□□□□□ -1.16
IRF9-204ENST00000559229 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
IRF9-204ENST00000559229 C12orf57Q99622 126 aa7.82□□□□□ -1.16
IRF9-204ENST00000559229 A8MUU9 505 aa7.81□□□□□ -1.16
IRF9-204ENST00000559229 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
IRF9-204ENST00000559229 CFC1P0CG37 223 aa7.8□□□□□ -1.16
IRF9-204ENST00000559229 S100A2P29034 98 aa7.8□□□□□ -1.16
IRF9-204ENST00000559229 TEN1Q86WV5 123 aa7.8□□□□□ -1.16
IRF9-204ENST00000559229 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
IRF9-204ENST00000559229 TRBV20-1A0A075B6N2 111 aa7.78□□□□□ -1.16
IRF9-204ENST00000559229 SNCGO76070 127 aa7.77□□□□□ -1.17
IRF9-204ENST00000559229 FCGBPQ9Y6R7 5405 aaPredicted RBP7.77□□□□□ -1.17
IRF9-204ENST00000559229 NDUFV3P56181 108 aaKnown RBP7.76□□□□□ -1.17
IRF9-204ENST00000559229 A0A087WSZ3 146 aa7.75□□□□□ -1.17
IRF9-204ENST00000559229 H0YGX0 51 aa7.75□□□□□ -1.17
IRF9-204ENST00000559229 COX8AP10176 69 aa7.74□□□□□ -1.17
IRF9-204ENST00000559229 SYNE2Q8WXH0 6885 aaKnown RBP7.72□□□□□ -1.17
IRF9-204ENST00000559229 DLEU1O43261 78 aa7.72□□□□□ -1.17
IRF9-204ENST00000559229 RAB37Q96AX2 223 aa7.72□□□□□ -1.17
IRF9-204ENST00000559229 FAM218AQ96MZ4 157 aa7.72□□□□□ -1.17
IRF9-204ENST00000559229 H3BMG7 143 aa7.71□□□□□ -1.18
IRF9-204ENST00000559229 DSCR10P59022 87 aa7.71□□□□□ -1.18
IRF9-204ENST00000559229 GHRHP01286 108 aa7.7□□□□□ -1.18
IRF9-204ENST00000559229 A0A0B4J2C4 111 aa7.69□□□□□ -1.18
IRF9-204ENST00000559229 S100A6P06703 90 aa7.69□□□□□ -1.18
IRF9-204ENST00000559229 MACF1Q9UPN3 7388 aaKnown RBP7.69□□□□□ -1.18
IRF9-204ENST00000559229 A0A1B0GX51 115 aa7.68□□□□□ -1.18
IRF9-204ENST00000559229 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
IRF9-204ENST00000559229 LINC00313P59037 77 aa7.67□□□□□ -1.18
IRF9-204ENST00000559229 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
IRF9-204ENST00000559229 FABP2P12104 132 aa7.66□□□□□ -1.18
IRF9-204ENST00000559229 HIGD1BQ9P298 99 aa7.66□□□□□ -1.18
IRF9-204ENST00000559229 C14orf144Q96I85 54 aa7.65□□□□□ -1.18
IRF9-204ENST00000559229 SIGMAR1Q99720 223 aa7.65□□□□□ -1.18
IRF9-204ENST00000559229 MT2AP02795 61 aa7.64□□□□□ -1.19
IRF9-204ENST00000559229 FAM236DA0A1B0GTK5 79 aa7.63□□□□□ -1.19
IRF9-204ENST00000559229 FAM236CP0DP71 79 aa7.63□□□□□ -1.19
IRF9-204ENST00000559229 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
IRF9-204ENST00000559229 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
IRF9-204ENST00000559229 TRBV7-4A0A0J9YYF1 115 aa7.61□□□□□ -1.19
IRF9-204ENST00000559229 RBM12B-AS1Q9P1G2 102 aa7.61□□□□□ -1.19
IRF9-204ENST00000559229 PRO1854Q9UHT4 67 aa7.61□□□□□ -1.19
IRF9-204ENST00000559229 HRES1P13985 223 aa7.6□□□□□ -1.19
IRF9-204ENST00000559229 C2orf91Q6ZV80 131 aa7.6□□□□□ -1.19
IRF9-204ENST00000559229 CEND1Q8N111 149 aa7.6□□□□□ -1.19
IRF9-204ENST00000559229 ANKRD29Q8N6D5 301 aa7.6□□□□□ -1.19
IRF9-204ENST00000559229 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
IRF9-204ENST00000559229 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
IRF9-204ENST00000559229 PAM16Q9Y3D7 125 aa7.59□□□□□ -1.19
IRF9-204ENST00000559229 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
IRF9-204ENST00000559229 A6NJY4 79 aa7.58□□□□□ -1.2
IRF9-204ENST00000559229 MT1FP04733 61 aa7.58□□□□□ -1.2
IRF9-204ENST00000559229 H3BQ85 93 aa7.57□□□□□ -1.2
IRF9-204ENST00000559229 LCE2BO14633 110 aa7.57□□□□□ -1.2
IRF9-204ENST00000559229 TRIAP1O43715 76 aa7.57□□□□□ -1.2
IRF9-204ENST00000559229 LINC00472Q9H8W2 130 aa7.57□□□□□ -1.2
IRF9-204ENST00000559229 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
IRF9-204ENST00000559229 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
IRF9-204ENST00000559229 KRTAP10-10P60014 251 aa7.55□□□□□ -1.2
IRF9-204ENST00000559229 DEFB116Q30KQ4 102 aa7.55□□□□□ -1.2
IRF9-204ENST00000559229 ORMDL1Q9P0S3 153 aa7.55□□□□□ -1.2
IRF9-204ENST00000559229 DNAL4O96015 105 aa7.54□□□□□ -1.2
IRF9-204ENST00000559229 S100A1P23297 94 aa7.54□□□□□ -1.2
IRF9-204ENST00000559229 FXYD2P54710 66 aa7.54□□□□□ -1.2
IRF9-204ENST00000559229 VAMP8Q9BV40 100 aa7.54□□□□□ -1.2
IRF9-204ENST00000559229 IGHV6-1A0A0B4J1U7 121 aa7.53□□□□□ -1.2
IRF9-204ENST00000559229 TMEM256-PLSCR3K7ERE1 68 aa7.53□□□□□ -1.2
IRF9-204ENST00000559229 A0A1B0GV72 72 aa7.52□□□□□ -1.21
IRF9-204ENST00000559229 CCKP06307 115 aa7.52□□□□□ -1.21
IRF9-204ENST00000559229 TRACP01848 142 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms