RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
SMAD3-205ENST00000558428 LOC105371267A0A1B0GV96 52 aa7.04□□□□□ -1.28
SMAD3-205ENST00000558428 SNCGO76070 127 aa7.04□□□□□ -1.28
SMAD3-205ENST00000558428 HRCT1Q6UXD1 115 aa7.04□□□□□ -1.28
SMAD3-205ENST00000558428 F8WEM9 126 aa7.03□□□□□ -1.28
SMAD3-205ENST00000558428 TRIAP1O43715 76 aa7.03□□□□□ -1.28
SMAD3-205ENST00000558428 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
SMAD3-205ENST00000558428 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
SMAD3-205ENST00000558428 PSMB2P49721 201 aa7.02□□□□□ -1.29
SMAD3-205ENST00000558428 PPDPFLQ8WWR9 84 aa7.01□□□□□ -1.29
SMAD3-205ENST00000558428 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
SMAD3-205ENST00000558428 SNHG12Q9BXW3 62 aa7□□□□□ -1.29
SMAD3-205ENST00000558428 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 A0A1B0GX51 115 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 CD164Q04900 197 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 OCIAD2Q56VL3 154 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 CLEC2BQ92478 149 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
SMAD3-205ENST00000558428 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
SMAD3-205ENST00000558428 M0R143 59 aa6.98□□□□□ -1.29
SMAD3-205ENST00000558428 COX6CP09669 75 aa6.98□□□□□ -1.29
SMAD3-205ENST00000558428 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
SMAD3-205ENST00000558428 RNF213Q63HN8 5207 aa6.96□□□□□ -1.29
SMAD3-205ENST00000558428 IGLV8-61A0A075B6I0 122 aa6.96□□□□□ -1.3
SMAD3-205ENST00000558428 Q6JHZ5 121 aa6.96□□□□□ -1.3
SMAD3-205ENST00000558428 DNAL4O96015 105 aa6.95□□□□□ -1.3
SMAD3-205ENST00000558428 GHRHP01286 108 aa6.95□□□□□ -1.3
SMAD3-205ENST00000558428 SCGB1C2P0DMR2 95 aa6.94□□□□□ -1.3
SMAD3-205ENST00000558428 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
SMAD3-205ENST00000558428 CDIP1Q9H305 208 aa6.94□□□□□ -1.3
SMAD3-205ENST00000558428 H3BUT2 72 aa6.93□□□□□ -1.3
SMAD3-205ENST00000558428 FABP2P12104 132 aa6.93□□□□□ -1.3
SMAD3-205ENST00000558428 NDUFV3P56181 108 aaKnown RBP6.92□□□□□ -1.3
SMAD3-205ENST00000558428 ORMDL1Q9P0S3 153 aa6.92□□□□□ -1.3
SMAD3-205ENST00000558428 Q5XG85 94 aa6.91□□□□□ -1.3
SMAD3-205ENST00000558428 BATFQ16520 125 aa6.9□□□□□ -1.3
SMAD3-205ENST00000558428 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
SMAD3-205ENST00000558428 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 H3BMG7 143 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 H3BQ85 93 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 LST1O00453 97 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 TCL1BO95988 128 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 TRACP01848 142 aa6.89□□□□□ -1.31
SMAD3-205ENST00000558428 NAA38Q9BRA0 125 aaKnown RBP6.89□□□□□ -1.31
SMAD3-205ENST00000558428 MUC17Q685J3 4493 aa6.87□□□□□ -1.31
SMAD3-205ENST00000558428 TMEM256-PLSCR3K7ERE1 68 aa6.87□□□□□ -1.31
SMAD3-205ENST00000558428 C1orf195Q5TG92 126 aa6.86□□□□□ -1.31
SMAD3-205ENST00000558428 A0A1B0GV72 72 aa6.85□□□□□ -1.31
SMAD3-205ENST00000558428 Q6Q795 121 aa6.84□□□□□ -1.31
SMAD3-205ENST00000558428 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
SMAD3-205ENST00000558428 UBE2V1Q13404 147 aa6.83□□□□□ -1.32
SMAD3-205ENST00000558428 ATXN8Q156A1 80 aa6.83□□□□□ -1.32
SMAD3-205ENST00000558428 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
SMAD3-205ENST00000558428 ANKRD29Q8N6D5 301 aa6.82□□□□□ -1.32
SMAD3-205ENST00000558428 C9orf92A6NGG3 77 aa6.81□□□□□ -1.32
SMAD3-205ENST00000558428 LYRM7Q5U5X0 104 aa6.81□□□□□ -1.32
SMAD3-205ENST00000558428 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
SMAD3-205ENST00000558428 BAALC-AS2P0C853 105 aa6.8□□□□□ -1.32
SMAD3-205ENST00000558428 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SMAD3-205ENST00000558428 XP32Q5T750 250 aa6.8□□□□□ -1.32
SMAD3-205ENST00000558428 A0A087WSZ3 146 aa6.79□□□□□ -1.32
SMAD3-205ENST00000558428 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
SMAD3-205ENST00000558428 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
SMAD3-205ENST00000558428 TRBV20-1A0A075B6N2 111 aa6.77□□□□□ -1.33
SMAD3-205ENST00000558428 TAX1BP3O14907 124 aa6.77□□□□□ -1.33
SMAD3-205ENST00000558428 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
SMAD3-205ENST00000558428 TRBV7-4A0A0J9YYF1 115 aa6.76□□□□□ -1.33
SMAD3-205ENST00000558428 CCKP06307 115 aa6.76□□□□□ -1.33
SMAD3-205ENST00000558428 SEC61BP60468 96 aaKnown RBP6.75□□□□□ -1.33
SMAD3-205ENST00000558428 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
SMAD3-205ENST00000558428 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
SMAD3-205ENST00000558428 C9JAW5 83 aa6.73□□□□□ -1.33
SMAD3-205ENST00000558428 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
SMAD3-205ENST00000558428 JMJD7-PLA2G4BH0Y9G9 81 aa6.71□□□□□ -1.34
SMAD3-205ENST00000558428 Q96NJ1 140 aa6.71□□□□□ -1.34
SMAD3-205ENST00000558428 COL5A1-AS1Q5SY13 56 aa6.7□□□□□ -1.34
SMAD3-205ENST00000558428 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
SMAD3-205ENST00000558428 KRTAP3-2Q9BYR7 98 aa6.7□□□□□ -1.34
SMAD3-205ENST00000558428 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
SMAD3-205ENST00000558428 PCP4L1A6NKN8 68 aa6.68□□□□□ -1.34
SMAD3-205ENST00000558428 OBSCN-AS1Q96MR7 158 aa6.68□□□□□ -1.34
SMAD3-205ENST00000558428 SIGMAR1Q99720 223 aa6.68□□□□□ -1.34
SMAD3-205ENST00000558428 A0A0U1RQV1 116 aa6.67□□□□□ -1.34
SMAD3-205ENST00000558428 PCOTHQ58A44 107 aa6.67□□□□□ -1.34
SMAD3-205ENST00000558428 MTURNQ8N3F0 131 aa6.67□□□□□ -1.34
SMAD3-205ENST00000558428 SPCS1Q9Y6A9 102 aa6.67□□□□□ -1.34
SMAD3-205ENST00000558428 LOC110117498A0A087WWA1 95 aa6.66□□□□□ -1.34
SMAD3-205ENST00000558428 H3BT86 120 aa6.66□□□□□ -1.34
SMAD3-205ENST00000558428 IGKV4-1P06312 121 aa6.66□□□□□ -1.34
SMAD3-205ENST00000558428 Q6ZQT0 140 aa6.66□□□□□ -1.34
SMAD3-205ENST00000558428 C14orf132Q9NPU4 83 aa6.66□□□□□ -1.34
SMAD3-205ENST00000558428 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
SMAD3-205ENST00000558428 DEFB116Q30KQ4 102 aa6.65□□□□□ -1.34
SMAD3-205ENST00000558428 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
SMAD3-205ENST00000558428 LINC00472Q9H8W2 130 aa6.65□□□□□ -1.34
SMAD3-205ENST00000558428 PDE6GP18545 87 aa6.64□□□□□ -1.35
SMAD3-205ENST00000558428 C21orf62-AS1Q17RA5 79 aa6.64□□□□□ -1.35
SMAD3-205ENST00000558428 DSCR10P59022 87 aa6.61□□□□□ -1.35
SMAD3-205ENST00000558428 A0A1B0GW54 56 aa6.6□□□□□ -1.35
SMAD3-205ENST00000558428 Q75L30 129 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms