RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MUC2Q02817 5179 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 CFC1BP0CG36 223 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 CFC1P0CG37 223 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 VAMP3Q15836 100 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 XP32Q5T750 250 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 Q6ZQY7 126 aa5.8□□□□□ -1.48
SNX6-208ENST00000556712 PRO1933Q9H354 126 aa5.79□□□□□ -1.48
SNX6-208ENST00000556712 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
SNX6-208ENST00000556712 RAB37Q96AX2 223 aa5.78□□□□□ -1.48
SNX6-208ENST00000556712 LIMD2Q9BT23 127 aa5.78□□□□□ -1.48
SNX6-208ENST00000556712 A0A0B4J2C4 111 aa5.77□□□□□ -1.49
SNX6-208ENST00000556712 FXYD2P54710 66 aa5.77□□□□□ -1.49
SNX6-208ENST00000556712 BVES-AS1Q5T3Y7 98 aa5.77□□□□□ -1.49
SNX6-208ENST00000556712 CEND1Q8N111 149 aa5.77□□□□□ -1.49
SNX6-208ENST00000556712 CD164Q04900 197 aa5.75□□□□□ -1.49
SNX6-208ENST00000556712 F8WEM9 126 aa5.74□□□□□ -1.49
SNX6-208ENST00000556712 FAM218AQ96MZ4 157 aa5.74□□□□□ -1.49
SNX6-208ENST00000556712 TMEM238LA0A1B0GVL6 79 aa5.73□□□□□ -1.49
SNX6-208ENST00000556712 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
SNX6-208ENST00000556712 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
SNX6-208ENST00000556712 K7ERJ3 54 aa5.72□□□□□ -1.49
SNX6-208ENST00000556712 H3BUT2 72 aa5.71□□□□□ -1.5
SNX6-208ENST00000556712 HSD52Q0P140 79 aa5.71□□□□□ -1.5
SNX6-208ENST00000556712 IGFL1Q6UW32 110 aa5.71□□□□□ -1.5
SNX6-208ENST00000556712 PRO1854Q9UHT4 67 aa5.71□□□□□ -1.5
SNX6-208ENST00000556712 TRIAP1O43715 76 aa5.7□□□□□ -1.5
SNX6-208ENST00000556712 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
SNX6-208ENST00000556712 C1orf195Q5TG92 126 aa5.7□□□□□ -1.5
SNX6-208ENST00000556712 CLEC2BQ92478 149 aa5.7□□□□□ -1.5
SNX6-208ENST00000556712 IGLV8-61A0A075B6I0 122 aa5.69□□□□□ -1.5
SNX6-208ENST00000556712 OCIAD2Q56VL3 154 aa5.69□□□□□ -1.5
SNX6-208ENST00000556712 Q5XG85 94 aa5.69□□□□□ -1.5
SNX6-208ENST00000556712 UQCR10Q9UDW1 63 aa5.69□□□□□ -1.5
SNX6-208ENST00000556712 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 H0YGX0 51 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 Q6JHZ5 121 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 PPDPFLQ8WWR9 84 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 SNHG12Q9BXW3 62 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
SNX6-208ENST00000556712 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
SNX6-208ENST00000556712 TRBV7-7A0A0K0K1E9 115 aa5.66□□□□□ -1.5
SNX6-208ENST00000556712 TCL1BO95988 128 aa5.65□□□□□ -1.5
SNX6-208ENST00000556712 NDUFV3P56181 108 aaKnown RBP5.65□□□□□ -1.5
SNX6-208ENST00000556712 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
SNX6-208ENST00000556712 A0A1B0GX51 115 aa5.64□□□□□ -1.51
SNX6-208ENST00000556712 SNCGO76070 127 aa5.64□□□□□ -1.51
SNX6-208ENST00000556712 FABP2P12104 132 aa5.64□□□□□ -1.51
SNX6-208ENST00000556712 PSMB2P49721 201 aa5.64□□□□□ -1.51
SNX6-208ENST00000556712 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
SNX6-208ENST00000556712 A0A1B0GV72 72 aa5.62□□□□□ -1.51
SNX6-208ENST00000556712 H3BMG7 143 aa5.61□□□□□ -1.51
SNX6-208ENST00000556712 PCOTHQ58A44 107 aa5.61□□□□□ -1.51
SNX6-208ENST00000556712 DNAL4O96015 105 aa5.6□□□□□ -1.51
SNX6-208ENST00000556712 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
SNX6-208ENST00000556712 Q6Q795 121 aa5.59□□□□□ -1.51
SNX6-208ENST00000556712 ORMDL1Q9P0S3 153 aa5.59□□□□□ -1.51
SNX6-208ENST00000556712 A0A087WSZ3 146 aa5.58□□□□□ -1.52
SNX6-208ENST00000556712 COX6CP09669 75 aa5.58□□□□□ -1.52
SNX6-208ENST00000556712 SMIM6P0DI80 62 aa5.58□□□□□ -1.52
SNX6-208ENST00000556712 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
SNX6-208ENST00000556712 A0A1W2PNM2 257 aa5.57□□□□□ -1.52
SNX6-208ENST00000556712 LST1O00453 97 aa5.57□□□□□ -1.52
SNX6-208ENST00000556712 GHRHP01286 108 aa5.57□□□□□ -1.52
SNX6-208ENST00000556712 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
SNX6-208ENST00000556712 TEN1Q86WV5 123 aa5.57□□□□□ -1.52
SNX6-208ENST00000556712 SCGB1C2P0DMR2 95 aa5.56□□□□□ -1.52
SNX6-208ENST00000556712 NAA38Q9BRA0 125 aaKnown RBP5.56□□□□□ -1.52
SNX6-208ENST00000556712 SS18L2Q9UHA2 77 aa5.56□□□□□ -1.52
SNX6-208ENST00000556712 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
SNX6-208ENST00000556712 OBSCN-AS1Q96MR7 158 aa5.55□□□□□ -1.52
SNX6-208ENST00000556712 M0R143 59 aa5.54□□□□□ -1.52
SNX6-208ENST00000556712 Q96NJ1 140 aa5.54□□□□□ -1.52
SNX6-208ENST00000556712 TMEM256-PLSCR3K7ERE1 68 aa5.53□□□□□ -1.52
SNX6-208ENST00000556712 TRACP01848 142 aa5.53□□□□□ -1.52
SNX6-208ENST00000556712 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
SNX6-208ENST00000556712 LOC105371267A0A1B0GV96 52 aa5.51□□□□□ -1.53
SNX6-208ENST00000556712 H3BQ85 93 aa5.51□□□□□ -1.53
SNX6-208ENST00000556712 UBE2V1Q13404 147 aa5.51□□□□□ -1.53
SNX6-208ENST00000556712 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
SNX6-208ENST00000556712 SIGMAR1Q99720 223 aa5.51□□□□□ -1.53
SNX6-208ENST00000556712 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
SNX6-208ENST00000556712 TSTD3H0UI37 97 aa5.49□□□□□ -1.53
SNX6-208ENST00000556712 CCKP06307 115 aa5.49□□□□□ -1.53
SNX6-208ENST00000556712 BATFQ16520 125 aa5.49□□□□□ -1.53
SNX6-208ENST00000556712 VPS25Q9BRG1 176 aa5.49□□□□□ -1.53
SNX6-208ENST00000556712 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
SNX6-208ENST00000556712 DSCR10P59022 87 aa5.48□□□□□ -1.53
SNX6-208ENST00000556712 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
SNX6-208ENST00000556712 Q75L30 129 aa5.47□□□□□ -1.53
SNX6-208ENST00000556712 IGKV4-1P06312 121 aa5.46□□□□□ -1.54
SNX6-208ENST00000556712 RBM3P98179 157 aaKnown RBP5.46□□□□□ -1.54
SNX6-208ENST00000556712 ATXN8Q156A1 80 aa5.46□□□□□ -1.54
SNX6-208ENST00000556712 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
SNX6-208ENST00000556712 DSCR8Q96T75 97 aa5.44□□□□□ -1.54
SNX6-208ENST00000556712 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
SNX6-208ENST00000556712 LINC00472Q9H8W2 130 aa5.44□□□□□ -1.54
SNX6-208ENST00000556712 A8MUU9 505 aa5.43□□□□□ -1.54
SNX6-208ENST00000556712 MT1HP80294 61 aa5.43□□□□□ -1.54
SNX6-208ENST00000556712 ATP11AUNQ6ZP68 121 aa5.43□□□□□ -1.54
SNX6-208ENST00000556712 C9JAW5 83 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 297.7 ms