RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 FAM229BQ4G0N7 80 aa10.68□□□□□ -0.7
PTPN21-208ENST00000556564 COA5Q86WW8 74 aa10.67□□□□□ -0.7
PTPN21-208ENST00000556564 KRTAP26-1Q6PEX3 210 aa10.66□□□□□ -0.7
PTPN21-208ENST00000556564 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
PTPN21-208ENST00000556564 Q8N1X5 172 aa10.66□□□□□ -0.7
PTPN21-208ENST00000556564 DMXL2Q8TDJ6 3036 aa10.61□□□□□ -0.71
PTPN21-208ENST00000556564 C1orf195Q5TG92 126 aa10.61□□□□□ -0.71
PTPN21-208ENST00000556564 USP34Q70CQ2 3546 aa10.61□□□□□ -0.71
PTPN21-208ENST00000556564 REV3LO60673 3130 aa10.61□□□□□ -0.71
PTPN21-208ENST00000556564 BOD1L1Q8NFC6 3051 aa10.6□□□□□ -0.71
PTPN21-208ENST00000556564 FRYLO94915 3013 aa10.6□□□□□ -0.71
PTPN21-208ENST00000556564 CHD6Q8TD26 2715 aa10.59□□□□□ -0.71
PTPN21-208ENST00000556564 COL6A5A8TX70 2615 aa10.59□□□□□ -0.71
PTPN21-208ENST00000556564 SPRR1AP35321 89 aa10.57□□□□□ -0.72
PTPN21-208ENST00000556564 Q6ZR54 194 aa10.56□□□□□ -0.72
PTPN21-208ENST00000556564 LINC01600Q96MT4 127 aa10.56□□□□□ -0.72
PTPN21-208ENST00000556564 ATMQ13315 3056 aa10.56□□□□□ -0.72
PTPN21-208ENST00000556564 M0R2T5 61 aa10.55□□□□□ -0.72
PTPN21-208ENST00000556564 PANO1I0J062 215 aa10.54□□□□□ -0.72
PTPN21-208ENST00000556564 MAP1AP78559 2803 aaPredicted RBP10.52□□□□□ -0.73
PTPN21-208ENST00000556564 SETXQ7Z333 2677 aaKnown RBP10.51□□□□□ -0.73
PTPN21-208ENST00000556564 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
PTPN21-208ENST00000556564 DMXL1Q9Y485 3027 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 FREM2Q5SZK8 3169 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 LRBAP50851 2863 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 SPEGQ15772 3267 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 C4orf26Q17RF5 130 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
PTPN21-208ENST00000556564 COL12A1Q99715 3063 aa10.48□□□□□ -0.73
PTPN21-208ENST00000556564 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
PTPN21-208ENST00000556564 ITPR2Q14571 2701 aa10.47□□□□□ -0.73
PTPN21-208ENST00000556564 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
PTPN21-208ENST00000556564 A8MUN3 132 aa10.41□□□□□ -0.74
PTPN21-208ENST00000556564 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
PTPN21-208ENST00000556564 UTP20O75691 2785 aaKnown RBP10.4□□□□□ -0.74
PTPN21-208ENST00000556564 SPRR1BP22528 89 aa10.4□□□□□ -0.75
PTPN21-208ENST00000556564 ZCCHC13Q8WW36 166 aaKnown RBP10.39□□□□□ -0.75
PTPN21-208ENST00000556564 A0A0D9SG42 100 aa10.39□□□□□ -0.75
PTPN21-208ENST00000556564 UQCR11O14957 56 aa10.38□□□□□ -0.75
PTPN21-208ENST00000556564 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
PTPN21-208ENST00000556564 MYO15AQ9UKN7 3530 aa10.37□□□□□ -0.75
PTPN21-208ENST00000556564 ADGRG4Q8IZF6 3080 aa10.37□□□□□ -0.75
PTPN21-208ENST00000556564 MMP24-AS1A0A0U1RRL7 71 aa10.36□□□□□ -0.75
PTPN21-208ENST00000556564 FLNCQ14315 2725 aa10.35□□□□□ -0.75
PTPN21-208ENST00000556564 H7BZZ5 65 aa10.34□□□□□ -0.75
PTPN21-208ENST00000556564 NOTCH1P46531 2555 aa10.33□□□□□ -0.76
PTPN21-208ENST00000556564 Q6ZRN7 208 aaPredicted RBP10.33□□□□□ -0.76
PTPN21-208ENST00000556564 KALRNO60229 2985 aa10.32□□□□□ -0.76
PTPN21-208ENST00000556564 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
PTPN21-208ENST00000556564 SEC61BP60468 96 aaKnown RBP10.32□□□□□ -0.76
PTPN21-208ENST00000556564 SPINT4Q6UDR6 99 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 ITPR1Q14643 2758 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 CFAP47Q6ZTR5 3102 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 HRES1P13985 223 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 OCR1Q9BZK8 76 aa10.31□□□□□ -0.76
PTPN21-208ENST00000556564 UBR5O95071 2799 aaPredicted RBP10.3□□□□□ -0.76
PTPN21-208ENST00000556564 NBEAL2Q6ZNJ1 2754 aa10.29□□□□□ -0.76
PTPN21-208ENST00000556564 LINC00472Q9H8W2 130 aa10.28□□□□□ -0.76
PTPN21-208ENST00000556564 TACC2O95359 2948 aa10.28□□□□□ -0.76
PTPN21-208ENST00000556564 SPANXA2-OT1Q8N9U9 137 aa10.28□□□□□ -0.76
PTPN21-208ENST00000556564 A0A087X002 238 aa10.27□□□□□ -0.76
PTPN21-208ENST00000556564 S4R3F8 94 aa10.25□□□□□ -0.77
PTPN21-208ENST00000556564 NBEAQ8NFP9 2946 aa10.25□□□□□ -0.77
PTPN21-208ENST00000556564 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
PTPN21-208ENST00000556564 Q8N9P0 234 aaPredicted RBP10.25□□□□□ -0.77
PTPN21-208ENST00000556564 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
PTPN21-208ENST00000556564 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
PTPN21-208ENST00000556564 SPINK7P58062 85 aa10.22□□□□□ -0.77
PTPN21-208ENST00000556564 KMT2BQ9UMN6 2715 aaPredicted RBP10.22□□□□□ -0.77
PTPN21-208ENST00000556564 PRO0628Q9UI54 55 aa10.22□□□□□ -0.77
PTPN21-208ENST00000556564 KRTAP4-16G5E9R7 235 aaPredicted RBP10.21□□□□□ -0.77
PTPN21-208ENST00000556564 OXTP01178 125 aa10.21□□□□□ -0.77
PTPN21-208ENST00000556564 Q5W150 140 aa10.21□□□□□ -0.77
PTPN21-208ENST00000556564 APCP25054 2843 aa10.2□□□□□ -0.78
PTPN21-208ENST00000556564 CRYBG3Q68DQ2 2970 aa10.2□□□□□ -0.78
PTPN21-208ENST00000556564 LOC400499M0QZD8 3231 aa10.17□□□□□ -0.78
PTPN21-208ENST00000556564 CSAG1Q6PB30 78 aa10.15□□□□□ -0.78
PTPN21-208ENST00000556564 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
PTPN21-208ENST00000556564 CRIPTQ9P021 101 aa10.13□□□□□ -0.79
PTPN21-208ENST00000556564 NBEAL1Q6ZS30 2694 aa10.1□□□□□ -0.79
PTPN21-208ENST00000556564 KRTAP7-1Q8IUC3 87 aa10.09□□□□□ -0.79
PTPN21-208ENST00000556564 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
PTPN21-208ENST00000556564 CAMK2N1Q7Z7J9 78 aa10.07□□□□□ -0.8
PTPN21-208ENST00000556564 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
PTPN21-208ENST00000556564 ASPMQ8IZT6 3477 aa10.03□□□□□ -0.8
PTPN21-208ENST00000556564 A0A1B0GU33 70 aa10.02□□□□□ -0.8
PTPN21-208ENST00000556564 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.81
PTPN21-208ENST00000556564 HRNRQ86YZ3 2850 aaPredicted RBP10□□□□□ -0.81
PTPN21-208ENST00000556564 KRTAP13-2Q52LG2 175 aa9.96□□□□□ -0.81
PTPN21-208ENST00000556564 TENM4Q6N022 2769 aa9.96□□□□□ -0.82
PTPN21-208ENST00000556564 NOTCH2NLQ7Z3S9 236 aa9.93□□□□□ -0.82
PTPN21-208ENST00000556564 RELNP78509 3460 aa9.92□□□□□ -0.82
PTPN21-208ENST00000556564 DMDP11532 3685 aa9.92□□□□□ -0.82
PTPN21-208ENST00000556564 R4GN34 69 aa9.92□□□□□ -0.82
PTPN21-208ENST00000556564 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
PTPN21-208ENST00000556564 KRTAP13-1Q8IUC0 172 aa9.89□□□□□ -0.83
PTPN21-208ENST00000556564 RPS29P62273 56 aaKnown RBP9.88□□□□□ -0.83
PTPN21-208ENST00000556564 CELSR2Q9HCU4 2923 aa9.86□□□□□ -0.83
PTPN21-208ENST00000556564 LAMA5O15230 3695 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms