RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CFC1BP0CG36 223 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 CFC1P0CG37 223 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 CD164Q04900 197 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 VAMP3Q15836 100 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 XP32Q5T750 250 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 Q6ZQY7 126 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 LIMD2Q9BT23 127 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 VAMP8Q9BV40 100 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 HIGD1BQ9P298 99 aa4.46□□□□□ -1.7
VTI1B-206ENST00000556461 C9orf92A6NGG3 77 aa4.44□□□□□ -1.7
VTI1B-206ENST00000556461 PYY3Q5JQD4 70 aa4.44□□□□□ -1.7
VTI1B-206ENST00000556461 C1orf195Q5TG92 126 aa4.44□□□□□ -1.7
VTI1B-206ENST00000556461 A0A0U1RQV1 116 aa4.43□□□□□ -1.7
VTI1B-206ENST00000556461 Q5XG85 94 aa4.43□□□□□ -1.7
VTI1B-206ENST00000556461 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
VTI1B-206ENST00000556461 A0A0B4J2C4 111 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 FXYD2P54710 66 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
VTI1B-206ENST00000556461 BVES-AS1Q5T3Y7 98 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.42□□□□□ -1.7
VTI1B-206ENST00000556461 CEND1Q8N111 149 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 RAB37Q96AX2 223 aa4.42□□□□□ -1.7
VTI1B-206ENST00000556461 TMA7Q9Y2S6 64 aaKnown RBP4.42□□□□□ -1.7
VTI1B-206ENST00000556461 IGLV8-61A0A075B6I0 122 aa4.41□□□□□ -1.7
VTI1B-206ENST00000556461 F8WEM9 126 aa4.41□□□□□ -1.7
VTI1B-206ENST00000556461 OCIAD2Q56VL3 154 aa4.41□□□□□ -1.7
VTI1B-206ENST00000556461 H3BUT2 72 aa4.4□□□□□ -1.71
VTI1B-206ENST00000556461 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
VTI1B-206ENST00000556461 PRO1854Q9UHT4 67 aa4.39□□□□□ -1.71
VTI1B-206ENST00000556461 TRBV7-7A0A0K0K1E9 115 aa4.38□□□□□ -1.71
VTI1B-206ENST00000556461 K7ERJ3 54 aa4.38□□□□□ -1.71
VTI1B-206ENST00000556461 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
VTI1B-206ENST00000556461 Q6JHZ5 121 aa4.38□□□□□ -1.71
VTI1B-206ENST00000556461 SNHG12Q9BXW3 62 aa4.38□□□□□ -1.71
VTI1B-206ENST00000556461 H0YGX0 51 aa4.37□□□□□ -1.71
VTI1B-206ENST00000556461 TRIAP1O43715 76 aa4.37□□□□□ -1.71
VTI1B-206ENST00000556461 TCL1BO95988 128 aa4.37□□□□□ -1.71
VTI1B-206ENST00000556461 PPDPFLQ8WWR9 84 aa4.37□□□□□ -1.71
VTI1B-206ENST00000556461 TMEM238LA0A1B0GVL6 79 aa4.36□□□□□ -1.71
VTI1B-206ENST00000556461 HSD52Q0P140 79 aa4.36□□□□□ -1.71
VTI1B-206ENST00000556461 NDUFV3P56181 108 aaKnown RBP4.35□□□□□ -1.71
VTI1B-206ENST00000556461 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
VTI1B-206ENST00000556461 A0A1B0GX51 115 aa4.33□□□□□ -1.72
VTI1B-206ENST00000556461 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
VTI1B-206ENST00000556461 UQCR10Q9UDW1 63 aa4.33□□□□□ -1.72
VTI1B-206ENST00000556461 H3BMG7 143 aa4.32□□□□□ -1.72
VTI1B-206ENST00000556461 SNCGO76070 127 aa4.32□□□□□ -1.72
VTI1B-206ENST00000556461 FABP2P12104 132 aa4.32□□□□□ -1.72
VTI1B-206ENST00000556461 A0A1B0GV72 72 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 A0A1W2PNM2 257 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 LST1O00453 97 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 GHRHP01286 108 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 PSMB2P49721 201 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 Q6Q795 121 aa4.31□□□□□ -1.72
VTI1B-206ENST00000556461 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
VTI1B-206ENST00000556461 A0A087WSZ3 146 aa4.3□□□□□ -1.72
VTI1B-206ENST00000556461 TEN1Q86WV5 123 aa4.3□□□□□ -1.72
VTI1B-206ENST00000556461 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
VTI1B-206ENST00000556461 Q96NJ1 140 aa4.3□□□□□ -1.72
VTI1B-206ENST00000556461 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
VTI1B-206ENST00000556461 ORMDL1Q9P0S3 153 aa4.29□□□□□ -1.72
VTI1B-206ENST00000556461 DNAL4O96015 105 aa4.28□□□□□ -1.72
VTI1B-206ENST00000556461 COX6CP09669 75 aa4.27□□□□□ -1.73
VTI1B-206ENST00000556461 MT1HP80294 61 aa4.27□□□□□ -1.73
VTI1B-206ENST00000556461 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
VTI1B-206ENST00000556461 Q75L30 129 aa4.26□□□□□ -1.73
VTI1B-206ENST00000556461 ANKRD29Q8N6D5 301 aa4.26□□□□□ -1.73
VTI1B-206ENST00000556461 TMEM256-PLSCR3K7ERE1 68 aa4.25□□□□□ -1.73
VTI1B-206ENST00000556461 TRACP01848 142 aa4.25□□□□□ -1.73
VTI1B-206ENST00000556461 SCGB1C2P0DMR2 95 aa4.25□□□□□ -1.73
VTI1B-206ENST00000556461 NAA38Q9BRA0 125 aaKnown RBP4.25□□□□□ -1.73
VTI1B-206ENST00000556461 DSCR10P59022 87 aa4.24□□□□□ -1.73
VTI1B-206ENST00000556461 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
VTI1B-206ENST00000556461 TRBV7-4A0A0J9YYF1 115 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 H3BQ85 93 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 CCKP06307 115 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 DEFB116Q30KQ4 102 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 SIGMAR1Q99720 223 aa4.23□□□□□ -1.73
VTI1B-206ENST00000556461 A8MUU9 505 aa4.22□□□□□ -1.73
VTI1B-206ENST00000556461 SMIM6P0DI80 62 aa4.22□□□□□ -1.73
VTI1B-206ENST00000556461 ATP11AUNQ6ZP68 121 aa4.22□□□□□ -1.73
VTI1B-206ENST00000556461 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
VTI1B-206ENST00000556461 LINC00472Q9H8W2 130 aa4.22□□□□□ -1.73
VTI1B-206ENST00000556461 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
VTI1B-206ENST00000556461 BAALC-AS2P0C853 105 aa4.21□□□□□ -1.74
VTI1B-206ENST00000556461 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
VTI1B-206ENST00000556461 M0R143 59 aa4.2□□□□□ -1.74
VTI1B-206ENST00000556461 RBM3P98179 157 aaKnown RBP4.2□□□□□ -1.74
VTI1B-206ENST00000556461 VPS25Q9BRG1 176 aa4.2□□□□□ -1.74
VTI1B-206ENST00000556461 LOC105371267A0A1B0GV96 52 aa4.19□□□□□ -1.74
VTI1B-206ENST00000556461 LINC00313P59037 77 aa4.18□□□□□ -1.74
VTI1B-206ENST00000556461 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
VTI1B-206ENST00000556461 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
VTI1B-206ENST00000556461 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
VTI1B-206ENST00000556461 IGHV6-1A0A0B4J1U7 121 aa4.17□□□□□ -1.74
VTI1B-206ENST00000556461 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
VTI1B-206ENST00000556461 C9JAW5 83 aa4.16□□□□□ -1.74
VTI1B-206ENST00000556461 BATFQ16520 125 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms