RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.6
LINC00641-201ENST00000555379 SRCAPQ6ZRS2 3230 aa5.08□□□□□ -1.6
LINC00641-201ENST00000555379 HELZ2Q9BYK8 2649 aaKnown RBP5.08□□□□□ -1.6
LINC00641-201ENST00000555379 SETD2Q9BYW2 2564 aaPredicted RBP5.07□□□□□ -1.6
LINC00641-201ENST00000555379 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
LINC00641-201ENST00000555379 HECTD1Q9ULT8 2610 aa5.04□□□□□ -1.6
LINC00641-201ENST00000555379 KRTAP1-5Q9BYS1 174 aa5.03□□□□□ -1.6
LINC00641-201ENST00000555379 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
LINC00641-201ENST00000555379 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
LINC00641-201ENST00000555379 Q8N1X5 172 aa5.02□□□□□ -1.61
LINC00641-201ENST00000555379 FLNAP21333 2647 aaKnown RBP5.01□□□□□ -1.61
LINC00641-201ENST00000555379 FLNBO75369 2602 aaKnown RBP5.01□□□□□ -1.61
LINC00641-201ENST00000555379 Q5W150 140 aa5□□□□□ -1.61
LINC00641-201ENST00000555379 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
LINC00641-201ENST00000555379 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
LINC00641-201ENST00000555379 KRTAP10-2P60368 255 aa4.99□□□□□ -1.61
LINC00641-201ENST00000555379 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
LINC00641-201ENST00000555379 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
LINC00641-201ENST00000555379 A0A0G2JQZ4 141 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 BPTFQ12830 3046 aa4.97□□□□□ -1.61
LINC00641-201ENST00000555379 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.61
LINC00641-201ENST00000555379 R4GN34 69 aa4.96□□□□□ -1.62
LINC00641-201ENST00000555379 KMT2BQ9UMN6 2715 aaPredicted RBP4.94□□□□□ -1.62
LINC00641-201ENST00000555379 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
LINC00641-201ENST00000555379 A8MUU9 505 aa4.9□□□□□ -1.62
LINC00641-201ENST00000555379 MGAM2Q2M2H8 2515 aa4.9□□□□□ -1.63
LINC00641-201ENST00000555379 Q8NDZ9 215 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 USP24Q9UPU5 2620 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 WDR87Q6ZQQ6 2873 aa4.89□□□□□ -1.63
LINC00641-201ENST00000555379 A8MU10 97 aa4.87□□□□□ -1.63
LINC00641-201ENST00000555379 PANO1I0J062 215 aa4.87□□□□□ -1.63
LINC00641-201ENST00000555379 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
LINC00641-201ENST00000555379 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
LINC00641-201ENST00000555379 M0QZ58 72 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 MAST4O15021 2626 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 ATRQ13535 2644 aa4.85□□□□□ -1.63
LINC00641-201ENST00000555379 PCNTO95613 3336 aa4.82□□□□□ -1.64
LINC00641-201ENST00000555379 CFAP46Q8IYW2 2715 aa4.82□□□□□ -1.64
LINC00641-201ENST00000555379 KRTAP11-1Q8IUC1 163 aa4.79□□□□□ -1.64
LINC00641-201ENST00000555379 UNC79Q9P2D8 2635 aa4.78□□□□□ -1.64
LINC00641-201ENST00000555379 ZNF292O60281 2723 aa4.77□□□□□ -1.65
LINC00641-201ENST00000555379 BAHCC1Q9P281 2608 aa4.76□□□□□ -1.65
LINC00641-201ENST00000555379 CENPFP49454 3210 aa4.75□□□□□ -1.65
LINC00641-201ENST00000555379 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
LINC00641-201ENST00000555379 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
LINC00641-201ENST00000555379 STAB1Q9NY15 2570 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 DNAH12Q6ZR08 3092 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 A0A0C4DFX4 3053 aa4.72□□□□□ -1.65
LINC00641-201ENST00000555379 BRCA2P51587 3418 aa4.71□□□□□ -1.66
LINC00641-201ENST00000555379 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
LINC00641-201ENST00000555379 CEP350Q5VT06 3117 aa4.7□□□□□ -1.66
LINC00641-201ENST00000555379 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
LINC00641-201ENST00000555379 IGSF10Q6WRI0 2623 aa4.64□□□□□ -1.67
LINC00641-201ENST00000555379 NSD1Q96L73 2696 aaPredicted RBP4.63□□□□□ -1.67
LINC00641-201ENST00000555379 TEP1Q99973 2627 aaKnown RBP4.63□□□□□ -1.67
LINC00641-201ENST00000555379 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
LINC00641-201ENST00000555379 P0C880 135 aa4.62□□□□□ -1.67
LINC00641-201ENST00000555379 HTTP42858 3142 aa4.6□□□□□ -1.67
LINC00641-201ENST00000555379 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
LINC00641-201ENST00000555379 KRTAP1-4P0C5Y4 121 aa4.59□□□□□ -1.68
LINC00641-201ENST00000555379 TNP1P09430 55 aa4.59□□□□□ -1.68
LINC00641-201ENST00000555379 MKI67P46013 3256 aaKnown RBP4.57□□□□□ -1.68
LINC00641-201ENST00000555379 XP32Q5T750 250 aa4.56□□□□□ -1.68
LINC00641-201ENST00000555379 TRANK1O15050 2925 aa4.56□□□□□ -1.68
LINC00641-201ENST00000555379 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 CHD9Q3L8U1 2897 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
LINC00641-201ENST00000555379 LAMA2P24043 3122 aaKnown RBP4.54□□□□□ -1.68
LINC00641-201ENST00000555379 LAMA3Q16787 3333 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 A0A1B0GVY2 172 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 TEX15Q9BXT5 2789 aa4.53□□□□□ -1.68
LINC00641-201ENST00000555379 MAP1AP78559 2803 aaPredicted RBP4.5□□□□□ -1.69
LINC00641-201ENST00000555379 NBEAL1Q6ZS30 2694 aa4.5□□□□□ -1.69
LINC00641-201ENST00000555379 SETXQ7Z333 2677 aaKnown RBP4.49□□□□□ -1.69
LINC00641-201ENST00000555379 KRTAP13-3Q3SY46 172 aa4.49□□□□□ -1.69
LINC00641-201ENST00000555379 GCN1Q92616 2671 aaKnown RBP4.48□□□□□ -1.69
LINC00641-201ENST00000555379 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
LINC00641-201ENST00000555379 H0YAA0 97 aa4.47□□□□□ -1.69
LINC00641-201ENST00000555379 CDH23Q9H251 3354 aa4.46□□□□□ -1.7
LINC00641-201ENST00000555379 CHD7Q9P2D1 2997 aa4.44□□□□□ -1.7
LINC00641-201ENST00000555379 CENPEQ02224 2701 aa4.41□□□□□ -1.7
LINC00641-201ENST00000555379 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
LINC00641-201ENST00000555379 SPTBN5Q9NRC6 3674 aaKnown RBP4.41□□□□□ -1.7
LINC00641-201ENST00000555379 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
LINC00641-201ENST00000555379 PRRC2CQ9Y520 2896 aaKnown RBP4.4□□□□□ -1.7
LINC00641-201ENST00000555379 XIRP2A4UGR9 3374 aa4.4□□□□□ -1.71
LINC00641-201ENST00000555379 INE1O15225 51 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 CHD6Q8TD26 2715 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 C5orf42Q9H799 3197 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 EYSQ5T1H1 3165 aa4.39□□□□□ -1.71
LINC00641-201ENST00000555379 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
LINC00641-201ENST00000555379 AKAP13Q12802 2813 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 SZT2Q5T011 3432 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 UNC80Q8N2C7 3258 aa4.38□□□□□ -1.71
LINC00641-201ENST00000555379 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
LINC00641-201ENST00000555379 HIVEP1P15822 2718 aa4.36□□□□□ -1.71
LINC00641-201ENST00000555379 REV3LO60673 3130 aa4.36□□□□□ -1.71
LINC00641-201ENST00000555379 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
LINC00641-201ENST00000555379 UBR5O95071 2799 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms