RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 KMT2AQ03164 3969 aa2.79□□□□□ -1.96
ATXN3-225ENST00000554214 IGLV4-69A0A075B6H9 119 aa2.78□□□□□ -1.96
ATXN3-225ENST00000554214 IGHV1OR15-1A0A075B7D0 117 aa2.78□□□□□ -1.96
ATXN3-225ENST00000554214 CCL3L1P16619 93 aa2.78□□□□□ -1.96
ATXN3-225ENST00000554214 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
ATXN3-225ENST00000554214 TRBV6-5A0A0K0K1A5 114 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 LHBP01229 141 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 PRB4P10163 310 aaPredicted RBP2.77□□□□□ -1.97
ATXN3-225ENST00000554214 TSPEAR-AS2P59090 65 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 REG3AQ06141 175 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 Q8N814 137 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 GAFA1Q96PS6 74 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 SND1-IT1Q9HBX3 110 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 C22orf24Q9Y442 160 aa2.77□□□□□ -1.97
ATXN3-225ENST00000554214 LOC110117498A0A087WWA1 95 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 TRAV10A0A0B4J240 114 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 C17orf98A8MV24 154 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 CRPP02741 224 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 ERHP84090 104 aaKnown RBP2.76□□□□□ -1.97
ATXN3-225ENST00000554214 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 FGF23Q9GZV9 251 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-225ENST00000554214 NDUFA4L2Q9NRX3 87 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 KAAG1Q9UBP8 84 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 HERC1Q15751 4861 aa2.76□□□□□ -1.97
ATXN3-225ENST00000554214 IGKV2-28A0A075B6P5 120 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 IGKV2D-28P01615 120 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 IGLV1-51P01701 117 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 CTSGP08311 255 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 PRCDQ00LT1 54 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 DEFB114Q30KQ6 69 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 S4R3C0 116 aa2.75□□□□□ -1.97
ATXN3-225ENST00000554214 ODF3BA8MYP8 253 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 K7ERS5 55 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 IGHV3-30-3P0DP02 117 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 ROMO1P60602 79 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 HAMPP81172 84 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 SPINK9Q5DT21 86 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 MIR7-3HGQ8N6C7 128 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 Q8N9W7 124 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 LINC00208Q96KT6 92 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 LENEPQ9Y5L5 61 aa2.74□□□□□ -1.97
ATXN3-225ENST00000554214 PKD1P98161 4303 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 IGHV3-74A0A0B4J1X5 117 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 H3BPC8 53 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 NDUFA1O15239 70 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 INSP01308 110 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 CRIP1P50238 77 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 C1orf134Q5TEV5 83 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 ZFAND2AQ8N6M9 145 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 LINC00308Q8TCZ7 52 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 ZNF625Q96I27 306 aaPredicted RBP2.73□□□□□ -1.97
ATXN3-225ENST00000554214 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
ATXN3-225ENST00000554214 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 IGKV1OR2-108A0A075B7D4 117 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 TRBV10-1A0A0K0K1A3 114 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 CHTF8P0CG12 524 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
ATXN3-225ENST00000554214 MUC2Q02817 5179 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV3-21A0A0B4J1V1 117 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV3-73A0A0B4J1V6 119 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 NCR3O14931 201 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV1-8P0DP01 117 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 ZCCHC13Q8WW36 166 aaKnown RBP2.71□□□□□ -1.98
ATXN3-225ENST00000554214 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 CAMK2N2Q96S95 79 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 HIGD2AQ9BW72 106 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 WFDC10AQ9H1F0 79 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 KLK9Q9UKQ9 250 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 DNAH2Q9P225 4427 aa2.71□□□□□ -1.98
ATXN3-225ENST00000554214 DSCAML1Q8TD84 2053 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 MUC4Q99102 2169 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 SPAG11BQ08648 103 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 RNASE13Q5GAN3 156 aaKnown RBP2.7□□□□□ -1.98
ATXN3-225ENST00000554214 SPAG11AQ6PDA7 123 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 Q6ZQT0 140 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 C5orf56Q8N8D9 126 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
ATXN3-225ENST00000554214 SORL1Q92673 2214 aa2.69□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV3-49A0A0A0MS15 119 aa2.69□□□□□ -1.98
ATXN3-225ENST00000554214 LECT2O14960 151 aa2.69□□□□□ -1.98
ATXN3-225ENST00000554214 CNBPP62633 177 aaKnown RBP2.69□□□□□ -1.98
ATXN3-225ENST00000554214 DNAH17Q9UFH2 4485 aa2.69□□□□□ -1.98
ATXN3-225ENST00000554214 IGHV3OR16-8A0A075B7F1 116 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 ETDCA0A1B0GVM5 59 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 G3V318 75 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 MIR22HGQ0VDD5 57 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 MINOS1Q5TGZ0 78 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 NPBQ8NG41 125 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 C4orf3Q8WVX3 66 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 MINOS1-NBL1R4GNA1 71 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 HSPG2P98160 4391 aa2.68□□□□□ -1.98
ATXN3-225ENST00000554214 TRGV2A0A075B6R0 118 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 IGKV1D-37A0A075B6S9 117 aa2.67□□□□□ -1.98
ATXN3-225ENST00000554214 A0A087WSZ3 146 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms