RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
CCNK-203ENST00000553865 PSORS1C2Q9UIG4 136 aa5.8□□□□□ -1.48
CCNK-203ENST00000553865 CASC10Q5T4H9 136 aa5.8□□□□□ -1.48
CCNK-203ENST00000553865 Q5XG85 94 aa5.79□□□□□ -1.48
CCNK-203ENST00000553865 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
CCNK-203ENST00000553865 WDFY4Q6ZS81 3184 aa5.78□□□□□ -1.48
CCNK-203ENST00000553865 CFAP46Q8IYW2 2715 aa5.78□□□□□ -1.48
CCNK-203ENST00000553865 SPINK7P58062 85 aa5.78□□□□□ -1.48
CCNK-203ENST00000553865 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
CCNK-203ENST00000553865 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
CCNK-203ENST00000553865 ANAPC11Q9NYG5 84 aa5.76□□□□□ -1.49
CCNK-203ENST00000553865 DSPP15924 2871 aaKnown RBP5.75□□□□□ -1.49
CCNK-203ENST00000553865 MGAQ8IWI9 3026 aa5.75□□□□□ -1.49
CCNK-203ENST00000553865 HRES1P13985 223 aa5.75□□□□□ -1.49
CCNK-203ENST00000553865 MAST4O15021 2626 aa5.75□□□□□ -1.49
CCNK-203ENST00000553865 NBEAQ8NFP9 2946 aa5.75□□□□□ -1.49
CCNK-203ENST00000553865 USP24Q9UPU5 2620 aa5.74□□□□□ -1.49
CCNK-203ENST00000553865 ATRQ13535 2644 aa5.74□□□□□ -1.49
CCNK-203ENST00000553865 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
CCNK-203ENST00000553865 FRYLO94915 3013 aa5.72□□□□□ -1.49
CCNK-203ENST00000553865 MYO15AQ9UKN7 3530 aa5.72□□□□□ -1.49
CCNK-203ENST00000553865 EYSQ5T1H1 3165 aa5.72□□□□□ -1.49
CCNK-203ENST00000553865 Q6ZSA8 131 aa5.71□□□□□ -1.5
CCNK-203ENST00000553865 Q5VV11 94 aa5.71□□□□□ -1.5
CCNK-203ENST00000553865 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
CCNK-203ENST00000553865 FP248Q71RG6 208 aaPredicted RBP5.7□□□□□ -1.5
CCNK-203ENST00000553865 CHD6Q8TD26 2715 aa5.7□□□□□ -1.5
CCNK-203ENST00000553865 MGAM2Q2M2H8 2515 aa5.7□□□□□ -1.5
CCNK-203ENST00000553865 FRYQ5TBA9 3013 aa5.7□□□□□ -1.5
CCNK-203ENST00000553865 FLNAP21333 2647 aaKnown RBP5.7□□□□□ -1.5
CCNK-203ENST00000553865 REV3LO60673 3130 aa5.69□□□□□ -1.5
CCNK-203ENST00000553865 KRTAP16-1A8MUX0 517 aa5.69□□□□□ -1.5
CCNK-203ENST00000553865 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
CCNK-203ENST00000553865 SPRR1AP35321 89 aa5.68□□□□□ -1.5
CCNK-203ENST00000553865 MAP1AP78559 2803 aaPredicted RBP5.67□□□□□ -1.5
CCNK-203ENST00000553865 Q8NDZ9 215 aa5.67□□□□□ -1.5
CCNK-203ENST00000553865 AKAP13Q12802 2813 aa5.67□□□□□ -1.5
CCNK-203ENST00000553865 TEP1Q99973 2627 aaKnown RBP5.67□□□□□ -1.5
CCNK-203ENST00000553865 ROMO1P60602 79 aa5.67□□□□□ -1.5
CCNK-203ENST00000553865 SETXQ7Z333 2677 aaKnown RBP5.66□□□□□ -1.5
CCNK-203ENST00000553865 SPTBN5Q9NRC6 3674 aaKnown RBP5.66□□□□□ -1.5
CCNK-203ENST00000553865 ITPR3Q14573 2671 aa5.66□□□□□ -1.5
CCNK-203ENST00000553865 USP34Q70CQ2 3546 aa5.65□□□□□ -1.51
CCNK-203ENST00000553865 FREM2Q5SZK8 3169 aa5.65□□□□□ -1.51
CCNK-203ENST00000553865 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
CCNK-203ENST00000553865 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
CCNK-203ENST00000553865 S4R3F8 94 aa5.64□□□□□ -1.51
CCNK-203ENST00000553865 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
CCNK-203ENST00000553865 TNP2Q05952 138 aa5.63□□□□□ -1.51
CCNK-203ENST00000553865 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
CCNK-203ENST00000553865 COL6A3P12111 3177 aa5.63□□□□□ -1.51
CCNK-203ENST00000553865 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
CCNK-203ENST00000553865 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
CCNK-203ENST00000553865 R4GN34 69 aa5.61□□□□□ -1.51
CCNK-203ENST00000553865 IGSF10Q6WRI0 2623 aa5.61□□□□□ -1.51
CCNK-203ENST00000553865 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
CCNK-203ENST00000553865 SPRR1BP22528 89 aa5.6□□□□□ -1.51
CCNK-203ENST00000553865 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
CCNK-203ENST00000553865 M0R2T5 61 aa5.6□□□□□ -1.51
CCNK-203ENST00000553865 OXTP01178 125 aa5.59□□□□□ -1.52
CCNK-203ENST00000553865 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.52
CCNK-203ENST00000553865 STAB1Q9NY15 2570 aa5.58□□□□□ -1.52
CCNK-203ENST00000553865 BOD1L1Q8NFC6 3051 aa5.57□□□□□ -1.52
CCNK-203ENST00000553865 UNC79Q9P2D8 2635 aa5.57□□□□□ -1.52
CCNK-203ENST00000553865 Q5W150 140 aa5.57□□□□□ -1.52
CCNK-203ENST00000553865 FLNCQ14315 2725 aa5.57□□□□□ -1.52
CCNK-203ENST00000553865 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
CCNK-203ENST00000553865 BAHCC1Q9P281 2608 aa5.53□□□□□ -1.52
CCNK-203ENST00000553865 GCN1Q92616 2671 aaKnown RBP5.53□□□□□ -1.52
CCNK-203ENST00000553865 ADGRG4Q8IZF6 3080 aa5.51□□□□□ -1.53
CCNK-203ENST00000553865 COL6A5A8TX70 2615 aa5.51□□□□□ -1.53
CCNK-203ENST00000553865 KRTAP1-5Q9BYS1 174 aa5.51□□□□□ -1.53
CCNK-203ENST00000553865 KMT2BQ9UMN6 2715 aaPredicted RBP5.49□□□□□ -1.53
CCNK-203ENST00000553865 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
CCNK-203ENST00000553865 M0QZ58 72 aa5.48□□□□□ -1.53
CCNK-203ENST00000553865 WDFY3Q8IZQ1 3526 aa5.47□□□□□ -1.53
CCNK-203ENST00000553865 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
CCNK-203ENST00000553865 KALRNO60229 2985 aa5.47□□□□□ -1.53
CCNK-203ENST00000553865 TEX15Q9BXT5 2789 aa5.47□□□□□ -1.53
CCNK-203ENST00000553865 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
CCNK-203ENST00000553865 DMXL2Q8TDJ6 3036 aa5.46□□□□□ -1.54
CCNK-203ENST00000553865 CFAP47Q6ZTR5 3102 aa5.45□□□□□ -1.54
CCNK-203ENST00000553865 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
CCNK-203ENST00000553865 Q6ZR54 194 aa5.45□□□□□ -1.54
CCNK-203ENST00000553865 TACC2O95359 2948 aa5.45□□□□□ -1.54
CCNK-203ENST00000553865 LCE6AA0A183 80 aa5.44□□□□□ -1.54
CCNK-203ENST00000553865 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
CCNK-203ENST00000553865 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
CCNK-203ENST00000553865 SPATA8Q6RVD6 105 aa5.43□□□□□ -1.54
CCNK-203ENST00000553865 ATMQ13315 3056 aa5.42□□□□□ -1.54
CCNK-203ENST00000553865 UBR5O95071 2799 aaPredicted RBP5.41□□□□□ -1.54
CCNK-203ENST00000553865 COL12A1Q99715 3063 aa5.41□□□□□ -1.54
CCNK-203ENST00000553865 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
CCNK-203ENST00000553865 ITPR2Q14571 2701 aa5.41□□□□□ -1.54
CCNK-203ENST00000553865 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
CCNK-203ENST00000553865 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
CCNK-203ENST00000553865 ZZEF1O43149 2961 aa5.39□□□□□ -1.55
CCNK-203ENST00000553865 A6NN06 94 aa5.38□□□□□ -1.55
CCNK-203ENST00000553865 LRBAP50851 2863 aa5.38□□□□□ -1.55
CCNK-203ENST00000553865 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms