RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 DNAL4O96015 105 aa6.9□□□□□ -1.3
SNHG1-221ENST00000544983 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.3
SNHG1-221ENST00000544983 Q8N377 158 aa6.9□□□□□ -1.3
SNHG1-221ENST00000544983 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
SNHG1-221ENST00000544983 IGLV9-49A0A0B4J1Y8 123 aa6.89□□□□□ -1.31
SNHG1-221ENST00000544983 C3orf22Q8N5N4 141 aa6.89□□□□□ -1.31
SNHG1-221ENST00000544983 Q8NBF4 154 aa6.89□□□□□ -1.31
SNHG1-221ENST00000544983 F8WEM9 126 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 TRACP01848 142 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 MOBPQ13875 183 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 LINC00304Q8N9R0 145 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 CLEC2BQ92478 149 aa6.88□□□□□ -1.31
SNHG1-221ENST00000544983 LST1O00453 97 aa6.87□□□□□ -1.31
SNHG1-221ENST00000544983 C9orf153Q5TBE3 101 aa6.87□□□□□ -1.31
SNHG1-221ENST00000544983 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
SNHG1-221ENST00000544983 SNHG12Q9BXW3 62 aa6.87□□□□□ -1.31
SNHG1-221ENST00000544983 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
SNHG1-221ENST00000544983 TRBV20-1A0A075B6N2 111 aa6.86□□□□□ -1.31
SNHG1-221ENST00000544983 COL5A1-AS1Q5SY13 56 aa6.86□□□□□ -1.31
SNHG1-221ENST00000544983 ORMDL1Q9P0S3 153 aa6.86□□□□□ -1.31
SNHG1-221ENST00000544983 TNXBP22105 4242 aa6.85□□□□□ -1.31
SNHG1-221ENST00000544983 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
SNHG1-221ENST00000544983 TMEM256-PLSCR3K7ERE1 68 aa6.85□□□□□ -1.31
SNHG1-221ENST00000544983 SPINK1P00995 79 aa6.85□□□□□ -1.31
SNHG1-221ENST00000544983 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
SNHG1-221ENST00000544983 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
SNHG1-221ENST00000544983 H3BUT2 72 aa6.84□□□□□ -1.31
SNHG1-221ENST00000544983 ATXN8Q156A1 80 aa6.84□□□□□ -1.31
SNHG1-221ENST00000544983 TAX1BP3O14907 124 aa6.83□□□□□ -1.32
SNHG1-221ENST00000544983 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
SNHG1-221ENST00000544983 Q6JHZ5 121 aa6.83□□□□□ -1.32
SNHG1-221ENST00000544983 FABP2P12104 132 aa6.82□□□□□ -1.32
SNHG1-221ENST00000544983 CD164Q04900 197 aa6.82□□□□□ -1.32
SNHG1-221ENST00000544983 NAA38Q9BRA0 125 aaKnown RBP6.82□□□□□ -1.32
SNHG1-221ENST00000544983 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
SNHG1-221ENST00000544983 NDUFV3P56181 108 aaKnown RBP6.81□□□□□ -1.32
SNHG1-221ENST00000544983 TCL1BO95988 128 aa6.8□□□□□ -1.32
SNHG1-221ENST00000544983 UBE2V1Q13404 147 aa6.8□□□□□ -1.32
SNHG1-221ENST00000544983 H3BMG7 143 aa6.77□□□□□ -1.33
SNHG1-221ENST00000544983 BAALC-AS2P0C853 105 aa6.77□□□□□ -1.33
SNHG1-221ENST00000544983 LIMD2Q9BT23 127 aa6.76□□□□□ -1.33
SNHG1-221ENST00000544983 Q5XG85 94 aa6.75□□□□□ -1.33
SNHG1-221ENST00000544983 RNF213Q63HN8 5207 aa6.75□□□□□ -1.33
SNHG1-221ENST00000544983 IGFL1Q6UW32 110 aa6.74□□□□□ -1.33
SNHG1-221ENST00000544983 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
SNHG1-221ENST00000544983 SPCS1Q9Y6A9 102 aa6.74□□□□□ -1.33
SNHG1-221ENST00000544983 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
SNHG1-221ENST00000544983 C9JAW5 83 aa6.73□□□□□ -1.33
SNHG1-221ENST00000544983 Q6Q795 121 aa6.73□□□□□ -1.33
SNHG1-221ENST00000544983 JMJD7-PLA2G4BH0Y9G9 81 aa6.72□□□□□ -1.33
SNHG1-221ENST00000544983 H3BT86 120 aa6.72□□□□□ -1.33
SNHG1-221ENST00000544983 RBM3P98179 157 aaKnown RBP6.72□□□□□ -1.33
SNHG1-221ENST00000544983 TEN1Q86WV5 123 aa6.72□□□□□ -1.33
SNHG1-221ENST00000544983 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
SNHG1-221ENST00000544983 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
SNHG1-221ENST00000544983 FP248Q71RG6 208 aaPredicted RBP6.71□□□□□ -1.34
SNHG1-221ENST00000544983 TRBV7-7A0A0K0K1E9 115 aa6.7□□□□□ -1.34
SNHG1-221ENST00000544983 C21orf62-AS1Q17RA5 79 aa6.7□□□□□ -1.34
SNHG1-221ENST00000544983 DSCR8Q96T75 97 aa6.7□□□□□ -1.34
SNHG1-221ENST00000544983 PDE6GP18545 87 aa6.69□□□□□ -1.34
SNHG1-221ENST00000544983 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
SNHG1-221ENST00000544983 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 K7EP34 96 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 PRR4Q16378 134 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 SS18L2Q9UHA2 77 aa6.68□□□□□ -1.34
SNHG1-221ENST00000544983 A0A1B0GW54 56 aa6.65□□□□□ -1.34
SNHG1-221ENST00000544983 CCKP06307 115 aa6.65□□□□□ -1.34
SNHG1-221ENST00000544983 OBSCN-AS1Q96MR7 158 aa6.65□□□□□ -1.34
SNHG1-221ENST00000544983 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.34
SNHG1-221ENST00000544983 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
SNHG1-221ENST00000544983 LOC110117498A0A087WWA1 95 aa6.64□□□□□ -1.35
SNHG1-221ENST00000544983 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
SNHG1-221ENST00000544983 A0A1B0GV72 72 aa6.63□□□□□ -1.35
SNHG1-221ENST00000544983 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
SNHG1-221ENST00000544983 A0A087WSZ3 146 aa6.61□□□□□ -1.35
SNHG1-221ENST00000544983 F8W1H4 67 aa6.61□□□□□ -1.35
SNHG1-221ENST00000544983 C1orf195Q5TG92 126 aa6.61□□□□□ -1.35
SNHG1-221ENST00000544983 Q6ZQT0 140 aa6.6□□□□□ -1.35
SNHG1-221ENST00000544983 MTURNQ8N3F0 131 aa6.6□□□□□ -1.35
SNHG1-221ENST00000544983 PRO0461Q9UI25 63 aa6.6□□□□□ -1.35
SNHG1-221ENST00000544983 VPS25Q9BRG1 176 aa6.59□□□□□ -1.35
SNHG1-221ENST00000544983 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
SNHG1-221ENST00000544983 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-221ENST00000544983 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
SNHG1-221ENST00000544983 CDIP1Q9H305 208 aa6.54□□□□□ -1.36
SNHG1-221ENST00000544983 LRP2P98164 4655 aa6.52□□□□□ -1.37
SNHG1-221ENST00000544983 Q96NJ1 140 aa6.51□□□□□ -1.37
SNHG1-221ENST00000544983 LINC00472Q9H8W2 130 aa6.51□□□□□ -1.37
SNHG1-221ENST00000544983 J3KT08 172 aa6.5□□□□□ -1.37
SNHG1-221ENST00000544983 NREPQ16612 68 aa6.49□□□□□ -1.37
SNHG1-221ENST00000544983 ETDBQ3ZM63 59 aa6.49□□□□□ -1.37
SNHG1-221ENST00000544983 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
SNHG1-221ENST00000544983 A0A1B0GV90 55 aa6.47□□□□□ -1.37
SNHG1-221ENST00000544983 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
SNHG1-221ENST00000544983 XP32Q5T750 250 aa6.45□□□□□ -1.38
SNHG1-221ENST00000544983 NDUFB1O75438 58 aa6.44□□□□□ -1.38
SNHG1-221ENST00000544983 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms