RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 A0A1W2PNN7 141 aa5.78□□□□□ -1.48
NECAP1-207ENST00000544891 H7BZZ5 65 aa5.77□□□□□ -1.48
NECAP1-207ENST00000544891 MAST4O15021 2626 aa5.77□□□□□ -1.49
NECAP1-207ENST00000544891 HRNRQ86YZ3 2850 aaPredicted RBP5.77□□□□□ -1.49
NECAP1-207ENST00000544891 LOC400499M0QZD8 3231 aa5.76□□□□□ -1.49
NECAP1-207ENST00000544891 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
NECAP1-207ENST00000544891 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
NECAP1-207ENST00000544891 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
NECAP1-207ENST00000544891 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
NECAP1-207ENST00000544891 FLNAP21333 2647 aaKnown RBP5.73□□□□□ -1.49
NECAP1-207ENST00000544891 HELZ2Q9BYK8 2649 aaKnown RBP5.73□□□□□ -1.49
NECAP1-207ENST00000544891 CRIPTQ9P021 101 aa5.73□□□□□ -1.49
NECAP1-207ENST00000544891 Q1T7F1 81 aa5.73□□□□□ -1.49
NECAP1-207ENST00000544891 TNP2Q05952 138 aa5.73□□□□□ -1.49
NECAP1-207ENST00000544891 ATRQ13535 2644 aa5.72□□□□□ -1.49
NECAP1-207ENST00000544891 LAMA5O15230 3695 aa5.72□□□□□ -1.49
NECAP1-207ENST00000544891 CFAP47Q6ZTR5 3102 aa5.72□□□□□ -1.49
NECAP1-207ENST00000544891 MGAQ8IWI9 3026 aa5.71□□□□□ -1.49
NECAP1-207ENST00000544891 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.5
NECAP1-207ENST00000544891 FAM104AQ969W3 186 aa5.71□□□□□ -1.5
NECAP1-207ENST00000544891 ATMQ13315 3056 aa5.71□□□□□ -1.5
NECAP1-207ENST00000544891 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.5
NECAP1-207ENST00000544891 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.5
NECAP1-207ENST00000544891 CASC10Q5T4H9 136 aa5.7□□□□□ -1.5
NECAP1-207ENST00000544891 UBR5O95071 2799 aaPredicted RBP5.7□□□□□ -1.5
NECAP1-207ENST00000544891 ITPR3Q14573 2671 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 BOD1L1Q8NFC6 3051 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 ITPR1Q14643 2758 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 NBEAQ8NFP9 2946 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 A0A087X002 238 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 NOTCH2NLQ7Z3S9 236 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
NECAP1-207ENST00000544891 DCHS1Q96JQ0 3298 aa5.68□□□□□ -1.5
NECAP1-207ENST00000544891 SPRR1AP35321 89 aa5.68□□□□□ -1.5
NECAP1-207ENST00000544891 SPINT4Q6UDR6 99 aa5.68□□□□□ -1.5
NECAP1-207ENST00000544891 KALRNO60229 2985 aa5.67□□□□□ -1.5
NECAP1-207ENST00000544891 DMXL2Q8TDJ6 3036 aa5.67□□□□□ -1.5
NECAP1-207ENST00000544891 SPRR1BP22528 89 aa5.67□□□□□ -1.5
NECAP1-207ENST00000544891 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
NECAP1-207ENST00000544891 OXTP01178 125 aa5.66□□□□□ -1.5
NECAP1-207ENST00000544891 STAB1Q9NY15 2570 aa5.66□□□□□ -1.5
NECAP1-207ENST00000544891 PLAC8Q9NZF1 115 aa5.66□□□□□ -1.5
NECAP1-207ENST00000544891 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
NECAP1-207ENST00000544891 AKAP9Q99996 3911 aa5.65□□□□□ -1.5
NECAP1-207ENST00000544891 SMR3BP02814 79 aaPredicted RBP5.65□□□□□ -1.51
NECAP1-207ENST00000544891 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
NECAP1-207ENST00000544891 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
NECAP1-207ENST00000544891 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
NECAP1-207ENST00000544891 ZZEF1O43149 2961 aa5.63□□□□□ -1.51
NECAP1-207ENST00000544891 A0A0G2JQZ4 141 aa5.63□□□□□ -1.51
NECAP1-207ENST00000544891 Q75L30 129 aa5.62□□□□□ -1.51
NECAP1-207ENST00000544891 Q6ZSA8 131 aa5.59□□□□□ -1.51
NECAP1-207ENST00000544891 FP248Q71RG6 208 aaPredicted RBP5.59□□□□□ -1.51
NECAP1-207ENST00000544891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
NECAP1-207ENST00000544891 CFAP46Q8IYW2 2715 aa5.59□□□□□ -1.51
NECAP1-207ENST00000544891 LRBAP50851 2863 aa5.58□□□□□ -1.52
NECAP1-207ENST00000544891 IGSF10Q6WRI0 2623 aa5.58□□□□□ -1.52
NECAP1-207ENST00000544891 VPS13CQ709C8 3753 aa5.57□□□□□ -1.52
NECAP1-207ENST00000544891 MMP24-AS1A0A0U1RRL7 71 aa5.57□□□□□ -1.52
NECAP1-207ENST00000544891 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
NECAP1-207ENST00000544891 Q8N1X5 172 aa5.56□□□□□ -1.52
NECAP1-207ENST00000544891 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
NECAP1-207ENST00000544891 ZFHX3Q15911 3703 aa5.55□□□□□ -1.52
NECAP1-207ENST00000544891 HRES1P13985 223 aa5.55□□□□□ -1.52
NECAP1-207ENST00000544891 KMT2BQ9UMN6 2715 aaPredicted RBP5.54□□□□□ -1.52
NECAP1-207ENST00000544891 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
NECAP1-207ENST00000544891 ADGRG4Q8IZF6 3080 aa5.53□□□□□ -1.52
NECAP1-207ENST00000544891 A0A1B0GU33 70 aa5.53□□□□□ -1.52
NECAP1-207ENST00000544891 LINC00472Q9H8W2 130 aa5.53□□□□□ -1.52
NECAP1-207ENST00000544891 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
NECAP1-207ENST00000544891 FBN2P35556 2912 aa5.52□□□□□ -1.53
NECAP1-207ENST00000544891 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
NECAP1-207ENST00000544891 KRTAP26-1Q6PEX3 210 aa5.5□□□□□ -1.53
NECAP1-207ENST00000544891 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
NECAP1-207ENST00000544891 RELNP78509 3460 aa5.49□□□□□ -1.53
NECAP1-207ENST00000544891 MAP1AP78559 2803 aaPredicted RBP5.49□□□□□ -1.53
NECAP1-207ENST00000544891 CAMK2N1Q7Z7J9 78 aa5.49□□□□□ -1.53
NECAP1-207ENST00000544891 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
NECAP1-207ENST00000544891 Q8N9P0 234 aaPredicted RBP5.47□□□□□ -1.53
NECAP1-207ENST00000544891 PDZD2O15018 2839 aa5.47□□□□□ -1.53
NECAP1-207ENST00000544891 TEP1Q99973 2627 aaKnown RBP5.47□□□□□ -1.53
NECAP1-207ENST00000544891 NBPF19A0A087WUL8 3843 aa5.47□□□□□ -1.53
NECAP1-207ENST00000544891 CENPEQ02224 2701 aa5.46□□□□□ -1.53
NECAP1-207ENST00000544891 Q8NDZ9 215 aa5.46□□□□□ -1.53
NECAP1-207ENST00000544891 A0A0D9SG42 100 aa5.46□□□□□ -1.54
NECAP1-207ENST00000544891 LINC00483Q53H64 154 aa5.46□□□□□ -1.54
NECAP1-207ENST00000544891 Q5W150 140 aa5.45□□□□□ -1.54
NECAP1-207ENST00000544891 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
NECAP1-207ENST00000544891 LCE6AA0A183 80 aa5.45□□□□□ -1.54
NECAP1-207ENST00000544891 SVEP1Q4LDE5 3571 aa5.44□□□□□ -1.54
NECAP1-207ENST00000544891 A6NN06 94 aa5.43□□□□□ -1.54
NECAP1-207ENST00000544891 NBEAL1Q6ZS30 2694 aa5.43□□□□□ -1.54
NECAP1-207ENST00000544891 COL6A5A8TX70 2615 aa5.43□□□□□ -1.54
NECAP1-207ENST00000544891 TACC2O95359 2948 aa5.43□□□□□ -1.54
NECAP1-207ENST00000544891 SPINK7P58062 85 aa5.42□□□□□ -1.54
NECAP1-207ENST00000544891 S4R3F8 94 aa5.42□□□□□ -1.54
NECAP1-207ENST00000544891 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
NECAP1-207ENST00000544891 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
NECAP1-207ENST00000544891 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
NECAP1-207ENST00000544891 SETXQ7Z333 2677 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms