RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 Q8NDZ9 215 aa11.99□□□□□ -0.49
BPTF-208ENST00000544778 PRRC2CQ9Y520 2896 aaKnown RBP11.98□□□□□ -0.49
BPTF-208ENST00000544778 FP248Q71RG6 208 aaPredicted RBP11.97□□□□□ -0.49
BPTF-208ENST00000544778 KRTAP10-2P60368 255 aa11.96□□□□□ -0.5
BPTF-208ENST00000544778 SPRR1AP35321 89 aa11.95□□□□□ -0.5
BPTF-208ENST00000544778 OXTP01178 125 aa11.94□□□□□ -0.5
BPTF-208ENST00000544778 Q5XG85 94 aa11.94□□□□□ -0.5
BPTF-208ENST00000544778 KRTAP26-1Q6PEX3 210 aa11.92□□□□□ -0.5
BPTF-208ENST00000544778 LCE6AA0A183 80 aa11.91□□□□□ -0.5
BPTF-208ENST00000544778 CYSTM1Q9H1C7 97 aa11.88□□□□□ -0.51
BPTF-208ENST00000544778 DNAH12Q6ZR08 3092 aa11.87□□□□□ -0.51
BPTF-208ENST00000544778 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
BPTF-208ENST00000544778 C20orf166-AS1Q96NR2 134 aa11.86□□□□□ -0.51
BPTF-208ENST00000544778 Q6ZR54 194 aa11.86□□□□□ -0.51
BPTF-208ENST00000544778 SPRR1BP22528 89 aa11.84□□□□□ -0.51
BPTF-208ENST00000544778 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
BPTF-208ENST00000544778 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
BPTF-208ENST00000544778 EPG5Q9HCE0 2579 aa11.77□□□□□ -0.52
BPTF-208ENST00000544778 HECTD1Q9ULT8 2610 aa11.75□□□□□ -0.53
BPTF-208ENST00000544778 PANO1I0J062 215 aa11.72□□□□□ -0.53
BPTF-208ENST00000544778 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
BPTF-208ENST00000544778 ITPR3Q14573 2671 aa11.69□□□□□ -0.54
BPTF-208ENST00000544778 A8MUU9 505 aa11.67□□□□□ -0.54
BPTF-208ENST00000544778 CFAP46Q8IYW2 2715 aa11.67□□□□□ -0.54
BPTF-208ENST00000544778 A0A087X002 238 aa11.66□□□□□ -0.54
BPTF-208ENST00000544778 KRTAP16-1A8MUX0 517 aa11.64□□□□□ -0.55
BPTF-208ENST00000544778 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
BPTF-208ENST00000544778 ATRQ13535 2644 aa11.61□□□□□ -0.55
BPTF-208ENST00000544778 UTRNP46939 3433 aa11.58□□□□□ -0.56
BPTF-208ENST00000544778 DMBT1Q9UGM3 2413 aaPredicted RBP11.56□□□□□ -0.56
BPTF-208ENST00000544778 A8MU10 97 aa11.55□□□□□ -0.56
BPTF-208ENST00000544778 MAST4O15021 2626 aa11.54□□□□□ -0.56
BPTF-208ENST00000544778 AKAP13Q12802 2813 aa11.52□□□□□ -0.57
BPTF-208ENST00000544778 NOTCH2NLQ7Z3S9 236 aa11.49□□□□□ -0.57
BPTF-208ENST00000544778 NBEAL1Q6ZS30 2694 aa11.46□□□□□ -0.58
BPTF-208ENST00000544778 KRTAP25-1Q3LHN0 102 aa11.44□□□□□ -0.58
BPTF-208ENST00000544778 HELZ2Q9BYK8 2649 aaKnown RBP11.44□□□□□ -0.58
BPTF-208ENST00000544778 ASB16-AS1Q495Z4 193 aa11.43□□□□□ -0.58
BPTF-208ENST00000544778 C10orf95Q9H7T3 257 aa11.42□□□□□ -0.58
BPTF-208ENST00000544778 STAB1Q9NY15 2570 aa11.4□□□□□ -0.58
BPTF-208ENST00000544778 TNP1P09430 55 aa11.38□□□□□ -0.59
BPTF-208ENST00000544778 KRTAP29-1A8MX34 341 aaPredicted RBP11.37□□□□□ -0.59
BPTF-208ENST00000544778 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
BPTF-208ENST00000544778 CFAP54Q96N23 3096 aa11.34□□□□□ -0.59
BPTF-208ENST00000544778 CHD6Q8TD26 2715 aa11.33□□□□□ -0.6
BPTF-208ENST00000544778 PCNTO95613 3336 aa11.33□□□□□ -0.6
BPTF-208ENST00000544778 NDUFAF8A1L188 74 aa11.33□□□□□ -0.6
BPTF-208ENST00000544778 TEX15Q9BXT5 2789 aa11.32□□□□□ -0.6
BPTF-208ENST00000544778 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.61
BPTF-208ENST00000544778 KRTAP11-1Q8IUC1 163 aa11.25□□□□□ -0.61
BPTF-208ENST00000544778 A0A0C4DFX4 3053 aa11.24□□□□□ -0.61
BPTF-208ENST00000544778 CENPEQ02224 2701 aa11.22□□□□□ -0.61
BPTF-208ENST00000544778 KRTAP10-8P60410 259 aa11.17□□□□□ -0.62
BPTF-208ENST00000544778 A0A1B0GVY2 172 aa11.12□□□□□ -0.63
BPTF-208ENST00000544778 A6NN06 94 aa11.11□□□□□ -0.63
BPTF-208ENST00000544778 KRTAP13-2Q52LG2 175 aa11.11□□□□□ -0.63
BPTF-208ENST00000544778 STAB2Q8WWQ8 2551 aa11.09□□□□□ -0.63
BPTF-208ENST00000544778 UNC79Q9P2D8 2635 aa11.09□□□□□ -0.63
BPTF-208ENST00000544778 COL6A5A8TX70 2615 aa11.04□□□□□ -0.64
BPTF-208ENST00000544778 Q6ZRN7 208 aaPredicted RBP11.03□□□□□ -0.64
BPTF-208ENST00000544778 XIRP2A4UGR9 3374 aa10.97□□□□□ -0.65
BPTF-208ENST00000544778 MKI67P46013 3256 aaKnown RBP10.97□□□□□ -0.65
BPTF-208ENST00000544778 GCN1Q92616 2671 aaKnown RBP10.94□□□□□ -0.66
BPTF-208ENST00000544778 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
BPTF-208ENST00000544778 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
BPTF-208ENST00000544778 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
BPTF-208ENST00000544778 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
BPTF-208ENST00000544778 TRIOO75962 3097 aa10.88□□□□□ -0.67
BPTF-208ENST00000544778 FREM2Q5SZK8 3169 aa10.85□□□□□ -0.67
BPTF-208ENST00000544778 CELSR3Q9NYQ7 3312 aa10.85□□□□□ -0.67
BPTF-208ENST00000544778 CHD7Q9P2D1 2997 aa10.84□□□□□ -0.67
BPTF-208ENST00000544778 SETXQ7Z333 2677 aaKnown RBP10.84□□□□□ -0.67
BPTF-208ENST00000544778 NOTCH1P46531 2555 aa10.83□□□□□ -0.68
BPTF-208ENST00000544778 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
BPTF-208ENST00000544778 PP632Q6XCG6 107 aa10.81□□□□□ -0.68
BPTF-208ENST00000544778 KRTAP10-10P60014 251 aa10.81□□□□□ -0.68
BPTF-208ENST00000544778 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
BPTF-208ENST00000544778 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
BPTF-208ENST00000544778 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
BPTF-208ENST00000544778 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
BPTF-208ENST00000544778 PRO2289Q9P1D8 64 aa10.73□□□□□ -0.69
BPTF-208ENST00000544778 P0C880 135 aa10.73□□□□□ -0.69
BPTF-208ENST00000544778 UNC80Q8N2C7 3258 aa10.72□□□□□ -0.69
BPTF-208ENST00000544778 XP32Q5T750 250 aa10.69□□□□□ -0.7
BPTF-208ENST00000544778 BAHCC1Q9P281 2608 aa10.68□□□□□ -0.7
BPTF-208ENST00000544778 REV3LO60673 3130 aa10.67□□□□□ -0.7
BPTF-208ENST00000544778 CRYBG3Q68DQ2 2970 aa10.66□□□□□ -0.7
BPTF-208ENST00000544778 APCP25054 2843 aa10.64□□□□□ -0.71
BPTF-208ENST00000544778 WDFY4Q6ZS81 3184 aa10.63□□□□□ -0.71
BPTF-208ENST00000544778 ZNF292O60281 2723 aa10.61□□□□□ -0.71
BPTF-208ENST00000544778 PRUNE2Q8WUY3 3088 aa10.6□□□□□ -0.71
BPTF-208ENST00000544778 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
BPTF-208ENST00000544778 LAMA3Q16787 3333 aa10.54□□□□□ -0.72
BPTF-208ENST00000544778 HTTP42858 3142 aa10.51□□□□□ -0.73
BPTF-208ENST00000544778 IGSF10Q6WRI0 2623 aa10.49□□□□□ -0.73
BPTF-208ENST00000544778 H0YAA0 97 aa10.49□□□□□ -0.73
BPTF-208ENST00000544778 VPS13AQ96RL7 3174 aa10.49□□□□□ -0.73
BPTF-208ENST00000544778 KALRNO60229 2985 aa10.46□□□□□ -0.74
BPTF-208ENST00000544778 DNAH14Q0VDD8 3507 aa10.45□□□□□ -0.74
BPTF-208ENST00000544778 BRCA2P51587 3418 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms