RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 Q8NDZ9 215 aa8.01□□□□□ -1.13
CHD4-211ENST00000544484 WIPF1O43516 503 aa8.01□□□□□ -1.13
CHD4-211ENST00000544484 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
CHD4-211ENST00000544484 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
CHD4-211ENST00000544484 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
CHD4-211ENST00000544484 UBR5O95071 2799 aaPredicted RBP7.99□□□□□ -1.13
CHD4-211ENST00000544484 IGSF10Q6WRI0 2623 aa7.99□□□□□ -1.13
CHD4-211ENST00000544484 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
CHD4-211ENST00000544484 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
CHD4-211ENST00000544484 A0A0D9SG42 100 aa7.96□□□□□ -1.14
CHD4-211ENST00000544484 OCR1Q9BZK8 76 aa7.95□□□□□ -1.14
CHD4-211ENST00000544484 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
CHD4-211ENST00000544484 KRTAP1-5Q9BYS1 174 aa7.91□□□□□ -1.14
CHD4-211ENST00000544484 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
CHD4-211ENST00000544484 CD164Q04900 197 aa7.9□□□□□ -1.15
CHD4-211ENST00000544484 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
CHD4-211ENST00000544484 BAHCC1Q9P281 2608 aa7.89□□□□□ -1.15
CHD4-211ENST00000544484 PLAC8Q9NZF1 115 aa7.88□□□□□ -1.15
CHD4-211ENST00000544484 SZT2Q5T011 3432 aa7.88□□□□□ -1.15
CHD4-211ENST00000544484 TACC2O95359 2948 aa7.87□□□□□ -1.15
CHD4-211ENST00000544484 SPRR1AP35321 89 aa7.87□□□□□ -1.15
CHD4-211ENST00000544484 Q6ZSA8 131 aa7.87□□□□□ -1.15
CHD4-211ENST00000544484 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
CHD4-211ENST00000544484 LAMA1P25391 3075 aa7.86□□□□□ -1.15
CHD4-211ENST00000544484 VCANP13611 3396 aa7.86□□□□□ -1.15
CHD4-211ENST00000544484 DNAH14Q0VDD8 3507 aa7.85□□□□□ -1.15
CHD4-211ENST00000544484 HRES1P13985 223 aa7.85□□□□□ -1.15
CHD4-211ENST00000544484 KALRNO60229 2985 aa7.83□□□□□ -1.16
CHD4-211ENST00000544484 DMXL2Q8TDJ6 3036 aa7.83□□□□□ -1.16
CHD4-211ENST00000544484 MMP24-AS1A0A0U1RRL7 71 aa7.83□□□□□ -1.16
CHD4-211ENST00000544484 ATMQ13315 3056 aa7.82□□□□□ -1.16
CHD4-211ENST00000544484 NSD1Q96L73 2696 aaPredicted RBP7.82□□□□□ -1.16
CHD4-211ENST00000544484 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
CHD4-211ENST00000544484 Q8N9P0 234 aaPredicted RBP7.81□□□□□ -1.16
CHD4-211ENST00000544484 FRYLO94915 3013 aa7.81□□□□□ -1.16
CHD4-211ENST00000544484 ITPR1Q14643 2758 aa7.81□□□□□ -1.16
CHD4-211ENST00000544484 KRTAP26-1Q6PEX3 210 aa7.8□□□□□ -1.16
CHD4-211ENST00000544484 REV3LO60673 3130 aa7.8□□□□□ -1.16
CHD4-211ENST00000544484 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
CHD4-211ENST00000544484 FLNCQ14315 2725 aa7.78□□□□□ -1.16
CHD4-211ENST00000544484 CDC42SE1Q9NRR8 79 aa7.78□□□□□ -1.16
CHD4-211ENST00000544484 COL12A1Q99715 3063 aa7.78□□□□□ -1.16
CHD4-211ENST00000544484 BOD1L1Q8NFC6 3051 aa7.77□□□□□ -1.17
CHD4-211ENST00000544484 NBEAQ8NFP9 2946 aa7.76□□□□□ -1.17
CHD4-211ENST00000544484 ITPR2Q14571 2701 aa7.76□□□□□ -1.17
CHD4-211ENST00000544484 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
CHD4-211ENST00000544484 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
CHD4-211ENST00000544484 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
CHD4-211ENST00000544484 ZCCHC13Q8WW36 166 aaKnown RBP7.75□□□□□ -1.17
CHD4-211ENST00000544484 KTN1-AS1Q86SY8 53 aa7.74□□□□□ -1.17
CHD4-211ENST00000544484 SPRR1BP22528 89 aa7.74□□□□□ -1.17
CHD4-211ENST00000544484 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
CHD4-211ENST00000544484 ADGRG4Q8IZF6 3080 aa7.73□□□□□ -1.17
CHD4-211ENST00000544484 Q1T7F1 81 aa7.73□□□□□ -1.17
CHD4-211ENST00000544484 A0A1B0GU33 70 aa7.72□□□□□ -1.17
CHD4-211ENST00000544484 M0R2T5 61 aa7.71□□□□□ -1.18
CHD4-211ENST00000544484 PANO1I0J062 215 aa7.7□□□□□ -1.18
CHD4-211ENST00000544484 COL6A3P12111 3177 aa7.7□□□□□ -1.18
CHD4-211ENST00000544484 Q5W150 140 aa7.7□□□□□ -1.18
CHD4-211ENST00000544484 ASH1LQ9NR48 2969 aaKnown RBP7.69□□□□□ -1.18
CHD4-211ENST00000544484 LCA10Q71F78 164 aa7.68□□□□□ -1.18
CHD4-211ENST00000544484 LRBAP50851 2863 aa7.67□□□□□ -1.18
CHD4-211ENST00000544484 DMBT1Q9UGM3 2413 aaPredicted RBP7.67□□□□□ -1.18
CHD4-211ENST00000544484 Q5VSD8 79 aa7.67□□□□□ -1.18
CHD4-211ENST00000544484 SPINK7P58062 85 aa7.66□□□□□ -1.18
CHD4-211ENST00000544484 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
CHD4-211ENST00000544484 UTP20O75691 2785 aaKnown RBP7.65□□□□□ -1.19
CHD4-211ENST00000544484 LCE6AA0A183 80 aa7.64□□□□□ -1.19
CHD4-211ENST00000544484 CFAP47Q6ZTR5 3102 aa7.64□□□□□ -1.19
CHD4-211ENST00000544484 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
CHD4-211ENST00000544484 Q75L30 129 aa7.61□□□□□ -1.19
CHD4-211ENST00000544484 S4R3F8 94 aa7.61□□□□□ -1.19
CHD4-211ENST00000544484 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
CHD4-211ENST00000544484 FP248Q71RG6 208 aaPredicted RBP7.6□□□□□ -1.19
CHD4-211ENST00000544484 KRTAP4-16G5E9R7 235 aaPredicted RBP7.59□□□□□ -1.19
CHD4-211ENST00000544484 HIVEP1P15822 2718 aa7.59□□□□□ -1.19
CHD4-211ENST00000544484 CRYBG3Q68DQ2 2970 aa7.58□□□□□ -1.2
CHD4-211ENST00000544484 Q5XG85 94 aa7.57□□□□□ -1.2
CHD4-211ENST00000544484 ZZEF1O43149 2961 aa7.57□□□□□ -1.2
CHD4-211ENST00000544484 Q6ZR54 194 aa7.56□□□□□ -1.2
CHD4-211ENST00000544484 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
CHD4-211ENST00000544484 A0A087X002 238 aa7.55□□□□□ -1.2
CHD4-211ENST00000544484 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
CHD4-211ENST00000544484 SPEGQ15772 3267 aa7.54□□□□□ -1.2
CHD4-211ENST00000544484 CELSR2Q9HCU4 2923 aa7.53□□□□□ -1.2
CHD4-211ENST00000544484 Q5VV11 94 aa7.53□□□□□ -1.2
CHD4-211ENST00000544484 APCP25054 2843 aa7.52□□□□□ -1.21
CHD4-211ENST00000544484 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
CHD4-211ENST00000544484 KRTAP11-1Q8IUC1 163 aa7.51□□□□□ -1.21
CHD4-211ENST00000544484 KMT2BQ9UMN6 2715 aaPredicted RBP7.51□□□□□ -1.21
CHD4-211ENST00000544484 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
CHD4-211ENST00000544484 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
CHD4-211ENST00000544484 R4GN34 69 aa7.5□□□□□ -1.21
CHD4-211ENST00000544484 TENM4Q6N022 2769 aa7.49□□□□□ -1.21
CHD4-211ENST00000544484 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
CHD4-211ENST00000544484 NOTCH2NLQ7Z3S9 236 aa7.47□□□□□ -1.21
CHD4-211ENST00000544484 OXTP01178 125 aa7.46□□□□□ -1.21
CHD4-211ENST00000544484 KRTAP29-1A8MX34 341 aaPredicted RBP7.44□□□□□ -1.22
CHD4-211ENST00000544484 Q6ZRN7 208 aaPredicted RBP7.43□□□□□ -1.22
CHD4-211ENST00000544484 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms