RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.28□□□□□ -0.44
OTUB1-212ENST00000543988 A0A0G2JQZ4 141 aa12.26□□□□□ -0.45
OTUB1-212ENST00000543988 K7ERJ3 54 aa12.25□□□□□ -0.45
OTUB1-212ENST00000543988 FAM218AQ96MZ4 157 aa12.25□□□□□ -0.45
OTUB1-212ENST00000543988 CD164Q04900 197 aa12.24□□□□□ -0.45
OTUB1-212ENST00000543988 F8WEM9 126 aa12.23□□□□□ -0.45
OTUB1-212ENST00000543988 H0YGX0 51 aa12.23□□□□□ -0.45
OTUB1-212ENST00000543988 LIMD2Q9BT23 127 aa12.23□□□□□ -0.45
OTUB1-212ENST00000543988 CDIP1Q9H305 208 aa12.23□□□□□ -0.45
OTUB1-212ENST00000543988 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
OTUB1-212ENST00000543988 TRIAP1O43715 76 aa12.2□□□□□ -0.46
OTUB1-212ENST00000543988 PPDPFLQ8WWR9 84 aa12.19□□□□□ -0.46
OTUB1-212ENST00000543988 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
OTUB1-212ENST00000543988 IGLV8-61A0A075B6I0 122 aa12.16□□□□□ -0.46
OTUB1-212ENST00000543988 SNCGO76070 127 aa12.16□□□□□ -0.46
OTUB1-212ENST00000543988 OCIAD2Q56VL3 154 aa12.14□□□□□ -0.47
OTUB1-212ENST00000543988 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
OTUB1-212ENST00000543988 Q5XG85 94 aa12.13□□□□□ -0.47
OTUB1-212ENST00000543988 Q6JHZ5 121 aa12.13□□□□□ -0.47
OTUB1-212ENST00000543988 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
OTUB1-212ENST00000543988 A0A1B0GX51 115 aa12.12□□□□□ -0.47
OTUB1-212ENST00000543988 PSMB2P49721 201 aa12.12□□□□□ -0.47
OTUB1-212ENST00000543988 IGFL1Q6UW32 110 aa12.12□□□□□ -0.47
OTUB1-212ENST00000543988 H3BUT2 72 aa12.11□□□□□ -0.47
OTUB1-212ENST00000543988 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
OTUB1-212ENST00000543988 MUC2Q02817 5179 aa12.07□□□□□ -0.48
OTUB1-212ENST00000543988 LOC105371267A0A1B0GV96 52 aa12.05□□□□□ -0.48
OTUB1-212ENST00000543988 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
OTUB1-212ENST00000543988 C1orf195Q5TG92 126 aa12.05□□□□□ -0.48
OTUB1-212ENST00000543988 COX6CP09669 75 aa12.04□□□□□ -0.48
OTUB1-212ENST00000543988 TRBV7-7A0A0K0K1E9 115 aa12.03□□□□□ -0.48
OTUB1-212ENST00000543988 FABP2P12104 132 aa12.03□□□□□ -0.48
OTUB1-212ENST00000543988 TCL1BO95988 128 aa12.02□□□□□ -0.49
OTUB1-212ENST00000543988 M0R143 59 aa12.01□□□□□ -0.49
OTUB1-212ENST00000543988 DNAL4O96015 105 aa12.01□□□□□ -0.49
OTUB1-212ENST00000543988 GHRHP01286 108 aa12.01□□□□□ -0.49
OTUB1-212ENST00000543988 XP32Q5T750 250 aa11.99□□□□□ -0.49
OTUB1-212ENST00000543988 ORMDL1Q9P0S3 153 aa11.98□□□□□ -0.49
OTUB1-212ENST00000543988 H3BMG7 143 aa11.97□□□□□ -0.49
OTUB1-212ENST00000543988 C9orf92A6NGG3 77 aa11.96□□□□□ -0.49
OTUB1-212ENST00000543988 TSTD3H0UI37 97 aa11.96□□□□□ -0.49
OTUB1-212ENST00000543988 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
OTUB1-212ENST00000543988 ASB16-AS1Q495Z4 193 aa11.95□□□□□ -0.5
OTUB1-212ENST00000543988 LST1O00453 97 aa11.94□□□□□ -0.5
OTUB1-212ENST00000543988 TRACP01848 142 aa11.93□□□□□ -0.5
OTUB1-212ENST00000543988 Q6Q795 121 aa11.92□□□□□ -0.5
OTUB1-212ENST00000543988 H3BQ85 93 aa11.91□□□□□ -0.5
OTUB1-212ENST00000543988 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
OTUB1-212ENST00000543988 A0A1B0GV72 72 aa11.9□□□□□ -0.5
OTUB1-212ENST00000543988 SEC61BP60468 96 aaKnown RBP11.9□□□□□ -0.5
OTUB1-212ENST00000543988 TEN1Q86WV5 123 aa11.9□□□□□ -0.5
OTUB1-212ENST00000543988 TMEM256-PLSCR3K7ERE1 68 aa11.89□□□□□ -0.51
OTUB1-212ENST00000543988 A0A1W2PNM2 257 aa11.85□□□□□ -0.51
OTUB1-212ENST00000543988 BATFQ16520 125 aa11.85□□□□□ -0.51
OTUB1-212ENST00000543988 SS18L2Q9UHA2 77 aa11.85□□□□□ -0.51
OTUB1-212ENST00000543988 A0A087WSZ3 146 aa11.84□□□□□ -0.51
OTUB1-212ENST00000543988 UBE2V1Q13404 147 aa11.84□□□□□ -0.51
OTUB1-212ENST00000543988 ANKRD29Q8N6D5 301 aa11.83□□□□□ -0.52
OTUB1-212ENST00000543988 KRTAP4-1Q9BYQ7 146 aa11.82□□□□□ -0.52
OTUB1-212ENST00000543988 A0A0U1RQV1 116 aa11.81□□□□□ -0.52
OTUB1-212ENST00000543988 ATXN8Q156A1 80 aa11.79□□□□□ -0.52
OTUB1-212ENST00000543988 FAT4Q6V0I7 4981 aa11.79□□□□□ -0.52
OTUB1-212ENST00000543988 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.53
OTUB1-212ENST00000543988 TRBV7-4A0A0J9YYF1 115 aa11.76□□□□□ -0.53
OTUB1-212ENST00000543988 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
OTUB1-212ENST00000543988 Q96NJ1 140 aa11.75□□□□□ -0.53
OTUB1-212ENST00000543988 CCKP06307 115 aa11.74□□□□□ -0.53
OTUB1-212ENST00000543988 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
OTUB1-212ENST00000543988 RPL37P61927 97 aaKnown RBP11.71□□□□□ -0.53
OTUB1-212ENST00000543988 RBM3P98179 157 aaKnown RBP11.71□□□□□ -0.53
OTUB1-212ENST00000543988 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.53
OTUB1-212ENST00000543988 TAX1BP3O14907 124 aa11.68□□□□□ -0.54
OTUB1-212ENST00000543988 DSCR8Q96T75 97 aa11.68□□□□□ -0.54
OTUB1-212ENST00000543988 VPS25Q9BRG1 176 aa11.67□□□□□ -0.54
OTUB1-212ENST00000543988 TRBV20-1A0A075B6N2 111 aa11.66□□□□□ -0.54
OTUB1-212ENST00000543988 C9orf118A6NHY6 69 aa11.66□□□□□ -0.54
OTUB1-212ENST00000543988 SIGMAR1Q99720 223 aa11.66□□□□□ -0.54
OTUB1-212ENST00000543988 C9JAW5 83 aa11.63□□□□□ -0.55
OTUB1-212ENST00000543988 A0A1W2PPM0 123 aa11.61□□□□□ -0.55
OTUB1-212ENST00000543988 LINC00472Q9H8W2 130 aa11.61□□□□□ -0.55
OTUB1-212ENST00000543988 IGKV4-1P06312 121 aa11.6□□□□□ -0.55
OTUB1-212ENST00000543988 JMJD7-PLA2G4BH0Y9G9 81 aa11.59□□□□□ -0.55
OTUB1-212ENST00000543988 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
OTUB1-212ENST00000543988 DEFB116Q30KQ4 102 aa11.58□□□□□ -0.56
OTUB1-212ENST00000543988 Q75L30 129 aa11.58□□□□□ -0.56
OTUB1-212ENST00000543988 Q6ZQT0 140 aa11.57□□□□□ -0.56
OTUB1-212ENST00000543988 LOC110117498A0A087WWA1 95 aa11.56□□□□□ -0.56
OTUB1-212ENST00000543988 DSCR10P59022 87 aa11.56□□□□□ -0.56
OTUB1-212ENST00000543988 C14orf132Q9NPU4 83 aa11.54□□□□□ -0.56
OTUB1-212ENST00000543988 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
OTUB1-212ENST00000543988 C21orf62-AS1Q17RA5 79 aa11.51□□□□□ -0.57
OTUB1-212ENST00000543988 C20orf166-AS1Q96NR2 134 aa11.51□□□□□ -0.57
OTUB1-212ENST00000543988 H3BT86 120 aa11.5□□□□□ -0.57
OTUB1-212ENST00000543988 PDE6GP18545 87 aa11.5□□□□□ -0.57
OTUB1-212ENST00000543988 A8MUU9 505 aa11.49□□□□□ -0.57
OTUB1-212ENST00000543988 COL5A1-AS1Q5SY13 56 aa11.49□□□□□ -0.57
OTUB1-212ENST00000543988 KRTAP19-2Q3LHN2 52 aa11.48□□□□□ -0.57
OTUB1-212ENST00000543988 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
OTUB1-212ENST00000543988 LINC00313P59037 77 aa11.47□□□□□ -0.57
OTUB1-212ENST00000543988 NOTCH2NLQ7Z3S9 236 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms