RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 hDV103S1A0JD37 113 aa9.4□□□□□ -0.91
DDX55-209ENST00000542286 UBE2BP63146 152 aa9.4□□□□□ -0.91
DDX55-209ENST00000542286 SMIM29Q86T20 159 aa9.39□□□□□ -0.91
DDX55-209ENST00000542286 PRLHP81277 87 aa9.39□□□□□ -0.91
DDX55-209ENST00000542286 TGP01266 2768 aa9.39□□□□□ -0.91
DDX55-209ENST00000542286 DNHD1Q96M86 4753 aa9.38□□□□□ -0.91
DDX55-209ENST00000542286 MEGF8Q7Z7M0 2845 aa9.38□□□□□ -0.91
DDX55-209ENST00000542286 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
DDX55-209ENST00000542286 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
DDX55-209ENST00000542286 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
DDX55-209ENST00000542286 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
DDX55-209ENST00000542286 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
DDX55-209ENST00000542286 APLNQ9ULZ1 77 aa9.35□□□□□ -0.91
DDX55-209ENST00000542286 SPRR1AP35321 89 aa9.34□□□□□ -0.91
DDX55-209ENST00000542286 PLA2G2DQ9UNK4 145 aa9.34□□□□□ -0.91
DDX55-209ENST00000542286 A0A1W2PNM2 257 aa9.34□□□□□ -0.91
DDX55-209ENST00000542286 Q1T7F1 81 aa9.34□□□□□ -0.91
DDX55-209ENST00000542286 LCE6AA0A183 80 aa9.33□□□□□ -0.92
DDX55-209ENST00000542286 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
DDX55-209ENST00000542286 REG3GQ6UW15 175 aa9.32□□□□□ -0.92
DDX55-209ENST00000542286 PHF5AQ7RTV0 110 aaKnown RBP9.32□□□□□ -0.92
DDX55-209ENST00000542286 DHRS4-AS1Q9P1J3 65 aa9.32□□□□□ -0.92
DDX55-209ENST00000542286 PSPHP1O15172 72 aa9.31□□□□□ -0.92
DDX55-209ENST00000542286 PMAIP1Q13794 54 aa9.31□□□□□ -0.92
DDX55-209ENST00000542286 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
DDX55-209ENST00000542286 IGLV5-48A0A075B6I7 105 aa9.29□□□□□ -0.92
DDX55-209ENST00000542286 PANO1I0J062 215 aa9.29□□□□□ -0.92
DDX55-209ENST00000542286 ZCCHC13Q8WW36 166 aaKnown RBP9.29□□□□□ -0.92
DDX55-209ENST00000542286 DNAH2Q9P225 4427 aa9.28□□□□□ -0.92
DDX55-209ENST00000542286 PRR4Q16378 134 aa9.28□□□□□ -0.92
DDX55-209ENST00000542286 DEFB116Q30KQ4 102 aa9.28□□□□□ -0.92
DDX55-209ENST00000542286 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
DDX55-209ENST00000542286 C16orf90A8MZG2 172 aa9.27□□□□□ -0.93
DDX55-209ENST00000542286 TNP2Q05952 138 aa9.27□□□□□ -0.93
DDX55-209ENST00000542286 VPS13DQ5THJ4 4388 aa9.26□□□□□ -0.93
DDX55-209ENST00000542286 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
DDX55-209ENST00000542286 DSCR10P59022 87 aa9.24□□□□□ -0.93
DDX55-209ENST00000542286 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
DDX55-209ENST00000542286 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
DDX55-209ENST00000542286 B9D2Q9BPU9 175 aa9.24□□□□□ -0.93
DDX55-209ENST00000542286 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
DDX55-209ENST00000542286 A0A1B0GW54 56 aa9.23□□□□□ -0.93
DDX55-209ENST00000542286 K7EQZ3 153 aa9.23□□□□□ -0.93
DDX55-209ENST00000542286 CYP4F30PQ9H0H9 118 aa9.22□□□□□ -0.93
DDX55-209ENST00000542286 Q8NBF4 154 aa9.21□□□□□ -0.93
DDX55-209ENST00000542286 NBDYA0A0U1RRE5 68 aa9.21□□□□□ -0.94
DDX55-209ENST00000542286 A8MUN3 132 aa9.2□□□□□ -0.94
DDX55-209ENST00000542286 IGFL1Q6UW32 110 aa9.19□□□□□ -0.94
DDX55-209ENST00000542286 FBN3Q75N90 2809 aa9.19□□□□□ -0.94
DDX55-209ENST00000542286 SPRR4Q96PI1 79 aa9.17□□□□□ -0.94
DDX55-209ENST00000542286 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
DDX55-209ENST00000542286 A8MU10 97 aa9.16□□□□□ -0.94
DDX55-209ENST00000542286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
DDX55-209ENST00000542286 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
DDX55-209ENST00000542286 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
DDX55-209ENST00000542286 A0A087WSZ3 146 aa9.15□□□□□ -0.95
DDX55-209ENST00000542286 NDUFB1O75438 58 aa9.14□□□□□ -0.95
DDX55-209ENST00000542286 UBE2AP49459 152 aa9.14□□□□□ -0.95
DDX55-209ENST00000542286 RPL37AP61513 92 aaKnown RBP9.13□□□□□ -0.95
DDX55-209ENST00000542286 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
DDX55-209ENST00000542286 DNAH17Q9UFH2 4485 aa9.13□□□□□ -0.95
DDX55-209ENST00000542286 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
DDX55-209ENST00000542286 Q5VV11 94 aa9.12□□□□□ -0.95
DDX55-209ENST00000542286 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
DDX55-209ENST00000542286 MP68P56378 58 aa9.11□□□□□ -0.95
DDX55-209ENST00000542286 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
DDX55-209ENST00000542286 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
DDX55-209ENST00000542286 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
DDX55-209ENST00000542286 CHKB-CPT1BH3BT56 60 aa9.07□□□□□ -0.96
DDX55-209ENST00000542286 CD164Q04900 197 aa9.07□□□□□ -0.96
DDX55-209ENST00000542286 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
DDX55-209ENST00000542286 Q8N9P0 234 aaPredicted RBP9.06□□□□□ -0.96
DDX55-209ENST00000542286 A0A087WTM6 91 aa9.04□□□□□ -0.96
DDX55-209ENST00000542286 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
DDX55-209ENST00000542286 DNAH11Q96DT5 4516 aa9.04□□□□□ -0.96
DDX55-209ENST00000542286 LIMD2Q9BT23 127 aa9.03□□□□□ -0.96
DDX55-209ENST00000542286 PRR15LQ9BU68 103 aa9.02□□□□□ -0.96
DDX55-209ENST00000542286 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
DDX55-209ENST00000542286 HYDINQ4G0P3 5121 aa9.01□□□□□ -0.97
DDX55-209ENST00000542286 SPANXA2-OT1Q8N9U9 137 aa9.01□□□□□ -0.97
DDX55-209ENST00000542286 H0Y9P7 68 aa9.01□□□□□ -0.97
DDX55-209ENST00000542286 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
DDX55-209ENST00000542286 RTL8CO15255 209 aa9□□□□□ -0.97
DDX55-209ENST00000542286 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
DDX55-209ENST00000542286 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
DDX55-209ENST00000542286 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
DDX55-209ENST00000542286 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
DDX55-209ENST00000542286 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
DDX55-209ENST00000542286 LCA10Q71F78 164 aa8.96□□□□□ -0.97
DDX55-209ENST00000542286 CASC2Q6XLA1 102 aa8.96□□□□□ -0.98
DDX55-209ENST00000542286 PSORS1C2Q9UIG4 136 aa8.96□□□□□ -0.98
DDX55-209ENST00000542286 H0Y9J4 135 aa8.95□□□□□ -0.98
DDX55-209ENST00000542286 LY6G6CO95867 125 aa8.95□□□□□ -0.98
DDX55-209ENST00000542286 H3BPC8 53 aa8.95□□□□□ -0.98
DDX55-209ENST00000542286 SPRR1BP22528 89 aa8.95□□□□□ -0.98
DDX55-209ENST00000542286 A6NED7 52 aa8.94□□□□□ -0.98
DDX55-209ENST00000542286 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
DDX55-209ENST00000542286 ALMS1Q8TCU4 4167 aa8.93□□□□□ -0.98
DDX55-209ENST00000542286 Q6ZR54 194 aa8.93□□□□□ -0.98
DDX55-209ENST00000542286 Q75L30 129 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms