RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
VTN-202ENST00000539746 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
VTN-202ENST00000539746 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
VTN-202ENST00000539746 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
VTN-202ENST00000539746 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
VTN-202ENST00000539746 CRYGAP11844 174 aa7.18□□□□□ -1.26
VTN-202ENST00000539746 Q8NBF4 154 aa7.18□□□□□ -1.26
VTN-202ENST00000539746 SSBP3-AS1Q7Z2R9 100 aa7.17□□□□□ -1.26
VTN-202ENST00000539746 ST20-AS1Q8NBB2 130 aa7.17□□□□□ -1.26
VTN-202ENST00000539746 PKD1P98161 4303 aa7.17□□□□□ -1.26
VTN-202ENST00000539746 TRBV7-4A0A0J9YYF1 115 aa7.16□□□□□ -1.26
VTN-202ENST00000539746 CCKP06307 115 aa7.16□□□□□ -1.26
VTN-202ENST00000539746 LINC01547P58512 204 aaPredicted RBP7.16□□□□□ -1.26
VTN-202ENST00000539746 C9orf153Q5TBE3 101 aa7.16□□□□□ -1.26
VTN-202ENST00000539746 Q6Q795 121 aa7.16□□□□□ -1.26
VTN-202ENST00000539746 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.26
VTN-202ENST00000539746 SS18L2Q9UHA2 77 aa7.15□□□□□ -1.26
VTN-202ENST00000539746 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
VTN-202ENST00000539746 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
VTN-202ENST00000539746 CD164Q04900 197 aa7.13□□□□□ -1.27
VTN-202ENST00000539746 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
VTN-202ENST00000539746 IMUPQ9GZP8 106 aa7.13□□□□□ -1.27
VTN-202ENST00000539746 DNAH5Q8TE73 4624 aa7.12□□□□□ -1.27
VTN-202ENST00000539746 HAMPP81172 84 aa7.12□□□□□ -1.27
VTN-202ENST00000539746 Q6ZQT0 140 aa7.12□□□□□ -1.27
VTN-202ENST00000539746 SMR3BP02814 79 aaPredicted RBP7.11□□□□□ -1.27
VTN-202ENST00000539746 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
VTN-202ENST00000539746 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
VTN-202ENST00000539746 IGLV9-49A0A0B4J1Y8 123 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 Q5VSD8 79 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 Q8N1X5 172 aa7.1□□□□□ -1.27
VTN-202ENST00000539746 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
VTN-202ENST00000539746 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.28
VTN-202ENST00000539746 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
VTN-202ENST00000539746 MOBPQ13875 183 aa7.07□□□□□ -1.28
VTN-202ENST00000539746 A0A1B0GV72 72 aa7.06□□□□□ -1.28
VTN-202ENST00000539746 IGFL1Q6UW32 110 aa7.06□□□□□ -1.28
VTN-202ENST00000539746 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
VTN-202ENST00000539746 TYMSOSQ8TAI1 123 aa7.06□□□□□ -1.28
VTN-202ENST00000539746 NREPQ16612 68 aa7.05□□□□□ -1.28
VTN-202ENST00000539746 DYNC1H1Q14204 4646 aaKnown RBP7.05□□□□□ -1.28
VTN-202ENST00000539746 PKHD1P08F94 4074 aa7.05□□□□□ -1.28
VTN-202ENST00000539746 J3KT08 172 aa7.04□□□□□ -1.28
VTN-202ENST00000539746 SPINK1P00995 79 aa7.04□□□□□ -1.28
VTN-202ENST00000539746 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
VTN-202ENST00000539746 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
VTN-202ENST00000539746 KRTAP1-4P0C5Y4 121 aa7□□□□□ -1.29
VTN-202ENST00000539746 OXTP01178 125 aa6.99□□□□□ -1.29
VTN-202ENST00000539746 KRTAP10-4P60372 401 aaPredicted RBP6.99□□□□□ -1.29
VTN-202ENST00000539746 CXCL6P80162 114 aa6.99□□□□□ -1.29
VTN-202ENST00000539746 Q5XG85 94 aa6.99□□□□□ -1.29
VTN-202ENST00000539746 A0A1W2PNM2 257 aa6.98□□□□□ -1.29
VTN-202ENST00000539746 LINC00304Q8N9R0 145 aa6.98□□□□□ -1.29
VTN-202ENST00000539746 A0A087WSZ3 146 aa6.97□□□□□ -1.29
VTN-202ENST00000539746 BPY2O14599 106 aa6.97□□□□□ -1.29
VTN-202ENST00000539746 NDUFB1O75438 58 aa6.97□□□□□ -1.29
VTN-202ENST00000539746 ASB16-AS1Q495Z4 193 aa6.97□□□□□ -1.29
VTN-202ENST00000539746 ANAPC13Q9BS18 74 aa6.97□□□□□ -1.29
VTN-202ENST00000539746 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.29
VTN-202ENST00000539746 LINC00846Q9NV44 126 aa6.96□□□□□ -1.3
VTN-202ENST00000539746 Q6ZVQ6 151 aa6.95□□□□□ -1.3
VTN-202ENST00000539746 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
VTN-202ENST00000539746 A0A087X002 238 aa6.94□□□□□ -1.3
VTN-202ENST00000539746 RYR1P21817 5038 aa6.93□□□□□ -1.3
VTN-202ENST00000539746 APOBP04114 4563 aaKnown RBP6.93□□□□□ -1.3
VTN-202ENST00000539746 KRTAP13-2Q52LG2 175 aa6.92□□□□□ -1.3
VTN-202ENST00000539746 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
VTN-202ENST00000539746 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
VTN-202ENST00000539746 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.3
VTN-202ENST00000539746 ATOX1O00244 68 aa6.89□□□□□ -1.31
VTN-202ENST00000539746 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
VTN-202ENST00000539746 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
VTN-202ENST00000539746 FAM236AA0A1B0GUQ0 79 aa6.88□□□□□ -1.31
VTN-202ENST00000539746 FAM236BA0A1B0GV22 79 aa6.88□□□□□ -1.31
VTN-202ENST00000539746 SRRM2Q9UQ35 2752 aaKnown RBP6.86□□□□□ -1.31
VTN-202ENST00000539746 A8MWP4 228 aa6.85□□□□□ -1.31
VTN-202ENST00000539746 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
VTN-202ENST00000539746 LINC00472Q9H8W2 130 aa6.85□□□□□ -1.31
VTN-202ENST00000539746 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
VTN-202ENST00000539746 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
VTN-202ENST00000539746 C8orf87E5RJ46 101 aa6.83□□□□□ -1.32
VTN-202ENST00000539746 UQCRQO14949 82 aa6.83□□□□□ -1.32
VTN-202ENST00000539746 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
VTN-202ENST00000539746 FP248Q71RG6 208 aaPredicted RBP6.83□□□□□ -1.32
VTN-202ENST00000539746 SMIM20Q8N5G0 67 aa6.83□□□□□ -1.32
VTN-202ENST00000539746 KIAA1109Q2LD37 5005 aa6.82□□□□□ -1.32
VTN-202ENST00000539746 J3QL48 77 aa6.81□□□□□ -1.32
VTN-202ENST00000539746 A0A0G2JQZ4 141 aa6.8□□□□□ -1.32
VTN-202ENST00000539746 HSPG2P98160 4391 aa6.79□□□□□ -1.32
VTN-202ENST00000539746 COX7CP15954 63 aa6.79□□□□□ -1.32
VTN-202ENST00000539746 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
VTN-202ENST00000539746 A0A1B0GVX0 72 aa6.78□□□□□ -1.32
VTN-202ENST00000539746 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
VTN-202ENST00000539746 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
VTN-202ENST00000539746 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
VTN-202ENST00000539746 FAT1Q14517 4588 aa6.75□□□□□ -1.33
VTN-202ENST00000539746 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms