RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CHTF8P0CG12 524 aa10.83□□□□□ -0.68
PCDHB17P-201ENST00000539533 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
PCDHB17P-201ENST00000539533 A0A1W2PNN7 141 aa10.82□□□□□ -0.68
PCDHB17P-201ENST00000539533 MPLKIPQ8TAP9 179 aa10.82□□□□□ -0.68
PCDHB17P-201ENST00000539533 ALMS1Q8TCU4 4167 aa10.81□□□□□ -0.68
PCDHB17P-201ENST00000539533 IGKV4-1P06312 121 aa10.81□□□□□ -0.68
PCDHB17P-201ENST00000539533 KCNQ1DNQ9H478 68 aa10.81□□□□□ -0.68
PCDHB17P-201ENST00000539533 HECTD4Q9Y4D8 3996 aa10.81□□□□□ -0.68
PCDHB17P-201ENST00000539533 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
PCDHB17P-201ENST00000539533 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
PCDHB17P-201ENST00000539533 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
PCDHB17P-201ENST00000539533 PRYO14603 147 aa10.8□□□□□ -0.68
PCDHB17P-201ENST00000539533 DNAH6Q9C0G6 4158 aa10.79□□□□□ -0.68
PCDHB17P-201ENST00000539533 DNAH17Q9UFH2 4485 aa10.79□□□□□ -0.68
PCDHB17P-201ENST00000539533 A0A0U1RQV1 116 aa10.79□□□□□ -0.68
PCDHB17P-201ENST00000539533 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.68
PCDHB17P-201ENST00000539533 PANO1I0J062 215 aa10.77□□□□□ -0.69
PCDHB17P-201ENST00000539533 Q8N377 158 aa10.77□□□□□ -0.69
PCDHB17P-201ENST00000539533 OCR1Q9BZK8 76 aa10.77□□□□□ -0.69
PCDHB17P-201ENST00000539533 TNP2Q05952 138 aa10.75□□□□□ -0.69
PCDHB17P-201ENST00000539533 IGLV5-48A0A075B6I7 105 aa10.74□□□□□ -0.69
PCDHB17P-201ENST00000539533 RTL8CO15255 209 aa10.74□□□□□ -0.69
PCDHB17P-201ENST00000539533 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
PCDHB17P-201ENST00000539533 FRAS1Q86XX4 4008 aa10.73□□□□□ -0.69
PCDHB17P-201ENST00000539533 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
PCDHB17P-201ENST00000539533 KRTAP4-16G5E9R7 235 aaPredicted RBP10.72□□□□□ -0.69
PCDHB17P-201ENST00000539533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
PCDHB17P-201ENST00000539533 SPRR1AP35321 89 aa10.71□□□□□ -0.69
PCDHB17P-201ENST00000539533 PHF5AQ7RTV0 110 aaKnown RBP10.71□□□□□ -0.69
PCDHB17P-201ENST00000539533 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
PCDHB17P-201ENST00000539533 Q6ZRX8 168 aa10.69□□□□□ -0.7
PCDHB17P-201ENST00000539533 IGLV5-52A0A0A0MRZ9 124 aa10.69□□□□□ -0.7
PCDHB17P-201ENST00000539533 ETDCA0A1B0GVM5 59 aa10.68□□□□□ -0.7
PCDHB17P-201ENST00000539533 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
PCDHB17P-201ENST00000539533 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
PCDHB17P-201ENST00000539533 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
PCDHB17P-201ENST00000539533 Q9BRP9 147 aa10.68□□□□□ -0.7
PCDHB17P-201ENST00000539533 SACSQ9NZJ4 4579 aa10.67□□□□□ -0.7
PCDHB17P-201ENST00000539533 DNAH11Q96DT5 4516 aa10.67□□□□□ -0.7
PCDHB17P-201ENST00000539533 A0A1B0GW54 56 aa10.67□□□□□ -0.7
PCDHB17P-201ENST00000539533 A0A1W2PNM2 257 aa10.67□□□□□ -0.7
PCDHB17P-201ENST00000539533 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
PCDHB17P-201ENST00000539533 UBE2BP63146 152 aa10.65□□□□□ -0.71
PCDHB17P-201ENST00000539533 C1orf137Q5JT78 98 aa10.65□□□□□ -0.71
PCDHB17P-201ENST00000539533 SMIM29Q86T20 159 aa10.65□□□□□ -0.71
PCDHB17P-201ENST00000539533 ST20-AS1Q8NBB2 130 aa10.64□□□□□ -0.71
PCDHB17P-201ENST00000539533 FAT2Q9NYQ8 4349 aa10.64□□□□□ -0.71
PCDHB17P-201ENST00000539533 KRTAP10-2P60368 255 aa10.63□□□□□ -0.71
PCDHB17P-201ENST00000539533 V9GYY9 64 aa10.63□□□□□ -0.71
PCDHB17P-201ENST00000539533 DNAH5Q8TE73 4624 aa10.63□□□□□ -0.71
PCDHB17P-201ENST00000539533 Q8NBF4 154 aa10.62□□□□□ -0.71
PCDHB17P-201ENST00000539533 hDV103S1A0JD37 113 aa10.6□□□□□ -0.71
PCDHB17P-201ENST00000539533 PKD1P98161 4303 aa10.6□□□□□ -0.71
PCDHB17P-201ENST00000539533 PRLHP81277 87 aa10.59□□□□□ -0.71
PCDHB17P-201ENST00000539533 DNAH8Q96JB1 4490 aa10.59□□□□□ -0.71
PCDHB17P-201ENST00000539533 SPRR4Q96PI1 79 aa10.59□□□□□ -0.71
PCDHB17P-201ENST00000539533 LCE6AA0A183 80 aa10.57□□□□□ -0.72
PCDHB17P-201ENST00000539533 DSCR10P59022 87 aa10.55□□□□□ -0.72
PCDHB17P-201ENST00000539533 C1orf64Q8NEQ6 169 aa10.55□□□□□ -0.72
PCDHB17P-201ENST00000539533 PLAC8Q9NZF1 115 aa10.55□□□□□ -0.72
PCDHB17P-201ENST00000539533 SEC61GP60059 68 aa10.54□□□□□ -0.72
PCDHB17P-201ENST00000539533 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
PCDHB17P-201ENST00000539533 K7EQZ3 153 aa10.52□□□□□ -0.73
PCDHB17P-201ENST00000539533 Q1T7F1 81 aa10.52□□□□□ -0.73
PCDHB17P-201ENST00000539533 PRR15Q8IV56 129 aa10.51□□□□□ -0.73
PCDHB17P-201ENST00000539533 ZCCHC13Q8WW36 166 aaKnown RBP10.51□□□□□ -0.73
PCDHB17P-201ENST00000539533 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
PCDHB17P-201ENST00000539533 UBE2AP49459 152 aa10.48□□□□□ -0.73
PCDHB17P-201ENST00000539533 KMT2CQ8NEZ4 4911 aaKnown RBP10.48□□□□□ -0.73
PCDHB17P-201ENST00000539533 H0Y9J4 135 aa10.47□□□□□ -0.73
PCDHB17P-201ENST00000539533 PSPHP1O15172 72 aa10.47□□□□□ -0.73
PCDHB17P-201ENST00000539533 PRR4Q16378 134 aa10.47□□□□□ -0.73
PCDHB17P-201ENST00000539533 PSORS1C2Q9UIG4 136 aa10.46□□□□□ -0.73
PCDHB17P-201ENST00000539533 KRTAP13-1Q8IUC0 172 aa10.46□□□□□ -0.74
PCDHB17P-201ENST00000539533 CIRBP-AS1Q8TBR5 109 aa10.46□□□□□ -0.74
PCDHB17P-201ENST00000539533 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
PCDHB17P-201ENST00000539533 HCG22E2RYF7 251 aa10.45□□□□□ -0.74
PCDHB17P-201ENST00000539533 IGFL1Q6UW32 110 aa10.44□□□□□ -0.74
PCDHB17P-201ENST00000539533 TRAV22A0A0B4J277 110 aa10.44□□□□□ -0.74
PCDHB17P-201ENST00000539533 RYR2Q92736 4967 aa10.43□□□□□ -0.74
PCDHB17P-201ENST00000539533 PMAIP1Q13794 54 aa10.43□□□□□ -0.74
PCDHB17P-201ENST00000539533 Q6ZSA8 131 aa10.43□□□□□ -0.74
PCDHB17P-201ENST00000539533 CYP4F30PQ9H0H9 118 aa10.42□□□□□ -0.74
PCDHB17P-201ENST00000539533 DEFB116Q30KQ4 102 aa10.4□□□□□ -0.74
PCDHB17P-201ENST00000539533 PKHD1P08F94 4074 aa10.4□□□□□ -0.75
PCDHB17P-201ENST00000539533 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
PCDHB17P-201ENST00000539533 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
PCDHB17P-201ENST00000539533 A0A087WSZ3 146 aa10.38□□□□□ -0.75
PCDHB17P-201ENST00000539533 A8MUN3 132 aa10.36□□□□□ -0.75
PCDHB17P-201ENST00000539533 WFDC13Q8IUB5 93 aa10.36□□□□□ -0.75
PCDHB17P-201ENST00000539533 NDUFB1O75438 58 aa10.34□□□□□ -0.75
PCDHB17P-201ENST00000539533 ZNF861PO60384 105 aa10.33□□□□□ -0.76
PCDHB17P-201ENST00000539533 SPRR1BP22528 89 aa10.33□□□□□ -0.76
PCDHB17P-201ENST00000539533 A0A1B0GVY2 172 aa10.33□□□□□ -0.76
PCDHB17P-201ENST00000539533 MP68P56378 58 aa10.31□□□□□ -0.76
PCDHB17P-201ENST00000539533 RPL37AP61513 92 aaKnown RBP10.31□□□□□ -0.76
PCDHB17P-201ENST00000539533 IGLV7-43P04211 117 aa10.31□□□□□ -0.76
PCDHB17P-201ENST00000539533 DYNC1H1Q14204 4646 aaKnown RBP10.31□□□□□ -0.76
PCDHB17P-201ENST00000539533 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
PCDHB17P-201ENST00000539533 LINC00208Q96KT6 92 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms