RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 COX6CP09669 75 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 ZNF22P17026 224 aaPredicted RBP1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 UBE2D1P51668 147 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 TEN1Q86WV5 123 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 Q8N377 158 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 DAND5Q8N907 189 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 CARD19Q96LW7 228 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 CNFNQ9BYD5 112 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 TOMM7Q9P0U1 55 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 NDUFA12Q9UI09 145 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 MDN1Q9NU22 5596 aa1.7□□□□□ -2.14
CHMP4A-208ENST00000534106 TRAV13-1A0A0B4J241 112 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 A0A0B4J2C4 111 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 TMEM223A0PJW6 202 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 KRTAP4-16G5E9R7 235 aaPredicted RBP1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 CCDC179H3BU77 68 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 IFITM1P13164 125 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 C9orf116Q5BN46 136 aaPredicted RBP1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 OR13C6PQ8NH95 151 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 TIMM17AQ99595 171 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 PPDPFQ9H3Y8 114 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 LENEPQ9Y5L5 61 aa1.69□□□□□ -2.14
CHMP4A-208ENST00000534106 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV10-2A0A0K0K1G8 114 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 TEX49A0A1B0GTD5 131 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 IGIPA6NJ69 53 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 M0QY20 66 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 DNAL4O96015 105 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 LINC00158P58513 81 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 ASB16-AS1Q495Z4 193 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 C9orf153Q5TBE3 101 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 CHCHD10Q8WYQ3 142 aaPredicted RBP1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 TMEM101Q96IK0 257 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 KMT2DO14686 5537 aa1.68□□□□□ -2.14
CHMP4A-208ENST00000534106 GVQW2A0A096LPI5 108 aaPredicted RBP1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 IGHV1-58A0A0C4DH39 117 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 IGKV3D-7A0A0C4DH55 119 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV10-1A0A0K0K1A3 114 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV27A0A0K0K1C4 114 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 FAM236AA0A1B0GUQ0 79 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 FAM236BA0A1B0GV22 79 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 H3BT86 120 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 NDUFA1O15239 70 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 PFN2P35080 140 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 POLR2KP53803 58 aaKnown RBP1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 RPL32P62910 135 aaKnown RBP1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 SYCNQ0VAF6 134 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 TPRXLQ17RH7 258 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 KRTAP13-2Q52LG2 175 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 SMIM20Q8N5G0 67 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 COPS9Q8WXC6 57 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 SPANXDQ9BXN6 97 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 SPANXA1Q9NS26 97 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 SPANXCQ9NY87 97 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 LINC00474Q9P2X8 69 aa1.67□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV6-5A0A0K0K1A5 114 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 LOC107984640A0A0U1RRK4 108 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 TINCRA0A1B0GVN0 87 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 M0R2T5 61 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 NCR3O14931 201 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 XCL1P47992 114 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 HIST1H4AP62805 103 aaKnown RBP1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 HERVK_113P63121 156 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 FAM19A5Q7Z5A7 132 aaPredicted RBP1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 LINC00337Q8N6G1 96 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 TYMSOSQ8TAI1 123 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 COX7B2Q8TF08 81 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 TMEM243Q9BU79 118 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 DHRS4-AS1Q9P1J3 65 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 CDKN2A-AS1Q9UH64 79 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 UBE2D4Q9Y2X8 147 aa1.66□□□□□ -2.14
CHMP4A-208ENST00000534106 TRBV30A0A0K0K1B3 111 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 LST1O00453 97 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 COX7A2LO14548 114 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 BAALC-AS2P0C853 105 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 MRPS36P82909 103 aaKnown RBP1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 RPL18AQ02543 176 aaKnown RBP1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 KRTAP5-5Q701N2 237 aaPredicted RBP1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 C5orf38Q86SI9 138 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC00308Q8TCZ7 52 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 AMELXQ99217 191 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 TMEM126AQ9H061 195 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 SND1-IT1Q9HBX3 110 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 C14orf132Q9NPU4 83 aa1.65□□□□□ -2.15
CHMP4A-208ENST00000534106 TRAV13-2A0A0B4J235 113 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 ZNF861PO60384 105 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 TIMM17BO60830 172 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 UBE2BP63146 152 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 SS18Q15532 418 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 S100A7L2Q5SY68 101 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 MIR7-3HGQ8N6C7 128 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC00304Q8N9R0 145 aa1.64□□□□□ -2.15
CHMP4A-208ENST00000534106 LINC00959A0A1B0GUT2 108 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 A0A1B0GX51 115 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 hADV29S1A0JD25 119 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 J3KT08 172 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 M0QXV9 152 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 TRACP01848 142 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 ACYP1P07311 99 aa1.63□□□□□ -2.15
CHMP4A-208ENST00000534106 C6orf226Q5I0X4 101 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms