RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 Q96NJ1 140 aa2.39□□□□□ -2.03
SOX6-217ENST00000533870 SMR3AQ99954 134 aa2.39□□□□□ -2.03
SOX6-217ENST00000533870 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
SOX6-217ENST00000533870 WDR87Q6ZQQ6 2873 aa2.39□□□□□ -2.03
SOX6-217ENST00000533870 STAB2Q8WWQ8 2551 aa2.39□□□□□ -2.03
SOX6-217ENST00000533870 NIPBLQ6KC79 2804 aaeCLIP2.38□□□□□ -2.03
SOX6-217ENST00000533870 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
SOX6-217ENST00000533870 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
SOX6-217ENST00000533870 SETXQ7Z333 2677 aaKnown RBP2.38□□□□□ -2.03
SOX6-217ENST00000533870 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
SOX6-217ENST00000533870 HELZ2Q9BYK8 2649 aaKnown RBP2.37□□□□□ -2.03
SOX6-217ENST00000533870 NSD1Q96L73 2696 aaPredicted RBP2.37□□□□□ -2.03
SOX6-217ENST00000533870 ITPR3Q14573 2671 aa2.37□□□□□ -2.03
SOX6-217ENST00000533870 KRTAP25-1Q3LHN0 102 aa2.37□□□□□ -2.03
SOX6-217ENST00000533870 SPINT4Q6UDR6 99 aa2.37□□□□□ -2.03
SOX6-217ENST00000533870 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.37□□□□□ -2.03
SOX6-217ENST00000533870 ROMO1P60602 79 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 NOTCH1P46531 2555 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 H1FX-AS1Q4G0G2 97 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 CSAG1Q6PB30 78 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 CENPEQ02224 2701 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 Q6ZRN7 208 aaPredicted RBP2.36□□□□□ -2.03
SOX6-217ENST00000533870 KRTAP1-5Q9BYS1 174 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 USP24Q9UPU5 2620 aa2.36□□□□□ -2.03
SOX6-217ENST00000533870 A0A0A0MQY5 61 aa2.35□□□□□ -2.03
SOX6-217ENST00000533870 PANO1I0J062 215 aa2.35□□□□□ -2.03
SOX6-217ENST00000533870 MAP1AP78559 2803 aaPredicted RBP2.34□□□□□ -2.04
SOX6-217ENST00000533870 GCN1Q92616 2671 aaKnown RBP2.34□□□□□ -2.04
SOX6-217ENST00000533870 KRTAP13-3Q3SY46 172 aa2.34□□□□□ -2.04
SOX6-217ENST00000533870 COL6A5A8TX70 2615 aa2.33□□□□□ -2.04
SOX6-217ENST00000533870 CHD9Q3L8U1 2897 aa2.33□□□□□ -2.04
SOX6-217ENST00000533870 LORP23490 312 aaPredicted RBP2.32□□□□□ -2.04
SOX6-217ENST00000533870 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
SOX6-217ENST00000533870 Q8N1X5 172 aa2.32□□□□□ -2.04
SOX6-217ENST00000533870 M0QZ58 72 aa2.31□□□□□ -2.04
SOX6-217ENST00000533870 KRTAP11-1Q8IUC1 163 aa2.31□□□□□ -2.04
SOX6-217ENST00000533870 A8MUU9 505 aa2.3□□□□□ -2.04
SOX6-217ENST00000533870 UBR5O95071 2799 aaPredicted RBP2.3□□□□□ -2.04
SOX6-217ENST00000533870 C20orf166-AS1Q96NR2 134 aa2.3□□□□□ -2.04
SOX6-217ENST00000533870 CFAP46Q8IYW2 2715 aa2.3□□□□□ -2.04
SOX6-217ENST00000533870 PRRC2CQ9Y520 2896 aaKnown RBP2.3□□□□□ -2.04
SOX6-217ENST00000533870 A8MU10 97 aa2.28□□□□□ -2.04
SOX6-217ENST00000533870 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
SOX6-217ENST00000533870 IGSF10Q6WRI0 2623 aa2.27□□□□□ -2.05
SOX6-217ENST00000533870 Q6ZSA8 131 aa2.27□□□□□ -2.05
SOX6-217ENST00000533870 KRTAP16-1A8MUX0 517 aa2.27□□□□□ -2.05
SOX6-217ENST00000533870 KRTAP13-2Q52LG2 175 aa2.26□□□□□ -2.05
SOX6-217ENST00000533870 FLNCQ14315 2725 aa2.26□□□□□ -2.05
SOX6-217ENST00000533870 BAHCC1Q9P281 2608 aa2.24□□□□□ -2.05
SOX6-217ENST00000533870 CHD6Q8TD26 2715 aa2.24□□□□□ -2.05
SOX6-217ENST00000533870 CR1P17927 2039 aa2.24□□□□□ -2.05
SOX6-217ENST00000533870 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
SOX6-217ENST00000533870 S4R3F8 94 aa2.23□□□□□ -2.05
SOX6-217ENST00000533870 TRANK1O15050 2925 aa2.23□□□□□ -2.05
SOX6-217ENST00000533870 DMBT1Q9UGM3 2413 aaPredicted RBP2.23□□□□□ -2.05
SOX6-217ENST00000533870 HIVEP1P15822 2718 aa2.22□□□□□ -2.05
SOX6-217ENST00000533870 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.05
SOX6-217ENST00000533870 KMT2BQ9UMN6 2715 aaPredicted RBP2.21□□□□□ -2.05
SOX6-217ENST00000533870 ITPR1Q14643 2758 aa2.21□□□□□ -2.06
SOX6-217ENST00000533870 CENPFP49454 3210 aa2.2□□□□□ -2.06
SOX6-217ENST00000533870 CAMK2N1Q7Z7J9 78 aa2.2□□□□□ -2.06
SOX6-217ENST00000533870 SEC61BP60468 96 aaKnown RBP2.2□□□□□ -2.06
SOX6-217ENST00000533870 R4GN34 69 aa2.2□□□□□ -2.06
SOX6-217ENST00000533870 KRTAP10-1P60331 282 aa2.2□□□□□ -2.06
SOX6-217ENST00000533870 A0A0D9SG42 100 aa2.19□□□□□ -2.06
SOX6-217ENST00000533870 TENM3Q9P273 2699 aa2.19□□□□□ -2.06
SOX6-217ENST00000533870 C9orf92A6NGG3 77 aa2.18□□□□□ -2.06
SOX6-217ENST00000533870 H0YAA0 97 aa2.18□□□□□ -2.06
SOX6-217ENST00000533870 P0C880 135 aa2.18□□□□□ -2.06
SOX6-217ENST00000533870 NBEAL2Q6ZNJ1 2754 aa2.18□□□□□ -2.06
SOX6-217ENST00000533870 AKAP13Q12802 2813 aa2.17□□□□□ -2.06
SOX6-217ENST00000533870 KRTAP21-3Q3LHN1 58 aa2.17□□□□□ -2.06
SOX6-217ENST00000533870 UTP20O75691 2785 aaKnown RBP2.16□□□□□ -2.06
SOX6-217ENST00000533870 NDUFAF8A1L188 74 aa2.15□□□□□ -2.06
SOX6-217ENST00000533870 KRTAP10-2P60368 255 aa2.15□□□□□ -2.06
SOX6-217ENST00000533870 CHD7Q9P2D1 2997 aa2.15□□□□□ -2.07
SOX6-217ENST00000533870 EP400Q96L91 3159 aa2.14□□□□□ -2.07
SOX6-217ENST00000533870 TEX15Q9BXT5 2789 aa2.14□□□□□ -2.07
SOX6-217ENST00000533870 TNP1P09430 55 aa2.12□□□□□ -2.07
SOX6-217ENST00000533870 RYR1P21817 5038 aa2.12□□□□□ -2.07
SOX6-217ENST00000533870 PLAC4Q8WY50 150 aa2.12□□□□□ -2.07
SOX6-217ENST00000533870 TENM4Q6N022 2769 aa2.1□□□□□ -2.07
SOX6-217ENST00000533870 SMR3BP02814 79 aaPredicted RBP2.09□□□□□ -2.07
SOX6-217ENST00000533870 XP32Q5T750 250 aa2.09□□□□□ -2.08
SOX6-217ENST00000533870 BPTFQ12830 3046 aa2.08□□□□□ -2.08
SOX6-217ENST00000533870 ITPR2Q14571 2701 aa2.08□□□□□ -2.08
SOX6-217ENST00000533870 TPRXLQ17RH7 258 aa2.08□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP23-1A1A580 65 aa2.08□□□□□ -2.08
SOX6-217ENST00000533870 FLG2Q5D862 2391 aaPredicted RBP2.07□□□□□ -2.08
SOX6-217ENST00000533870 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
SOX6-217ENST00000533870 APCP25054 2843 aa2.06□□□□□ -2.08
SOX6-217ENST00000533870 DSPP15924 2871 aaKnown RBP2.06□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP3-1Q9BYR8 98 aa2.06□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP10-6P60371 365 aaPredicted RBP2.06□□□□□ -2.08
SOX6-217ENST00000533870 Q5VSD8 79 aa2.05□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
SOX6-217ENST00000533870 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
SOX6-217ENST00000533870 TENM1Q9UKZ4 2725 aa2.02□□□□□ -2.09
SOX6-217ENST00000533870 ZANQ9Y493 2812 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms