RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 IGLV7-43P04211 117 aa4.42□□□□□ -1.7
TGFBR3-210ENST00000533089 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
TGFBR3-210ENST00000533089 ATRQ13535 2644 aa4.42□□□□□ -1.7
TGFBR3-210ENST00000533089 CHD6Q8TD26 2715 aa4.42□□□□□ -1.7
TGFBR3-210ENST00000533089 Q6ZSA8 131 aa4.41□□□□□ -1.7
TGFBR3-210ENST00000533089 LINC00483Q53H64 154 aa4.41□□□□□ -1.7
TGFBR3-210ENST00000533089 PCNTO95613 3336 aa4.41□□□□□ -1.7
TGFBR3-210ENST00000533089 PRRC2CQ9Y520 2896 aaKnown RBP4.4□□□□□ -1.7
TGFBR3-210ENST00000533089 AKAP13Q12802 2813 aa4.4□□□□□ -1.71
TGFBR3-210ENST00000533089 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.71
TGFBR3-210ENST00000533089 CNBPP62633 177 aaKnown RBP4.4□□□□□ -1.71
TGFBR3-210ENST00000533089 CASC10Q5T4H9 136 aa4.39□□□□□ -1.71
TGFBR3-210ENST00000533089 LAMA3Q16787 3333 aa4.39□□□□□ -1.71
TGFBR3-210ENST00000533089 LINC00612Q8N6U2 182 aa4.39□□□□□ -1.71
TGFBR3-210ENST00000533089 GIG44P09565 113 aaPredicted RBP4.38□□□□□ -1.71
TGFBR3-210ENST00000533089 PRR34Q9NV39 138 aa4.38□□□□□ -1.71
TGFBR3-210ENST00000533089 MAST4O15021 2626 aa4.38□□□□□ -1.71
TGFBR3-210ENST00000533089 CENPEQ02224 2701 aa4.37□□□□□ -1.71
TGFBR3-210ENST00000533089 Q6ZR54 194 aa4.37□□□□□ -1.71
TGFBR3-210ENST00000533089 MGAM2Q2M2H8 2515 aa4.37□□□□□ -1.71
TGFBR3-210ENST00000533089 SPRR4Q96PI1 79 aa4.36□□□□□ -1.71
TGFBR3-210ENST00000533089 C5orf42Q9H799 3197 aa4.35□□□□□ -1.71
TGFBR3-210ENST00000533089 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
TGFBR3-210ENST00000533089 TNP2Q05952 138 aa4.35□□□□□ -1.71
TGFBR3-210ENST00000533089 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
TGFBR3-210ENST00000533089 BRCA2P51587 3418 aa4.33□□□□□ -1.72
TGFBR3-210ENST00000533089 STAB1Q9NY15 2570 aa4.33□□□□□ -1.72
TGFBR3-210ENST00000533089 DSPP15924 2871 aaKnown RBP4.33□□□□□ -1.72
TGFBR3-210ENST00000533089 MMP24-AS1A0A0U1RRL7 71 aa4.32□□□□□ -1.72
TGFBR3-210ENST00000533089 KRTAP21-3Q3LHN1 58 aa4.32□□□□□ -1.72
TGFBR3-210ENST00000533089 MKI67P46013 3256 aaKnown RBP4.32□□□□□ -1.72
TGFBR3-210ENST00000533089 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
TGFBR3-210ENST00000533089 TEP1Q99973 2627 aaKnown RBP4.3□□□□□ -1.72
TGFBR3-210ENST00000533089 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
TGFBR3-210ENST00000533089 GCN1Q92616 2671 aaKnown RBP4.3□□□□□ -1.72
TGFBR3-210ENST00000533089 CR1P17927 2039 aa4.29□□□□□ -1.72
TGFBR3-210ENST00000533089 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
TGFBR3-210ENST00000533089 A8MUU9 505 aa4.28□□□□□ -1.72
TGFBR3-210ENST00000533089 MGAQ8IWI9 3026 aa4.27□□□□□ -1.73
TGFBR3-210ENST00000533089 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
TGFBR3-210ENST00000533089 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.27□□□□□ -1.73
TGFBR3-210ENST00000533089 COL6A5A8TX70 2615 aa4.26□□□□□ -1.73
TGFBR3-210ENST00000533089 S4R3F8 94 aa4.26□□□□□ -1.73
TGFBR3-210ENST00000533089 FLNCQ14315 2725 aa4.25□□□□□ -1.73
TGFBR3-210ENST00000533089 Q8NDZ9 215 aa4.24□□□□□ -1.73
TGFBR3-210ENST00000533089 SETXQ7Z333 2677 aaKnown RBP4.24□□□□□ -1.73
TGFBR3-210ENST00000533089 Q5W150 140 aa4.23□□□□□ -1.73
TGFBR3-210ENST00000533089 A0A087X002 238 aa4.23□□□□□ -1.73
TGFBR3-210ENST00000533089 BPTFQ12830 3046 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 LCE6AA0A183 80 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 PRUNE2Q8WUY3 3088 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 R4GN34 69 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 A0A0C4DFX4 3053 aa4.19□□□□□ -1.74
TGFBR3-210ENST00000533089 UBR5O95071 2799 aaPredicted RBP4.18□□□□□ -1.74
TGFBR3-210ENST00000533089 CDH23Q9H251 3354 aa4.18□□□□□ -1.74
TGFBR3-210ENST00000533089 FLG2Q5D862 2391 aaPredicted RBP4.17□□□□□ -1.74
TGFBR3-210ENST00000533089 PLAC8Q9NZF1 115 aa4.17□□□□□ -1.74
TGFBR3-210ENST00000533089 KRTAP29-1A8MX34 341 aaPredicted RBP4.16□□□□□ -1.74
TGFBR3-210ENST00000533089 UNC80Q8N2C7 3258 aa4.16□□□□□ -1.74
TGFBR3-210ENST00000533089 PANO1I0J062 215 aa4.16□□□□□ -1.74
TGFBR3-210ENST00000533089 WDFY4Q6ZS81 3184 aa4.15□□□□□ -1.74
TGFBR3-210ENST00000533089 M0QZ58 72 aa4.15□□□□□ -1.75
TGFBR3-210ENST00000533089 SZT2Q5T011 3432 aa4.14□□□□□ -1.75
TGFBR3-210ENST00000533089 TRIOO75962 3097 aa4.14□□□□□ -1.75
TGFBR3-210ENST00000533089 ITPR1Q14643 2758 aa4.14□□□□□ -1.75
TGFBR3-210ENST00000533089 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
TGFBR3-210ENST00000533089 TEX15Q9BXT5 2789 aa4.13□□□□□ -1.75
TGFBR3-210ENST00000533089 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
TGFBR3-210ENST00000533089 KRTAP11-1Q8IUC1 163 aa4.13□□□□□ -1.75
TGFBR3-210ENST00000533089 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
TGFBR3-210ENST00000533089 NOTCH1P46531 2555 aa4.12□□□□□ -1.75
TGFBR3-210ENST00000533089 KMT2BQ9UMN6 2715 aaPredicted RBP4.1□□□□□ -1.75
TGFBR3-210ENST00000533089 NSD1Q96L73 2696 aaPredicted RBP4.1□□□□□ -1.75
TGFBR3-210ENST00000533089 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
TGFBR3-210ENST00000533089 ITPR2Q14571 2701 aa4.1□□□□□ -1.75
TGFBR3-210ENST00000533089 KRTAP10-2P60368 255 aa4.09□□□□□ -1.76
TGFBR3-210ENST00000533089 SPRR1AP35321 89 aa4.07□□□□□ -1.76
TGFBR3-210ENST00000533089 SPTBN5Q9NRC6 3674 aaKnown RBP4.07□□□□□ -1.76
TGFBR3-210ENST00000533089 KRTAP1-5Q9BYS1 174 aa4.07□□□□□ -1.76
TGFBR3-210ENST00000533089 APCP25054 2843 aa4.07□□□□□ -1.76
TGFBR3-210ENST00000533089 NBEAL1Q6ZS30 2694 aa4.06□□□□□ -1.76
TGFBR3-210ENST00000533089 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
TGFBR3-210ENST00000533089 EYSQ5T1H1 3165 aa4.05□□□□□ -1.76
TGFBR3-210ENST00000533089 LAMA2P24043 3122 aaKnown RBP4.05□□□□□ -1.76
TGFBR3-210ENST00000533089 XIRP2A4UGR9 3374 aa4.05□□□□□ -1.76
TGFBR3-210ENST00000533089 FRYQ5TBA9 3013 aa4.04□□□□□ -1.76
TGFBR3-210ENST00000533089 NOTCH2NLQ7Z3S9 236 aa4.03□□□□□ -1.76
TGFBR3-210ENST00000533089 ATMQ13315 3056 aa4.03□□□□□ -1.76
TGFBR3-210ENST00000533089 COL6A3P12111 3177 aa4.03□□□□□ -1.76
TGFBR3-210ENST00000533089 CFAP54Q96N23 3096 aa4.02□□□□□ -1.77
TGFBR3-210ENST00000533089 FRYLO94915 3013 aa4.01□□□□□ -1.77
TGFBR3-210ENST00000533089 KALRNO60229 2985 aa4.01□□□□□ -1.77
TGFBR3-210ENST00000533089 DMXL2Q8TDJ6 3036 aa4.01□□□□□ -1.77
TGFBR3-210ENST00000533089 SPRR1BP22528 89 aa4.01□□□□□ -1.77
TGFBR3-210ENST00000533089 UTP20O75691 2785 aaKnown RBP4□□□□□ -1.77
TGFBR3-210ENST00000533089 MAP1AP78559 2803 aaPredicted RBP4□□□□□ -1.77
TGFBR3-210ENST00000533089 COL12A1Q99715 3063 aa4□□□□□ -1.77
TGFBR3-210ENST00000533089 A0A1B0GVY2 172 aa3.98□□□□□ -1.77
TGFBR3-210ENST00000533089 TENM4Q6N022 2769 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms