RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 M0R2T5 61 aa7.02□□□□□ -1.29
PTPRK-221ENST00000532331 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
PTPRK-221ENST00000532331 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
PTPRK-221ENST00000532331 KRTAP10-2P60368 255 aa7.01□□□□□ -1.29
PTPRK-221ENST00000532331 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
PTPRK-221ENST00000532331 Q8N1X5 172 aa6.99□□□□□ -1.29
PTPRK-221ENST00000532331 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
PTPRK-221ENST00000532331 Q6ZR54 194 aa6.95□□□□□ -1.3
PTPRK-221ENST00000532331 OCR1Q9BZK8 76 aa6.93□□□□□ -1.3
PTPRK-221ENST00000532331 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
PTPRK-221ENST00000532331 SPRR1AP35321 89 aa6.91□□□□□ -1.3
PTPRK-221ENST00000532331 LINC01554Q52M75 96 aa6.91□□□□□ -1.3
PTPRK-221ENST00000532331 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
PTPRK-221ENST00000532331 UNC80Q8N2C7 3258 aa6.89□□□□□ -1.31
PTPRK-221ENST00000532331 CFAP54Q96N23 3096 aa6.89□□□□□ -1.31
PTPRK-221ENST00000532331 A0A0D9SG42 100 aa6.89□□□□□ -1.31
PTPRK-221ENST00000532331 Q8NDZ9 215 aa6.88□□□□□ -1.31
PTPRK-221ENST00000532331 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
PTPRK-221ENST00000532331 CDH23Q9H251 3354 aa6.88□□□□□ -1.31
PTPRK-221ENST00000532331 ITPR2Q14571 2701 aa6.88□□□□□ -1.31
PTPRK-221ENST00000532331 TRIOO75962 3097 aa6.88□□□□□ -1.31
PTPRK-221ENST00000532331 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
PTPRK-221ENST00000532331 OXTP01178 125 aa6.87□□□□□ -1.31
PTPRK-221ENST00000532331 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
PTPRK-221ENST00000532331 SPRR1BP22528 89 aa6.85□□□□□ -1.31
PTPRK-221ENST00000532331 HRES1P13985 223 aa6.84□□□□□ -1.31
PTPRK-221ENST00000532331 MMP24-AS1A0A0U1RRL7 71 aa6.84□□□□□ -1.31
PTPRK-221ENST00000532331 TNRC18O15417 2968 aaPredicted RBP6.84□□□□□ -1.31
PTPRK-221ENST00000532331 LAMA2P24043 3122 aaKnown RBP6.83□□□□□ -1.32
PTPRK-221ENST00000532331 UBR5O95071 2799 aaPredicted RBP6.83□□□□□ -1.32
PTPRK-221ENST00000532331 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
PTPRK-221ENST00000532331 NBEAL1Q6ZS30 2694 aa6.81□□□□□ -1.32
PTPRK-221ENST00000532331 Q1T7F1 81 aa6.78□□□□□ -1.32
PTPRK-221ENST00000532331 SZT2Q5T011 3432 aa6.78□□□□□ -1.32
PTPRK-221ENST00000532331 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
PTPRK-221ENST00000532331 MAP1AP78559 2803 aaPredicted RBP6.78□□□□□ -1.32
PTPRK-221ENST00000532331 FLNCQ14315 2725 aa6.77□□□□□ -1.32
PTPRK-221ENST00000532331 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
PTPRK-221ENST00000532331 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
PTPRK-221ENST00000532331 A0A1B0GU33 70 aa6.77□□□□□ -1.33
PTPRK-221ENST00000532331 PANO1I0J062 215 aa6.76□□□□□ -1.33
PTPRK-221ENST00000532331 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
PTPRK-221ENST00000532331 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
PTPRK-221ENST00000532331 ITPR1Q14643 2758 aa6.75□□□□□ -1.33
PTPRK-221ENST00000532331 VPS13AQ96RL7 3174 aa6.75□□□□□ -1.33
PTPRK-221ENST00000532331 NSD1Q96L73 2696 aaPredicted RBP6.74□□□□□ -1.33
PTPRK-221ENST00000532331 CSAG1Q6PB30 78 aa6.74□□□□□ -1.33
PTPRK-221ENST00000532331 FRYQ5TBA9 3013 aa6.74□□□□□ -1.33
PTPRK-221ENST00000532331 LCA10Q71F78 164 aa6.74□□□□□ -1.33
PTPRK-221ENST00000532331 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
PTPRK-221ENST00000532331 Q5W150 140 aa6.73□□□□□ -1.33
PTPRK-221ENST00000532331 S4R3F8 94 aa6.72□□□□□ -1.33
PTPRK-221ENST00000532331 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
PTPRK-221ENST00000532331 KMT2BQ9UMN6 2715 aaPredicted RBP6.71□□□□□ -1.33
PTPRK-221ENST00000532331 FRYLO94915 3013 aa6.71□□□□□ -1.34
PTPRK-221ENST00000532331 COL6A3P12111 3177 aa6.71□□□□□ -1.34
PTPRK-221ENST00000532331 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
PTPRK-221ENST00000532331 SPINK7P58062 85 aa6.7□□□□□ -1.34
PTPRK-221ENST00000532331 Q75L30 129 aa6.69□□□□□ -1.34
PTPRK-221ENST00000532331 ATMQ13315 3056 aa6.69□□□□□ -1.34
PTPRK-221ENST00000532331 LINC01558Q9Y6Z2 57 aa6.68□□□□□ -1.34
PTPRK-221ENST00000532331 COL12A1Q99715 3063 aa6.68□□□□□ -1.34
PTPRK-221ENST00000532331 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
PTPRK-221ENST00000532331 STAB2Q8WWQ8 2551 aa6.66□□□□□ -1.34
PTPRK-221ENST00000532331 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.34
PTPRK-221ENST00000532331 DMXL2Q8TDJ6 3036 aa6.65□□□□□ -1.34
PTPRK-221ENST00000532331 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
PTPRK-221ENST00000532331 A0A087X002 238 aa6.64□□□□□ -1.35
PTPRK-221ENST00000532331 REV3LO60673 3130 aa6.64□□□□□ -1.35
PTPRK-221ENST00000532331 KRTAP4-16G5E9R7 235 aaPredicted RBP6.63□□□□□ -1.35
PTPRK-221ENST00000532331 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
PTPRK-221ENST00000532331 TACC2O95359 2948 aa6.63□□□□□ -1.35
PTPRK-221ENST00000532331 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
PTPRK-221ENST00000532331 APCP25054 2843 aa6.61□□□□□ -1.35
PTPRK-221ENST00000532331 LUZP6Q538Z0 58 aa6.6□□□□□ -1.35
PTPRK-221ENST00000532331 R4GN34 69 aa6.59□□□□□ -1.35
PTPRK-221ENST00000532331 CYSTM1Q9H1C7 97 aa6.58□□□□□ -1.36
PTPRK-221ENST00000532331 LAMA1P25391 3075 aa6.57□□□□□ -1.36
PTPRK-221ENST00000532331 CELSR3Q9NYQ7 3312 aa6.56□□□□□ -1.36
PTPRK-221ENST00000532331 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
PTPRK-221ENST00000532331 CRYBG3Q68DQ2 2970 aa6.54□□□□□ -1.36
PTPRK-221ENST00000532331 Q5XG85 94 aa6.53□□□□□ -1.36
PTPRK-221ENST00000532331 Q5VV11 94 aa6.53□□□□□ -1.36
PTPRK-221ENST00000532331 NBEAQ8NFP9 2946 aa6.52□□□□□ -1.37
PTPRK-221ENST00000532331 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
PTPRK-221ENST00000532331 BOD1L1Q8NFC6 3051 aa6.52□□□□□ -1.37
PTPRK-221ENST00000532331 VCANP13611 3396 aa6.51□□□□□ -1.37
PTPRK-221ENST00000532331 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-221ENST00000532331 LRBAP50851 2863 aa6.5□□□□□ -1.37
PTPRK-221ENST00000532331 DMXL1Q9Y485 3027 aa6.47□□□□□ -1.37
PTPRK-221ENST00000532331 RPL37P61927 97 aaKnown RBP6.47□□□□□ -1.37
PTPRK-221ENST00000532331 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-221ENST00000532331 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
PTPRK-221ENST00000532331 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
PTPRK-221ENST00000532331 M0QZ58 72 aa6.46□□□□□ -1.38
PTPRK-221ENST00000532331 ADGRG4Q8IZF6 3080 aa6.45□□□□□ -1.38
PTPRK-221ENST00000532331 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
PTPRK-221ENST00000532331 SPTBN5Q9NRC6 3674 aaKnown RBP6.45□□□□□ -1.38
PTPRK-221ENST00000532331 KRTAP13-2Q52LG2 175 aa6.44□□□□□ -1.38
PTPRK-221ENST00000532331 KALRNO60229 2985 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms