RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	PPDPFL	Q8WWR9	84 aa		12.53	□□□□□ -0.4
PABPC4-225	ENST00000531243	C9orf153	Q5TBE3	101 aa		12.52	□□□□□ -0.41
PABPC4-225	ENST00000531243	SSBP3-AS1	Q7Z2R9	100 aa		12.52	□□□□□ -0.41
PABPC4-225	ENST00000531243	DNAL4	O96015	105 aa		12.51	□□□□□ -0.41
PABPC4-225	ENST00000531243	LINC01547	P58512	204 aa	Predicted RBP	12.5	□□□□□ -0.41
PABPC4-225	ENST00000531243	FAM218A	Q96MZ4	157 aa		12.5	□□□□□ -0.41
PABPC4-225	ENST00000531243	MOBP	Q13875	183 aa		12.49	□□□□□ -0.41
PABPC4-225	ENST00000531243	LINC00304	Q8N9R0	145 aa		12.49	□□□□□ -0.41
PABPC4-225	ENST00000531243		Q8NBF4	154 aa		12.49	□□□□□ -0.41
PABPC4-225	ENST00000531243	CLEC2B	Q92478	149 aa		12.49	□□□□□ -0.41
PABPC4-225	ENST00000531243	LYRM7	Q5U5X0	104 aa		12.48	□□□□□ -0.41
PABPC4-225	ENST00000531243		Q8N377	158 aa		12.48	□□□□□ -0.41
PABPC4-225	ENST00000531243		F8WEM9	126 aa		12.47	□□□□□ -0.41
PABPC4-225	ENST00000531243	LOR	P23490	312 aa	Predicted RBP	12.47	□□□□□ -0.41
PABPC4-225	ENST00000531243	SPAG11A	Q6PDA7	123 aa		12.47	□□□□□ -0.41
PABPC4-225	ENST00000531243		H3BQ85	93 aa		12.46	□□□□□ -0.41
PABPC4-225	ENST00000531243	SNHG12	Q9BXW3	62 aa		12.45	□□□□□ -0.42
PABPC4-225	ENST00000531243	SMIM29	Q86T20	159 aa		12.43	□□□□□ -0.42
PABPC4-225	ENST00000531243	PCP4L1	A6NKN8	68 aa		12.42	□□□□□ -0.42
PABPC4-225	ENST00000531243	TRAC	P01848	142 aa		12.42	□□□□□ -0.42
PABPC4-225	ENST00000531243	TNXB	P22105	4242 aa		12.42	□□□□□ -0.42
PABPC4-225	ENST00000531243	LST1	O00453	97 aa		12.41	□□□□□ -0.42
PABPC4-225	ENST00000531243	ORMDL1	Q9P0S3	153 aa		12.41	□□□□□ -0.42
PABPC4-225	ENST00000531243	ATXN8	Q156A1	80 aa		12.39	□□□□□ -0.43
PABPC4-225	ENST00000531243	NAA38	Q9BRA0	125 aa	Known RBP	12.39	□□□□□ -0.43
PABPC4-225	ENST00000531243	C9orf118	A6NHY6	69 aa		12.38	□□□□□ -0.43
PABPC4-225	ENST00000531243		H3BUT2	72 aa		12.38	□□□□□ -0.43
PABPC4-225	ENST00000531243	SPINK1	P00995	79 aa		12.37	□□□□□ -0.43
PABPC4-225	ENST00000531243	FABP2	P12104	132 aa		12.37	□□□□□ -0.43
PABPC4-225	ENST00000531243	COL5A1-AS1	Q5SY13	56 aa		12.37	□□□□□ -0.43
PABPC4-225	ENST00000531243	TRBV20-1	A0A075B6N2	111 aa		12.36	□□□□□ -0.43
PABPC4-225	ENST00000531243	TMEM256-PLSCR3	K7ERE1	68 aa		12.36	□□□□□ -0.43
PABPC4-225	ENST00000531243	TAX1BP3	O14907	124 aa		12.35	□□□□□ -0.43
PABPC4-225	ENST00000531243		Q6JHZ5	121 aa		12.34	□□□□□ -0.43
PABPC4-225	ENST00000531243	TCL1B	O95988	128 aa		12.33	□□□□□ -0.44
PABPC4-225	ENST00000531243	NDUFV3	P56181	108 aa	Known RBP	12.33	□□□□□ -0.44
PABPC4-225	ENST00000531243	RPS29	P62273	56 aa	Known RBP	12.32	□□□□□ -0.44
PABPC4-225	ENST00000531243	IGLV8-61	A0A075B6I0	122 aa		12.31	□□□□□ -0.44
PABPC4-225	ENST00000531243		A0A1W2PPM0	123 aa		12.3	□□□□□ -0.44
PABPC4-225	ENST00000531243	CD164	Q04900	197 aa		12.3	□□□□□ -0.44
PABPC4-225	ENST00000531243	UBE2V1	Q13404	147 aa		12.27	□□□□□ -0.45
PABPC4-225	ENST00000531243		H3BMG7	143 aa		12.26	□□□□□ -0.45
PABPC4-225	ENST00000531243	LIMD2	Q9BT23	127 aa		12.26	□□□□□ -0.45
PABPC4-225	ENST00000531243	BAALC-AS2	P0C853	105 aa		12.25	□□□□□ -0.45
PABPC4-225	ENST00000531243	HRCT1	Q6UXD1	115 aa		12.25	□□□□□ -0.45
PABPC4-225	ENST00000531243	IGFL1	Q6UW32	110 aa		12.23	□□□□□ -0.45
PABPC4-225	ENST00000531243	ANKRD29	Q8N6D5	301 aa		12.2	□□□□□ -0.46
PABPC4-225	ENST00000531243	SPCS1	Q9Y6A9	102 aa		12.19	□□□□□ -0.46
PABPC4-225	ENST00000531243	PRR4	Q16378	134 aa		12.18	□□□□□ -0.46
PABPC4-225	ENST00000531243		A0A0G2JQZ4	141 aa		12.17	□□□□□ -0.46
PABPC4-225	ENST00000531243		C9JAW5	83 aa		12.17	□□□□□ -0.46
PABPC4-225	ENST00000531243	RBM3	P98179	157 aa	Known RBP	12.15	□□□□□ -0.46
PABPC4-225	ENST00000531243	JMJD7-PLA2G4B	H0Y9G9	81 aa		12.14	□□□□□ -0.47
PABPC4-225	ENST00000531243		Q5XG85	94 aa		12.14	□□□□□ -0.47
PABPC4-225	ENST00000531243	TEN1	Q86WV5	123 aa		12.14	□□□□□ -0.47
PABPC4-225	ENST00000531243	RETNLB	Q9BQ08	111 aa		12.14	□□□□□ -0.47
PABPC4-225	ENST00000531243	HERC1	Q15751	4861 aa		12.13	□□□□□ -0.47
PABPC4-225	ENST00000531243		Q6Q795	121 aa		12.13	□□□□□ -0.47
PABPC4-225	ENST00000531243	FP248	Q71RG6	208 aa	Predicted RBP	12.13	□□□□□ -0.47
PABPC4-225	ENST00000531243	DSCR8	Q96T75	97 aa		12.13	□□□□□ -0.47
PABPC4-225	ENST00000531243	TRBV7-7	A0A0K0K1E9	115 aa		12.12	□□□□□ -0.47
PABPC4-225	ENST00000531243		A0A1B0GV72	72 aa		12.12	□□□□□ -0.47
PABPC4-225	ENST00000531243		H3BT86	120 aa		12.12	□□□□□ -0.47
PABPC4-225	ENST00000531243	GTF2H5	Q6ZYL4	71 aa		12.08	□□□□□ -0.48
PABPC4-225	ENST00000531243	SS18L2	Q9UHA2	77 aa		12.08	□□□□□ -0.48
PABPC4-225	ENST00000531243		K7EP34	96 aa		12.07	□□□□□ -0.48
PABPC4-225	ENST00000531243	IGLV7-46	A0A075B6I9	117 aa		12.05	□□□□□ -0.48
PABPC4-225	ENST00000531243	TRBV7-4	A0A0J9YYF1	115 aa		12.05	□□□□□ -0.48
PABPC4-225	ENST00000531243	CCK	P06307	115 aa		12.04	□□□□□ -0.48
PABPC4-225	ENST00000531243	PDE6G	P18545	87 aa		12.04	□□□□□ -0.48
PABPC4-225	ENST00000531243	C21orf62-AS1	Q17RA5	79 aa		12.03	□□□□□ -0.48
PABPC4-225	ENST00000531243	ASB16-AS1	Q495Z4	193 aa		12.02	□□□□□ -0.49
PABPC4-225	ENST00000531243		A0A1W2PNM2	257 aa		12.01	□□□□□ -0.49
PABPC4-225	ENST00000531243	MTURN	Q8N3F0	131 aa		12.01	□□□□□ -0.49
PABPC4-225	ENST00000531243		A0A087WSZ3	146 aa		12	□□□□□ -0.49
PABPC4-225	ENST00000531243	VPS25	Q9BRG1	176 aa		12	□□□□□ -0.49
PABPC4-225	ENST00000531243	LOC110117498	A0A087WWA1	95 aa		11.97	□□□□□ -0.49
PABPC4-225	ENST00000531243	C1orf195	Q5TG92	126 aa		11.97	□□□□□ -0.49
PABPC4-225	ENST00000531243	TPRXL	Q17RH7	258 aa		11.96	□□□□□ -0.49
PABPC4-225	ENST00000531243	OBSCN-AS1	Q96MR7	158 aa		11.96	□□□□□ -0.49
PABPC4-225	ENST00000531243	C14orf132	Q9NPU4	83 aa		11.95	□□□□□ -0.5
PABPC4-225	ENST00000531243		A0A1B0GW54	56 aa		11.94	□□□□□ -0.5
PABPC4-225	ENST00000531243		Q6ZQT0	140 aa		11.93	□□□□□ -0.5
PABPC4-225	ENST00000531243		F8W1H4	67 aa		11.91	□□□□□ -0.5
PABPC4-225	ENST00000531243	CDIP1	Q9H305	208 aa		11.9	□□□□□ -0.5
PABPC4-225	ENST00000531243	PRO0461	Q9UI25	63 aa		11.9	□□□□□ -0.5
PABPC4-225	ENST00000531243	HMCN2	Q8NDA2	5059 aa		11.89	□□□□□ -0.51
PABPC4-225	ENST00000531243	KRTAP13-3	Q3SY46	172 aa		11.86	□□□□□ -0.51
PABPC4-225	ENST00000531243		Q96NJ1	140 aa		11.79	□□□□□ -0.52
PABPC4-225	ENST00000531243	SIGMAR1	Q99720	223 aa		11.77	□□□□□ -0.53
PABPC4-225	ENST00000531243	IGKV4-1	P06312	121 aa		11.76	□□□□□ -0.53
PABPC4-225	ENST00000531243	LINC00472	Q9H8W2	130 aa		11.76	□□□□□ -0.53
PABPC4-225	ENST00000531243	C9orf92	A6NGG3	77 aa		11.75	□□□□□ -0.53
PABPC4-225	ENST00000531243		A0A1B0GV90	55 aa		11.74	□□□□□ -0.53
PABPC4-225	ENST00000531243		J3KT08	172 aa		11.74	□□□□□ -0.53
PABPC4-225	ENST00000531243	NREP	Q16612	68 aa		11.74	□□□□□ -0.53
PABPC4-225	ENST00000531243	LOC100996750	A0A140TA64	210 aa		11.73	□□□□□ -0.53
PABPC4-225	ENST00000531243	ETDB	Q3ZM63	59 aa		11.73	□□□□□ -0.53
PABPC4-225	ENST00000531243	KRTAP4-6	Q9BYQ5	205 aa		11.73	□□□□□ -0.53
PABPC4-225	ENST00000531243	LPA	P08519	4548 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms