RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MAP1AP78559 2803 aaPredicted RBP0.47□□□□□ -2.33
CAPRIN1-208ENST00000530008 DEFB131BA0A096LNP1 70 aa0.47□□□□□ -2.33
CAPRIN1-208ENST00000530008 CCL22O00626 93 aa0.47□□□□□ -2.33
CAPRIN1-208ENST00000530008 AGLP35573 1532 aa0.47□□□□□ -2.33
CAPRIN1-208ENST00000530008 LRP1Q07954 4544 aaKnown RBP0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 CHD6Q8TD26 2715 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 NRXN3Q9Y4C0 1643 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 DSTQ03001 7570 aaKnown RBP0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 AKAP6Q13023 2319 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 CSPG4Q6UVK1 2322 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 SPINK4O60575 86 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 LINC00158P58513 81 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 NCBP2-AS2Q69YL0 99 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 DOPEY1Q5JWR5 2465 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 ABCA5Q8WWZ7 1642 aa0.46□□□□□ -2.34
CAPRIN1-208ENST00000530008 UBR4Q5T4S7 5183 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 CHD9Q3L8U1 2897 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 CDC42BPAQ5VT25 1732 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 SPTBN4Q9H254 2564 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 IGIPA6NJ69 53 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 DEFB114Q30KQ6 69 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 COX6B2Q6YFQ2 88 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 ANKHD1Q8IWZ3 2542 aaKnown RBP0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 ANKRD11Q6UB99 2663 aaPredicted RBP0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 EPG5Q9HCE0 2579 aa0.45□□□□□ -2.34
CAPRIN1-208ENST00000530008 TEP1Q99973 2627 aaKnown RBP0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 DEPDC5O75140 1603 aa0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 SRRM2Q9UQ35 2752 aaKnown RBP0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 SETD2Q9BYW2 2564 aaPredicted RBP0.44□□□□□ -2.34
CAPRIN1-208ENST00000530008 SETXQ7Z333 2677 aaKnown RBP0.43□□□□□ -2.34
CAPRIN1-208ENST00000530008 VWFP04275 2813 aa0.43□□□□□ -2.34
CAPRIN1-208ENST00000530008 PDE4DIPQ5VU43 2346 aa0.43□□□□□ -2.34
CAPRIN1-208ENST00000530008 EFCAB6Q5THR3 1501 aa0.43□□□□□ -2.34
CAPRIN1-208ENST00000530008 FLNCQ14315 2725 aa0.43□□□□□ -2.34
CAPRIN1-208ENST00000530008 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 ADCY10Q96PN6 1610 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 UBR5O95071 2799 aaPredicted RBP0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 DDX60Q8IY21 1712 aaKnown RBP0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 MRPL33O75394 65 aaKnown RBP0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 DEFB130BP0DP73 79 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 DEFB130AP0DP74 79 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 IQGAP1P46940 1657 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 UNC79Q9P2D8 2635 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 STAB1Q9NY15 2570 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
CAPRIN1-208ENST00000530008 NBEAL1Q6ZS30 2694 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 LYNX1G3V0Z9 82 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 NMES1Q9C002 83 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 KIAA0586Q9BVV6 1533 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 NCOR2Q9Y618 2525 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 IGSF10Q6WRI0 2623 aa0.41□□□□□ -2.34
CAPRIN1-208ENST00000530008 ABCC8Q09428 1581 aa0.4□□□□□ -2.34
CAPRIN1-208ENST00000530008 MUC2Q02817 5179 aa0.4□□□□□ -2.34
CAPRIN1-208ENST00000530008 AKAP13Q12802 2813 aa0.4□□□□□ -2.35
CAPRIN1-208ENST00000530008 OTOGQ6ZRI0 2925 aa0.4□□□□□ -2.35
CAPRIN1-208ENST00000530008 SNRPGP15A8MWD9 76 aa0.4□□□□□ -2.35
CAPRIN1-208ENST00000530008 IAPPP10997 89 aa0.4□□□□□ -2.35
CAPRIN1-208ENST00000530008 LMO7Q8WWI1 1683 aa0.4□□□□□ -2.35
CAPRIN1-208ENST00000530008 PRKDCP78527 4128 aaKnown RBP0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 KMT2DO14686 5537 aa0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 CEP290O15078 2479 aa0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 MAP1BP46821 2468 aaKnown RBP0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 HIVEP3Q5T1R4 2406 aa0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 MAST4O15021 2626 aa0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 ITPR2Q14571 2701 aa0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 USP9YO00507 2555 aaPredicted RBP0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 USP9XQ93008 2570 aaPredicted RBP0.39□□□□□ -2.35
CAPRIN1-208ENST00000530008 PCNX1Q96RV3 2341 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 NF1P21359 2839 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 NIPBLQ6KC79 2804 aaeCLIP0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 NBEAL2Q6ZNJ1 2754 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 CHD8Q9HCK8 2581 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 TNXBP22105 4242 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 RPS27P42677 84 aaKnown RBP0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 MINOS1Q5TGZ0 78 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 RPS27LQ71UM5 84 aaKnown RBP0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 CEP295Q9C0D2 2601 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 MYO9AB2RTY4 2548 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 COL6A3P12111 3177 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 ITPR3Q14573 2671 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 STAB2Q8WWQ8 2551 aa0.38□□□□□ -2.35
CAPRIN1-208ENST00000530008 CFAP46Q8IYW2 2715 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 ITPR1Q14643 2758 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 PRM1P04553 51 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 CENPEQ02224 2701 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 WDR87Q6ZQQ6 2873 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 ABCA2Q9BZC7 2435 aa0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 UTP20O75691 2785 aaKnown RBP0.37□□□□□ -2.35
CAPRIN1-208ENST00000530008 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 LRRK2Q5S007 2527 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 MYO18BQ8IUG5 2567 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 SERF2P84101 59 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 LINC00308Q8TCZ7 52 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 MTORP42345 2549 aa0.36□□□□□ -2.35
CAPRIN1-208ENST00000530008 TGP01266 2768 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms