RNA–Protein interactions for RNA: ENST00000529379.1

NUP98-216, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-216ENST00000529379 WFDC10BQ8IUB3 73 aa3.04□□□□□ -1.92
NUP98-216ENST00000529379 POLQO75417 2590 aa3.04□□□□□ -1.92
NUP98-216ENST00000529379 LRRK2Q5S007 2527 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 SVEP1Q4LDE5 3571 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 EPG5Q9HCE0 2579 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 IGLV1-50A0A075B6I6 118 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.03□□□□□ -1.92
NUP98-216ENST00000529379 NDUFB1O75438 58 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 SPRR1AP35321 89 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 C1orf137Q5JT78 98 aa3.03□□□□□ -1.92
NUP98-216ENST00000529379 PTPN13Q12923 2485 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 ZANQ9Y493 2812 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 FAM208BQ5VWN6 2430 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 SETXQ7Z333 2677 aaKnown RBP3.02□□□□□ -1.93
NUP98-216ENST00000529379 SPRR4Q96PI1 79 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 SMR3AQ99954 134 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 PKIGQ9Y2B9 76 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 TLN2Q9Y4G6 2542 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 CRYBG3Q68DQ2 2970 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 C2CD3Q4AC94 2353 aa3.02□□□□□ -1.93
NUP98-216ENST00000529379 LCE6AA0A183 80 aa3.01□□□□□ -1.93
NUP98-216ENST00000529379 C3orf84H3BNL1 204 aa3.01□□□□□ -1.93
NUP98-216ENST00000529379 UBE2BP63146 152 aa3.01□□□□□ -1.93
NUP98-216ENST00000529379 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
NUP98-216ENST00000529379 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
NUP98-216ENST00000529379 APCP25054 2843 aa3.01□□□□□ -1.93
NUP98-216ENST00000529379 ITPR3Q14573 2671 aa3□□□□□ -1.93
NUP98-216ENST00000529379 WNK1Q9H4A3 2382 aa3□□□□□ -1.93
NUP98-216ENST00000529379 ABCA12Q86UK0 2595 aa3□□□□□ -1.93
NUP98-216ENST00000529379 A0A1W2PNM2 257 aa3□□□□□ -1.93
NUP98-216ENST00000529379 H3BPC8 53 aa3□□□□□ -1.93
NUP98-216ENST00000529379 MP68P56378 58 aa3□□□□□ -1.93
NUP98-216ENST00000529379 V9GYY9 64 aa3□□□□□ -1.93
NUP98-216ENST00000529379 FP248Q71RG6 208 aaPredicted RBP2.99□□□□□ -1.93
NUP98-216ENST00000529379 Q9BRP9 147 aa2.99□□□□□ -1.93
NUP98-216ENST00000529379 HIGD2AQ9BW72 106 aa2.99□□□□□ -1.93
NUP98-216ENST00000529379 hDV103S1A0JD37 113 aa2.98□□□□□ -1.93
NUP98-216ENST00000529379 HCG22E2RYF7 251 aa2.98□□□□□ -1.93
NUP98-216ENST00000529379 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
NUP98-216ENST00000529379 RETNQ9HD89 108 aa2.98□□□□□ -1.93
NUP98-216ENST00000529379 NIPBLQ6KC79 2804 aaeCLIP2.98□□□□□ -1.93
NUP98-216ENST00000529379 VPS13CQ709C8 3753 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 Q1T7F1 81 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 ZCCHC13Q8WW36 166 aaKnown RBP2.97□□□□□ -1.93
NUP98-216ENST00000529379 CYP4F30PQ9H0H9 118 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 LINC00588Q9Y4M8 146 aa2.97□□□□□ -1.93
NUP98-216ENST00000529379 FLNAP21333 2647 aaKnown RBP2.96□□□□□ -1.94
NUP98-216ENST00000529379 USP24Q9UPU5 2620 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 NF1P21359 2839 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 HIVEP2P31629 2446 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 C16orf90A8MZG2 172 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 PSCAO43653 123 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 UBE2AP49459 152 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 SEC61GP60059 68 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
NUP98-216ENST00000529379 BRK1Q8WUW1 75 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 JMJD1CQ15652 2540 aa2.96□□□□□ -1.94
NUP98-216ENST00000529379 PDZD2O15018 2839 aa2.95□□□□□ -1.94
NUP98-216ENST00000529379 SPRR1BP22528 89 aa2.95□□□□□ -1.94
NUP98-216ENST00000529379 SPANXA2-OT1Q8N9U9 137 aa2.95□□□□□ -1.94
NUP98-216ENST00000529379 NBEAL2Q6ZNJ1 2754 aa2.95□□□□□ -1.94
NUP98-216ENST00000529379 NOTCH2Q04721 2471 aa2.95□□□□□ -1.94
NUP98-216ENST00000529379 K7EQZ3 153 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 C1orf195Q5TG92 126 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 IGFL1Q6UW32 110 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 C1orf64Q8NEQ6 169 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 B9D2Q9BPU9 175 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 SONP18583 2426 aaKnown RBP2.94□□□□□ -1.94
NUP98-216ENST00000529379 ZFYVE26Q68DK2 2539 aa2.94□□□□□ -1.94
NUP98-216ENST00000529379 GCN1Q92616 2671 aaKnown RBP2.93□□□□□ -1.94
NUP98-216ENST00000529379 CCDC168Q8NDH2 2452 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 A8MWP4 228 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 RPL37AP61513 92 aaKnown RBP2.93□□□□□ -1.94
NUP98-216ENST00000529379 DEFB116Q30KQ4 102 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 CASC2Q6XLA1 102 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
NUP98-216ENST00000529379 PRR15Q8IV56 129 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 TP53AIP1Q9HCN2 124 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 ZFHX3Q15911 3703 aa2.93□□□□□ -1.94
NUP98-216ENST00000529379 SETD2Q9BYW2 2564 aaPredicted RBP2.93□□□□□ -1.94
NUP98-216ENST00000529379 A0A087WSZ3 146 aa2.92□□□□□ -1.94
NUP98-216ENST00000529379 TRAV22A0A0B4J277 110 aa2.92□□□□□ -1.94
NUP98-216ENST00000529379 FAM229BQ4G0N7 80 aa2.92□□□□□ -1.94
NUP98-216ENST00000529379 LINC00208Q96KT6 92 aa2.92□□□□□ -1.94
NUP98-216ENST00000529379 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
NUP98-216ENST00000529379 UNC79Q9P2D8 2635 aa2.91□□□□□ -1.94
NUP98-216ENST00000529379 AKAP9Q99996 3911 aa2.91□□□□□ -1.94
NUP98-216ENST00000529379 H0Y9P7 68 aa2.91□□□□□ -1.94
NUP98-216ENST00000529379 WFDC13Q8IUB5 93 aa2.91□□□□□ -1.94
NUP98-216ENST00000529379 UBE2DNLQ8IWF7 75 aa2.91□□□□□ -1.94
NUP98-216ENST00000529379 TENM4Q6N022 2769 aa2.9□□□□□ -1.94
NUP98-216ENST00000529379 A0A096LNI7 61 aa2.9□□□□□ -1.95
NUP98-216ENST00000529379 IGKV2-24A0A0C4DH68 120 aa2.9□□□□□ -1.95
NUP98-216ENST00000529379 A0A1W2PNN7 141 aa2.9□□□□□ -1.95
NUP98-216ENST00000529379 LINC00472Q9H8W2 130 aa2.9□□□□□ -1.95
NUP98-216ENST00000529379 ZNF706Q9Y5V0 76 aaPredicted RBP2.9□□□□□ -1.95
NUP98-216ENST00000529379 MTORP42345 2549 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms