RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TAX1BP3O14907 124 aa4.75□□□□□ -1.65
SSBP3-211ENST00000528787 Q8NBF4 154 aa4.75□□□□□ -1.65
SSBP3-211ENST00000528787 ERC2-IT1O76042 136 aa4.74□□□□□ -1.65
SSBP3-211ENST00000528787 KRTAP1-4P0C5Y4 121 aa4.74□□□□□ -1.65
SSBP3-211ENST00000528787 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
SSBP3-211ENST00000528787 C9orf153Q5TBE3 101 aa4.74□□□□□ -1.65
SSBP3-211ENST00000528787 CLEC2BQ92478 149 aa4.74□□□□□ -1.65
SSBP3-211ENST00000528787 JMJD7-PLA2G4BH0Y9G9 81 aa4.73□□□□□ -1.65
SSBP3-211ENST00000528787 SCGB1A1P11684 91 aa4.73□□□□□ -1.65
SSBP3-211ENST00000528787 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
SSBP3-211ENST00000528787 IGLV9-49A0A0B4J1Y8 123 aa4.72□□□□□ -1.65
SSBP3-211ENST00000528787 TCL1BO95988 128 aa4.72□□□□□ -1.65
SSBP3-211ENST00000528787 Q8N377 158 aa4.72□□□□□ -1.65
SSBP3-211ENST00000528787 ST20-AS1Q8NBB2 130 aa4.72□□□□□ -1.65
SSBP3-211ENST00000528787 FAM218AQ96MZ4 157 aa4.72□□□□□ -1.65
SSBP3-211ENST00000528787 H3BT86 120 aa4.71□□□□□ -1.66
SSBP3-211ENST00000528787 SPINK1P00995 79 aa4.71□□□□□ -1.66
SSBP3-211ENST00000528787 BAALC-AS2P0C853 105 aa4.71□□□□□ -1.66
SSBP3-211ENST00000528787 PDE6GP18545 87 aa4.71□□□□□ -1.66
SSBP3-211ENST00000528787 NDUFV3P56181 108 aaKnown RBP4.71□□□□□ -1.66
SSBP3-211ENST00000528787 RPS29P62273 56 aaKnown RBP4.71□□□□□ -1.66
SSBP3-211ENST00000528787 CD164Q04900 197 aa4.71□□□□□ -1.66
SSBP3-211ENST00000528787 LINC01547P58512 204 aaPredicted RBP4.7□□□□□ -1.66
SSBP3-211ENST00000528787 MOBPQ13875 183 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 LINC00304Q8N9R0 145 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 DSCR8Q96T75 97 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 LIMD2Q9BT23 127 aa4.7□□□□□ -1.66
SSBP3-211ENST00000528787 FLG2Q5D862 2391 aaPredicted RBP4.69□□□□□ -1.66
SSBP3-211ENST00000528787 IGLV8-61A0A075B6I0 122 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 A0A087X002 238 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 C9JAW5 83 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 H3BMG7 143 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 K7EP34 96 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 KRTAP10-8P60410 259 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 RBM3P98179 157 aaKnown RBP4.69□□□□□ -1.66
SSBP3-211ENST00000528787 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
SSBP3-211ENST00000528787 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
SSBP3-211ENST00000528787 HERC2O95714 4834 aa4.68□□□□□ -1.66
SSBP3-211ENST00000528787 A0A1B0GV72 72 aa4.68□□□□□ -1.66
SSBP3-211ENST00000528787 A0A1B0GW54 56 aa4.68□□□□□ -1.66
SSBP3-211ENST00000528787 F8W1H4 67 aa4.67□□□□□ -1.66
SSBP3-211ENST00000528787 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
SSBP3-211ENST00000528787 SS18L2Q9UHA2 77 aa4.67□□□□□ -1.66
SSBP3-211ENST00000528787 KRTAP13-2Q52LG2 175 aa4.66□□□□□ -1.66
SSBP3-211ENST00000528787 TEN1Q86WV5 123 aa4.66□□□□□ -1.66
SSBP3-211ENST00000528787 C3orf22Q8N5N4 141 aa4.66□□□□□ -1.66
SSBP3-211ENST00000528787 ANAPC11Q9NYG5 84 aa4.66□□□□□ -1.66
SSBP3-211ENST00000528787 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
SSBP3-211ENST00000528787 Q6Q795 121 aa4.65□□□□□ -1.67
SSBP3-211ENST00000528787 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
SSBP3-211ENST00000528787 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
SSBP3-211ENST00000528787 VPS25Q9BRG1 176 aa4.64□□□□□ -1.67
SSBP3-211ENST00000528787 FAT1Q14517 4588 aa4.63□□□□□ -1.67
SSBP3-211ENST00000528787 TRBV7-4A0A0J9YYF1 115 aa4.63□□□□□ -1.67
SSBP3-211ENST00000528787 MT1HL1P0DM35 61 aa4.63□□□□□ -1.67
SSBP3-211ENST00000528787 Q5XG85 94 aa4.63□□□□□ -1.67
SSBP3-211ENST00000528787 DMBT1Q9UGM3 2413 aaPredicted RBP4.63□□□□□ -1.67
SSBP3-211ENST00000528787 LOC110117498A0A087WWA1 95 aa4.62□□□□□ -1.67
SSBP3-211ENST00000528787 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
SSBP3-211ENST00000528787 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
SSBP3-211ENST00000528787 CCKP06307 115 aa4.61□□□□□ -1.67
SSBP3-211ENST00000528787 FP248Q71RG6 208 aaPredicted RBP4.61□□□□□ -1.67
SSBP3-211ENST00000528787 K7ERU9 68 aa4.6□□□□□ -1.67
SSBP3-211ENST00000528787 ASB16-AS1Q495Z4 193 aa4.6□□□□□ -1.67
SSBP3-211ENST00000528787 OBSCN-AS1Q96MR7 158 aa4.6□□□□□ -1.67
SSBP3-211ENST00000528787 HRCT1Q6UXD1 115 aa4.58□□□□□ -1.68
SSBP3-211ENST00000528787 ABCA13Q86UQ4 5058 aa4.58□□□□□ -1.68
SSBP3-211ENST00000528787 J3KT08 172 aa4.57□□□□□ -1.68
SSBP3-211ENST00000528787 Q6ZQT0 140 aa4.57□□□□□ -1.68
SSBP3-211ENST00000528787 C14orf132Q9NPU4 83 aa4.57□□□□□ -1.68
SSBP3-211ENST00000528787 PRO0461Q9UI25 63 aa4.57□□□□□ -1.68
SSBP3-211ENST00000528787 J3QR89 54 aa4.56□□□□□ -1.68
SSBP3-211ENST00000528787 C5orf47Q569G3 176 aa4.56□□□□□ -1.68
SSBP3-211ENST00000528787 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
SSBP3-211ENST00000528787 A0A087WSZ3 146 aa4.55□□□□□ -1.68
SSBP3-211ENST00000528787 ACYP1P07311 99 aa4.55□□□□□ -1.68
SSBP3-211ENST00000528787 A0A1W2PNM2 257 aa4.54□□□□□ -1.68
SSBP3-211ENST00000528787 ETDBQ3ZM63 59 aa4.54□□□□□ -1.68
SSBP3-211ENST00000528787 PRR4Q16378 134 aa4.53□□□□□ -1.68
SSBP3-211ENST00000528787 NREPQ16612 68 aa4.53□□□□□ -1.68
SSBP3-211ENST00000528787 UBL5Q9BZL1 73 aa4.53□□□□□ -1.68
SSBP3-211ENST00000528787 IGLV7-46A0A075B6I9 117 aa4.52□□□□□ -1.69
SSBP3-211ENST00000528787 NDUFB1O75438 58 aa4.52□□□□□ -1.69
SSBP3-211ENST00000528787 SMCPP49901 116 aaPredicted RBP4.52□□□□□ -1.69
SSBP3-211ENST00000528787 FAM240AA0A1B0GVK7 77 aa4.51□□□□□ -1.69
SSBP3-211ENST00000528787 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
SSBP3-211ENST00000528787 C1orf195Q5TG92 126 aa4.5□□□□□ -1.69
SSBP3-211ENST00000528787 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
SSBP3-211ENST00000528787 TNXBP22105 4242 aa4.49□□□□□ -1.69
SSBP3-211ENST00000528787 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
SSBP3-211ENST00000528787 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
SSBP3-211ENST00000528787 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
SSBP3-211ENST00000528787 SIGMAR1Q99720 223 aa4.48□□□□□ -1.69
SSBP3-211ENST00000528787 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
SSBP3-211ENST00000528787 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
SSBP3-211ENST00000528787 BPY2O14599 106 aa4.46□□□□□ -1.7
SSBP3-211ENST00000528787 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
SSBP3-211ENST00000528787 RETNLBQ9BQ08 111 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms