RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SPRR1B	P22528	89 aa		14.62	□□□□□ -0.07
GSDMD-208	ENST00000528475	UBE2DNL	Q8IWF7	75 aa		14.62	□□□□□ -0.07
GSDMD-208	ENST00000528475	ZCCHC13	Q8WW36	166 aa	Known RBP	14.61	□□□□□ -0.07
GSDMD-208	ENST00000528475	UBE2A	P49459	152 aa		14.59	□□□□□ -0.07
GSDMD-208	ENST00000528475		A0A087WSZ3	146 aa		14.58	□□□□□ -0.08
GSDMD-208	ENST00000528475	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	14.57	□□□□□ -0.08
GSDMD-208	ENST00000528475	PHF5A	Q7RTV0	110 aa	Known RBP	14.57	□□□□□ -0.08
GSDMD-208	ENST00000528475	KRTAP11-1	Q8IUC1	163 aa		14.57	□□□□□ -0.08
GSDMD-208	ENST00000528475	PKIG	Q9Y2B9	76 aa		14.56	□□□□□ -0.08
GSDMD-208	ENST00000528475	MGAM2	Q2M2H8	2515 aa		14.55	□□□□□ -0.08
GSDMD-208	ENST00000528475	CHTF8	P0CG12	524 aa		14.54	□□□□□ -0.08
GSDMD-208	ENST00000528475	C9orf163	Q8N9P6	203 aa		14.54	□□□□□ -0.08
GSDMD-208	ENST00000528475	LINC00474	Q9P2X8	69 aa		14.54	□□□□□ -0.08
GSDMD-208	ENST00000528475	DEFB116	Q30KQ4	102 aa		14.5	□□□□□ -0.09
GSDMD-208	ENST00000528475	LRCOL1	A6NCL2	159 aa		14.5	□□□□□ -0.09
GSDMD-208	ENST00000528475	FAM229B	Q4G0N7	80 aa		14.5	□□□□□ -0.09
GSDMD-208	ENST00000528475	DNAH10	Q8IVF4	4471 aa		14.48	□□□□□ -0.09
GSDMD-208	ENST00000528475	B9D2	Q9BPU9	175 aa		14.46	□□□□□ -0.09
GSDMD-208	ENST00000528475	KRTAP29-1	A8MX34	341 aa	Predicted RBP	14.46	□□□□□ -0.09
GSDMD-208	ENST00000528475	WFDC13	Q8IUB5	93 aa		14.45	□□□□□ -0.1
GSDMD-208	ENST00000528475	DNAH9	Q9NYC9	4486 aa		14.44	□□□□□ -0.1
GSDMD-208	ENST00000528475	DYNC2H1	Q8NCM8	4307 aa	Known RBP	14.43	□□□□□ -0.1
GSDMD-208	ENST00000528475	hDV103S1	A0JD37	113 aa		14.43	□□□□□ -0.1
GSDMD-208	ENST00000528475	NBDY	A0A0U1RRE5	68 aa		14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475	RPL37A	P61513	92 aa	Known RBP	14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475	LINC00472	Q9H8W2	130 aa		14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475	LINC00336	Q6ZUF6	198 aa		14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475	KRTAP13-1	Q8IUC0	172 aa		14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475	PRR15	Q8IV56	129 aa		14.42	□□□□□ -0.1
GSDMD-208	ENST00000528475		A8MWP4	228 aa		14.4	□□□□□ -0.1
GSDMD-208	ENST00000528475		Q6ZRN7	208 aa	Predicted RBP	14.4	□□□□□ -0.1
GSDMD-208	ENST00000528475	NDUFB1	O75438	58 aa		14.39	□□□□□ -0.11
GSDMD-208	ENST00000528475	CYP4F30P	Q9H0H9	118 aa		14.39	□□□□□ -0.11
GSDMD-208	ENST00000528475	MP68	P56378	58 aa		14.38	□□□□□ -0.11
GSDMD-208	ENST00000528475	CASC2	Q6XLA1	102 aa		14.36	□□□□□ -0.11
GSDMD-208	ENST00000528475	PRO0628	Q9UI54	55 aa		14.35	□□□□□ -0.11
GSDMD-208	ENST00000528475	PANO1	I0J062	215 aa		14.35	□□□□□ -0.11
GSDMD-208	ENST00000528475	C1orf64	Q8NEQ6	169 aa		14.35	□□□□□ -0.11
GSDMD-208	ENST00000528475	LYST	Q99698	3801 aa		14.35	□□□□□ -0.11
GSDMD-208	ENST00000528475	STAB2	Q8WWQ8	2551 aa		14.34	□□□□□ -0.11
GSDMD-208	ENST00000528475	NUPR2	A6NF83	97 aa		14.33	□□□□□ -0.12
GSDMD-208	ENST00000528475		H3BPC8	53 aa		14.33	□□□□□ -0.12
GSDMD-208	ENST00000528475	MPLKIP	Q8TAP9	179 aa		14.33	□□□□□ -0.12
GSDMD-208	ENST00000528475	TRAV22	A0A0B4J277	110 aa		14.32	□□□□□ -0.12
GSDMD-208	ENST00000528475	SPACA4	Q8TDM5	124 aa		14.3	□□□□□ -0.12
GSDMD-208	ENST00000528475	COL7A1	Q02388	2944 aa		14.28	□□□□□ -0.12
GSDMD-208	ENST00000528475	LINC00208	Q96KT6	92 aa		14.27	□□□□□ -0.12
GSDMD-208	ENST00000528475		H0Y9P7	68 aa		14.26	□□□□□ -0.13
GSDMD-208	ENST00000528475	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	14.24	□□□□□ -0.13
GSDMD-208	ENST00000528475	LINC00483	Q53H64	154 aa		14.24	□□□□□ -0.13
GSDMD-208	ENST00000528475	MMP24-AS1	A0A0U1RRL7	71 aa		14.22	□□□□□ -0.13
GSDMD-208	ENST00000528475		Q1T7F1	81 aa		14.22	□□□□□ -0.13
GSDMD-208	ENST00000528475	SPANXA2-OT1	Q8N9U9	137 aa		14.22	□□□□□ -0.13
GSDMD-208	ENST00000528475		Q96NJ1	140 aa		14.19	□□□□□ -0.14
GSDMD-208	ENST00000528475	DNAH7	Q8WXX0	4024 aa		14.18	□□□□□ -0.14
GSDMD-208	ENST00000528475	PRR4	Q16378	134 aa		14.18	□□□□□ -0.14
GSDMD-208	ENST00000528475		A0A087WTM6	91 aa		14.17	□□□□□ -0.14
GSDMD-208	ENST00000528475	ZNF706	Q9Y5V0	76 aa	Predicted RBP	14.16	□□□□□ -0.14
GSDMD-208	ENST00000528475	IGLV9-49	A0A0B4J1Y8	123 aa		14.15	□□□□□ -0.14
GSDMD-208	ENST00000528475	ASB16-AS1	Q495Z4	193 aa		14.15	□□□□□ -0.14
GSDMD-208	ENST00000528475	PLEC	Q15149	4684 aa	Known RBP	14.15	□□□□□ -0.14
GSDMD-208	ENST00000528475	CSMD3	Q7Z407	3707 aa		14.14	□□□□□ -0.15
GSDMD-208	ENST00000528475	SRRM2	Q9UQ35	2752 aa	Known RBP	14.14	□□□□□ -0.15
GSDMD-208	ENST00000528475	BRK1	Q8WUW1	75 aa		14.13	□□□□□ -0.15
GSDMD-208	ENST00000528475	MOBP	Q13875	183 aa		14.11	□□□□□ -0.15
GSDMD-208	ENST00000528475	WWC2-AS2	Q96NR7	200 aa		14.1	□□□□□ -0.15
GSDMD-208	ENST00000528475	IGLV5-52	A0A0A0MRZ9	124 aa		14.09	□□□□□ -0.15
GSDMD-208	ENST00000528475	TP53AIP1	Q9HCN2	124 aa		14.08	□□□□□ -0.16
GSDMD-208	ENST00000528475	RTL8C	O15255	209 aa		14.07	□□□□□ -0.16
GSDMD-208	ENST00000528475	PSORS1C2	Q9UIG4	136 aa		14.07	□□□□□ -0.16
GSDMD-208	ENST00000528475	PLAC8	Q9NZF1	115 aa		14.06	□□□□□ -0.16
GSDMD-208	ENST00000528475	C8orf17	Q9NRJ1	99 aa		14.05	□□□□□ -0.16
GSDMD-208	ENST00000528475	VPS13D	Q5THJ4	4388 aa		14.05	□□□□□ -0.16
GSDMD-208	ENST00000528475		V9GYY9	64 aa		14.04	□□□□□ -0.16
GSDMD-208	ENST00000528475	DNHD1	Q96M86	4753 aa		14.02	□□□□□ -0.16
GSDMD-208	ENST00000528475	TENM2	Q9NT68	2774 aa		14.02	□□□□□ -0.16
GSDMD-208	ENST00000528475	ZNF861P	O60384	105 aa		14.02	□□□□□ -0.16
GSDMD-208	ENST00000528475		Q6ZR54	194 aa		14.02	□□□□□ -0.17
GSDMD-208	ENST00000528475		A0A1B0GVX0	72 aa		14	□□□□□ -0.17
GSDMD-208	ENST00000528475	KRTAP21-3	Q3LHN1	58 aa		14	□□□□□ -0.17
GSDMD-208	ENST00000528475	MEGF8	Q7Z7M0	2845 aa		13.99	□□□□□ -0.17
GSDMD-208	ENST00000528475	PRKDC	P78527	4128 aa	Known RBP	13.99	□□□□□ -0.17
GSDMD-208	ENST00000528475	IGLV7-46	A0A075B6I9	117 aa		13.98	□□□□□ -0.17
GSDMD-208	ENST00000528475	CDK2AP2	O75956	126 aa		13.94	□□□□□ -0.18
GSDMD-208	ENST00000528475	IGHV6-1	A0A0B4J1U7	121 aa		13.93	□□□□□ -0.18
GSDMD-208	ENST00000528475	PSPHP1	O15172	72 aa		13.92	□□□□□ -0.18
GSDMD-208	ENST00000528475	STARD9	Q9P2P6	4700 aa		13.91	□□□□□ -0.18
GSDMD-208	ENST00000528475	C1orf195	Q5TG92	126 aa		13.91	□□□□□ -0.18
GSDMD-208	ENST00000528475	MRPL34	Q9BQ48	92 aa	Known RBP	13.91	□□□□□ -0.18
GSDMD-208	ENST00000528475	ANAPC11	Q9NYG5	84 aa		13.91	□□□□□ -0.18
GSDMD-208	ENST00000528475	HECTD4	Q9Y4D8	3996 aa		13.89	□□□□□ -0.19
GSDMD-208	ENST00000528475		Q8N9P0	234 aa	Predicted RBP	13.88	□□□□□ -0.19
GSDMD-208	ENST00000528475	DNAH17	Q9UFH2	4485 aa		13.88	□□□□□ -0.19
GSDMD-208	ENST00000528475	LIMD2	Q9BT23	127 aa		13.86	□□□□□ -0.19
GSDMD-208	ENST00000528475		A8MUN3	132 aa		13.86	□□□□□ -0.19
GSDMD-208	ENST00000528475	CD164	Q04900	197 aa		13.86	□□□□□ -0.19
GSDMD-208	ENST00000528475	COA5	Q86WW8	74 aa		13.85	□□□□□ -0.19
GSDMD-208	ENST00000528475	IGLV7-43	P04211	117 aa		13.84	□□□□□ -0.19
GSDMD-208	ENST00000528475	SEC61G	P60059	68 aa		13.84	□□□□□ -0.19
GSDMD-208	ENST00000528475	NDUFS5	O43920	106 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms