RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 TRAV21A0A0B4J279 112 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 DEFB108AA8MXU0 73 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 JMJD7-PLA2G4BH0Y9G9 81 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 UQCR11O14957 56 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 LINC00322Q6ZN03 302 aaPredicted RBP2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 KRTAP13-1Q8IUC0 172 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 SPACA4Q8TDM5 124 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 LINC00208Q96KT6 92 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 SETXQ7Z333 2677 aaKnown RBP2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 TLN2Q9Y4G6 2542 aa2.11□□□□□ -2.07
CTNNA1-238ENST00000523298 DCHS2Q6V1P9 2916 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 NBDYA0A0U1RRE5 68 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 H0Y9P7 68 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 NDUFB1O75438 58 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 MGPP08493 103 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 SPATA8Q6RVD6 105 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 ENHOQ6UWT2 76 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 CCL19Q99731 98 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 F8P00451 2351 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 CELSR2Q9HCU4 2923 aa2.1□□□□□ -2.07
CTNNA1-238ENST00000523298 APCP25054 2843 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 SONP18583 2426 aaKnown RBP2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 ITPR3Q14573 2671 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 A0A0G2JQZ4 141 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 CTXND1A0A1B0GTU2 59 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 LYNX1G3V0Z9 82 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 IGKV4-1P06312 121 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 LYNX1P0DP58 116 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 SERF2P84101 59 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 LINC01590Q5TEZ4 76 aa2.09□□□□□ -2.07
CTNNA1-238ENST00000523298 FLNAP21333 2647 aaKnown RBP2.09□□□□□ -2.08
CTNNA1-238ENST00000523298 TEP1Q99973 2627 aaKnown RBP2.09□□□□□ -2.08
CTNNA1-238ENST00000523298 CSMD1Q96PZ7 3565 aa2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 ADGRG4Q8IZF6 3080 aa2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 MAP1AP78559 2803 aaPredicted RBP2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 IGKV2-40A0A087WW87 121 aaPredicted RBP2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 IGKV2D-40P01614 121 aaPredicted RBP2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 RPL37AP61513 92 aaKnown RBP2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 UNC79Q9P2D8 2635 aa2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 VPS13CQ709C8 3753 aa2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 PDZD2O15018 2839 aa2.08□□□□□ -2.08
CTNNA1-238ENST00000523298 ZNF469Q96JG9 3925 aaPredicted RBP2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 TACC2O95359 2948 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 TRBV6-1A0A0K0K1D8 114 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 RNASE3P12724 160 aaKnown RBP2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 PLNP26678 52 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 C10orf113Q5VZT2 155 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 DEFB108BQ8NET1 73 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 SMR3AQ99954 134 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 UBL5Q9BZL1 73 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 WFDC10AQ9H1F0 79 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 LINC00472Q9H8W2 130 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 FBN2P35556 2912 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 ASH1LQ9NR48 2969 aaKnown RBP2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 CSMD2Q7Z408 3487 aa2.07□□□□□ -2.08
CTNNA1-238ENST00000523298 TEX15Q9BXT5 2789 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 IGKV2-24A0A0C4DH68 120 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 IGIPA6NJ69 53 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 FXYD3Q14802 87 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 C5orf56Q8N8D9 126 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 WFDC9Q8NEX5 89 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 Q96NJ1 140 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 TMEM14CQ9P0S9 112 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 KLK9Q9UKQ9 250 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 WNK1Q9H4A3 2382 aa2.06□□□□□ -2.08
CTNNA1-238ENST00000523298 MTORP42345 2549 aa2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 TRGV4A0A0C4DH28 118 aa2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 IGKV2-29A2NJV5 120 aaPredicted RBP2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 LINC01546A6NGU7 62 aa2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 PRB3Q04118 309 aaPredicted RBP2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 C10orf55Q5SWW7 151 aa2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 ZNF625Q96I27 306 aaPredicted RBP2.05□□□□□ -2.08
CTNNA1-238ENST00000523298 MAST4O15021 2626 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 LINC00959A0A1B0GUT2 108 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 M0R1W7 72 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 PIN1P1O15428 100 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 FN1P02751 2386 aaKnown RBP2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 HIVEP1P15822 2718 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 C2CD3Q4AC94 2353 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 AKAP9Q99996 3911 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 ZANQ9Y493 2812 aa2.04□□□□□ -2.08
CTNNA1-238ENST00000523298 CELSR1Q9NYQ6 3014 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 I3L3M4 83 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 SPINK4O60575 86 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 COX17Q14061 63 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 GAFA1Q96PS6 74 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 TNCP24821 2201 aa2.03□□□□□ -2.08
CTNNA1-238ENST00000523298 A0A096LNT2 108 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 IGLV6-57P01721 117 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 ARL14EPLP0DKL9 152 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 DEFB112Q30KQ8 113 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 PIGYQ3MUY2 71 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 JMJD1CQ15652 2540 aa2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 SETD2Q9BYW2 2564 aaPredicted RBP2.02□□□□□ -2.09
CTNNA1-238ENST00000523298 NDUFA4O00483 81 aa2.01□□□□□ -2.09
CTNNA1-238ENST00000523298 COA5Q86WW8 74 aa2.01□□□□□ -2.09
CTNNA1-238ENST00000523298 LEAP2Q969E1 77 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms