RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 HSPG2P98160 4391 aa13.76□□□□□ -0.21
PTP4A3-204ENST00000521578 IGKV3D-7A0A0C4DH55 119 aa13.76□□□□□ -0.21
PTP4A3-204ENST00000521578 LINC01547P58512 204 aaPredicted RBP13.76□□□□□ -0.21
PTP4A3-204ENST00000521578 Q8N377 158 aa13.76□□□□□ -0.21
PTP4A3-204ENST00000521578 FAM236AA0A1B0GUQ0 79 aa13.74□□□□□ -0.21
PTP4A3-204ENST00000521578 FAM236BA0A1B0GV22 79 aa13.74□□□□□ -0.21
PTP4A3-204ENST00000521578 SMR3BP02814 79 aaPredicted RBP13.74□□□□□ -0.21
PTP4A3-204ENST00000521578 IGLV5-48A0A075B6I7 105 aa13.71□□□□□ -0.21
PTP4A3-204ENST00000521578 EPM2AB3EWF7 344 aa13.7□□□□□ -0.22
PTP4A3-204ENST00000521578 HIST1H4AP62805 103 aaKnown RBP13.7□□□□□ -0.22
PTP4A3-204ENST00000521578 DEFB105AQ8NG35 78 aa13.7□□□□□ -0.22
PTP4A3-204ENST00000521578 PHF5AQ7RTV0 110 aaKnown RBP13.68□□□□□ -0.22
PTP4A3-204ENST00000521578 FAT1Q14517 4588 aa13.67□□□□□ -0.22
PTP4A3-204ENST00000521578 ERC2-IT1O76042 136 aa13.66□□□□□ -0.22
PTP4A3-204ENST00000521578 UBE2BP63146 152 aa13.66□□□□□ -0.22
PTP4A3-204ENST00000521578 Q6ZVQ6 151 aa13.66□□□□□ -0.22
PTP4A3-204ENST00000521578 ST20-AS1Q8NBB2 130 aa13.65□□□□□ -0.22
PTP4A3-204ENST00000521578 KRTAP17-1Q9BYP8 105 aa13.62□□□□□ -0.23
PTP4A3-204ENST00000521578 A0A087WVE0 104 aa13.59□□□□□ -0.23
PTP4A3-204ENST00000521578 FAM19A1Q7Z5A9 133 aa13.59□□□□□ -0.23
PTP4A3-204ENST00000521578 VPS13BQ7Z7G8 4022 aa13.59□□□□□ -0.23
PTP4A3-204ENST00000521578 CCDC179H3BU77 68 aa13.59□□□□□ -0.23
PTP4A3-204ENST00000521578 HERC2O95714 4834 aa13.58□□□□□ -0.24
PTP4A3-204ENST00000521578 ATOX1O00244 68 aa13.58□□□□□ -0.24
PTP4A3-204ENST00000521578 CXCL6P80162 114 aa13.58□□□□□ -0.24
PTP4A3-204ENST00000521578 KRTAP11-1Q8IUC1 163 aa13.58□□□□□ -0.24
PTP4A3-204ENST00000521578 Q8N1X5 172 aa13.57□□□□□ -0.24
PTP4A3-204ENST00000521578 C3orf22Q8N5N4 141 aa13.57□□□□□ -0.24
PTP4A3-204ENST00000521578 A0A1B0GW54 56 aa13.56□□□□□ -0.24
PTP4A3-204ENST00000521578 H0Y9J4 135 aa13.56□□□□□ -0.24
PTP4A3-204ENST00000521578 FAM229AH3BQW9 127 aa13.56□□□□□ -0.24
PTP4A3-204ENST00000521578 PRLHP81277 87 aa13.55□□□□□ -0.24
PTP4A3-204ENST00000521578 Q5VSD8 79 aa13.55□□□□□ -0.24
PTP4A3-204ENST00000521578 SMIM29Q86T20 159 aa13.55□□□□□ -0.24
PTP4A3-204ENST00000521578 RPL37AP61513 92 aaKnown RBP13.53□□□□□ -0.24
PTP4A3-204ENST00000521578 PSORS1C2Q9UIG4 136 aa13.53□□□□□ -0.24
PTP4A3-204ENST00000521578 C1orf137Q5JT78 98 aa13.52□□□□□ -0.25
PTP4A3-204ENST00000521578 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
PTP4A3-204ENST00000521578 A0A1W2PNM2 257 aa13.5□□□□□ -0.25
PTP4A3-204ENST00000521578 PLA2G1BP04054 148 aaKnown RBP13.49□□□□□ -0.25
PTP4A3-204ENST00000521578 HIGD2AQ9BW72 106 aa13.48□□□□□ -0.25
PTP4A3-204ENST00000521578 Q8NBF4 154 aa13.47□□□□□ -0.25
PTP4A3-204ENST00000521578 UQCRQO14949 82 aa13.47□□□□□ -0.25
PTP4A3-204ENST00000521578 BCE1O60756 84 aa13.47□□□□□ -0.25
PTP4A3-204ENST00000521578 NREPQ16612 68 aa13.47□□□□□ -0.25
PTP4A3-204ENST00000521578 COX7CP15954 63 aa13.46□□□□□ -0.25
PTP4A3-204ENST00000521578 KRTAP10-4P60372 401 aaPredicted RBP13.46□□□□□ -0.25
PTP4A3-204ENST00000521578 SPRR4Q96PI1 79 aa13.45□□□□□ -0.26
PTP4A3-204ENST00000521578 KRTAP4-5Q9BYR2 181 aa13.45□□□□□ -0.26
PTP4A3-204ENST00000521578 IGLV8-61A0A075B6I0 122 aa13.44□□□□□ -0.26
PTP4A3-204ENST00000521578 F8WEM9 126 aa13.44□□□□□ -0.26
PTP4A3-204ENST00000521578 SPRR1BP22528 89 aa13.44□□□□□ -0.26
PTP4A3-204ENST00000521578 UBE2AP49459 152 aa13.44□□□□□ -0.26
PTP4A3-204ENST00000521578 SERP2Q8N6R1 65 aa13.42□□□□□ -0.26
PTP4A3-204ENST00000521578 KRTAP13-1Q8IUC0 172 aa13.42□□□□□ -0.26
PTP4A3-204ENST00000521578 CRYGAP11844 174 aa13.38□□□□□ -0.27
PTP4A3-204ENST00000521578 IGLV7-43P04211 117 aa13.37□□□□□ -0.27
PTP4A3-204ENST00000521578 IGFL1Q6UW32 110 aa13.37□□□□□ -0.27
PTP4A3-204ENST00000521578 BPY2O14599 106 aa13.36□□□□□ -0.27
PTP4A3-204ENST00000521578 C9orf153Q5TBE3 101 aa13.35□□□□□ -0.27
PTP4A3-204ENST00000521578 ABCA13Q86UQ4 5058 aa13.33□□□□□ -0.28
PTP4A3-204ENST00000521578 ZNF861PO60384 105 aa13.31□□□□□ -0.28
PTP4A3-204ENST00000521578 IGKV4-1P06312 121 aa13.31□□□□□ -0.28
PTP4A3-204ENST00000521578 SMIM20Q8N5G0 67 aa13.29□□□□□ -0.28
PTP4A3-204ENST00000521578 FLG2Q5D862 2391 aaPredicted RBP13.27□□□□□ -0.29
PTP4A3-204ENST00000521578 A0A0G2JQZ4 141 aa13.27□□□□□ -0.29
PTP4A3-204ENST00000521578 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
PTP4A3-204ENST00000521578 Q8N9L7 120 aa13.26□□□□□ -0.29
PTP4A3-204ENST00000521578 TRAV7A0A075B6U4 112 aa13.25□□□□□ -0.29
PTP4A3-204ENST00000521578 PKHD1L1Q86WI1 4243 aa13.25□□□□□ -0.29
PTP4A3-204ENST00000521578 ZNF706Q9Y5V0 76 aaPredicted RBP13.25□□□□□ -0.29
PTP4A3-204ENST00000521578 SS18L2Q9UHA2 77 aa13.24□□□□□ -0.29
PTP4A3-204ENST00000521578 LINC00483Q53H64 154 aa13.2□□□□□ -0.3
PTP4A3-204ENST00000521578 MYCBP2O75592 4640 aa13.2□□□□□ -0.3
PTP4A3-204ENST00000521578 DSCR10P59022 87 aa13.19□□□□□ -0.3
PTP4A3-204ENST00000521578 A0A087WSZ3 146 aa13.18□□□□□ -0.3
PTP4A3-204ENST00000521578 LRP1Q07954 4544 aaKnown RBP13.15□□□□□ -0.3
PTP4A3-204ENST00000521578 CYSTM1Q9H1C7 97 aa13.14□□□□□ -0.31
PTP4A3-204ENST00000521578 PCLOQ9Y6V0 5065 aa13.14□□□□□ -0.31
PTP4A3-204ENST00000521578 K7EQZ3 153 aa13.1□□□□□ -0.31
PTP4A3-204ENST00000521578 C20orf197Q8N268 126 aa13.09□□□□□ -0.31
PTP4A3-204ENST00000521578 FAT3Q8TDW7 4589 aa13.09□□□□□ -0.31
PTP4A3-204ENST00000521578 KRTAP1-4P0C5Y4 121 aa13.08□□□□□ -0.32
PTP4A3-204ENST00000521578 OCR1Q9BZK8 76 aa13.08□□□□□ -0.32
PTP4A3-204ENST00000521578 ANAPC11Q9NYG5 84 aa13.06□□□□□ -0.32
PTP4A3-204ENST00000521578 IGLV9-49A0A0B4J1Y8 123 aa13.05□□□□□ -0.32
PTP4A3-204ENST00000521578 LINC00472Q9H8W2 130 aa13.05□□□□□ -0.32
PTP4A3-204ENST00000521578 TMEM258P61165 79 aa13.04□□□□□ -0.32
PTP4A3-204ENST00000521578 KLKP1Q107X0 134 aa13.04□□□□□ -0.32
PTP4A3-204ENST00000521578 DEFB116Q30KQ4 102 aa13.03□□□□□ -0.32
PTP4A3-204ENST00000521578 HCG22E2RYF7 251 aa12.99□□□□□ -0.33
PTP4A3-204ENST00000521578 OXTP01178 125 aa12.99□□□□□ -0.33
PTP4A3-204ENST00000521578 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
PTP4A3-204ENST00000521578 KRTAP29-1A8MX34 341 aaPredicted RBP12.97□□□□□ -0.33
PTP4A3-204ENST00000521578 A0A087X002 238 aa12.96□□□□□ -0.33
PTP4A3-204ENST00000521578 FAM229BQ4G0N7 80 aa12.96□□□□□ -0.33
PTP4A3-204ENST00000521578 MOBPQ13875 183 aa12.96□□□□□ -0.34
PTP4A3-204ENST00000521578 A8MWP4 228 aa12.95□□□□□ -0.34
PTP4A3-204ENST00000521578 J3KT08 172 aa12.95□□□□□ -0.34
PTP4A3-204ENST00000521578 PRR15Q8IV56 129 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 730.3 ms