RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 DEFB1P60022 68 aa1.55□□□□□ -2.16
SKP1-208ENST00000521216 CEP350Q5VT06 3117 aa1.55□□□□□ -2.16
SKP1-208ENST00000521216 DEFB130BP0DP73 79 aa1.53□□□□□ -2.16
SKP1-208ENST00000521216 DEFB130AP0DP74 79 aa1.53□□□□□ -2.16
SKP1-208ENST00000521216 CNTRLQ7Z7A1 2325 aa1.53□□□□□ -2.16
SKP1-208ENST00000521216 DEFB123Q8N688 67 aa1.53□□□□□ -2.16
SKP1-208ENST00000521216 K7EIL1 84 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 LYNX1P0DP58 116 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 HTN1P15515 57 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 UBE2DNLQ8IWF7 75 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 MGAQ8IWI9 3026 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 WDR87Q6ZQQ6 2873 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
SKP1-208ENST00000521216 CUL9Q8IWT3 2517 aa1.51□□□□□ -2.17
SKP1-208ENST00000521216 DOPEY2Q9Y3R5 2298 aa1.51□□□□□ -2.17
SKP1-208ENST00000521216 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
SKP1-208ENST00000521216 BRWD1Q9NSI6 2320 aa1.51□□□□□ -2.17
SKP1-208ENST00000521216 CHD7Q9P2D1 2997 aa1.5□□□□□ -2.17
SKP1-208ENST00000521216 PRO0255Q9UI72 69 aa1.5□□□□□ -2.17
SKP1-208ENST00000521216 KNL1Q8NG31 2342 aa1.49□□□□□ -2.17
SKP1-208ENST00000521216 DEFB133Q30KQ1 61 aa1.48□□□□□ -2.17
SKP1-208ENST00000521216 LELP1Q5T871 98 aa1.48□□□□□ -2.17
SKP1-208ENST00000521216 NOP10Q9NPE3 64 aaKnown RBP1.48□□□□□ -2.17
SKP1-208ENST00000521216 ANKRD17O75179 2603 aaKnown RBP1.48□□□□□ -2.17
SKP1-208ENST00000521216 ZFHX2Q9C0A1 2572 aaPredicted RBP1.48□□□□□ -2.17
SKP1-208ENST00000521216 PLCE1Q9P212 2302 aa1.48□□□□□ -2.17
SKP1-208ENST00000521216 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
SKP1-208ENST00000521216 PRLHP81277 87 aa1.47□□□□□ -2.17
SKP1-208ENST00000521216 C10orf95Q9H7T3 257 aa1.47□□□□□ -2.17
SKP1-208ENST00000521216 CFAP54Q96N23 3096 aa1.46□□□□□ -2.18
SKP1-208ENST00000521216 SRCAPQ6ZRS2 3230 aa1.46□□□□□ -2.18
SKP1-208ENST00000521216 AHCTF1Q8WYP5 2266 aa1.45□□□□□ -2.18
SKP1-208ENST00000521216 CNOT1A5YKK6 2376 aaKnown RBP1.45□□□□□ -2.18
SKP1-208ENST00000521216 FLG2Q5D862 2391 aaPredicted RBP1.45□□□□□ -2.18
SKP1-208ENST00000521216 GOLGB1Q14789 3259 aaKnown RBP1.44□□□□□ -2.18
SKP1-208ENST00000521216 TNRC18O15417 2968 aaPredicted RBP1.44□□□□□ -2.18
SKP1-208ENST00000521216 ZZEF1O43149 2961 aa1.44□□□□□ -2.18
SKP1-208ENST00000521216 PCNTO95613 3336 aa1.43□□□□□ -2.18
SKP1-208ENST00000521216 S4R3F8 94 aa1.43□□□□□ -2.18
SKP1-208ENST00000521216 WNK2Q9Y3S1 2297 aa1.43□□□□□ -2.18
SKP1-208ENST00000521216 TENM2Q9NT68 2774 aa1.43□□□□□ -2.18
SKP1-208ENST00000521216 WNK1Q9H4A3 2382 aa1.43□□□□□ -2.18
SKP1-208ENST00000521216 ABCA1O95477 2261 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 OTOGQ6ZRI0 2925 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.42□□□□□ -2.183e-6■□□□□ 10.9
SKP1-208ENST00000521216 H3BNG1 76 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 CENPFP49454 3210 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 COL6A6A6NMZ7 2263 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 NBEAQ8NFP9 2946 aa1.42□□□□□ -2.18
SKP1-208ENST00000521216 SPINK1P00995 79 aa1.41□□□□□ -2.18
SKP1-208ENST00000521216 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
SKP1-208ENST00000521216 DEFB136Q30KP8 78 aa1.41□□□□□ -2.18
SKP1-208ENST00000521216 CELSR2Q9HCU4 2923 aa1.41□□□□□ -2.18
SKP1-208ENST00000521216 SPTBN1Q01082 2364 aaKnown RBP1.41□□□□□ -2.18
SKP1-208ENST00000521216 CACNA1EQ15878 2313 aa1.4□□□□□ -2.18
SKP1-208ENST00000521216 CACNA1BQ00975 2339 aa1.4□□□□□ -2.19
SKP1-208ENST00000521216 Q5VSD8 79 aa1.39□□□□□ -2.19
SKP1-208ENST00000521216 APLNQ9ULZ1 77 aa1.39□□□□□ -2.19
SKP1-208ENST00000521216 U3KQA8 63 aa1.39□□□□□ -2.19
SKP1-208ENST00000521216 ASH1LQ9NR48 2969 aaKnown RBP1.39□□□□□ -2.19
SKP1-208ENST00000521216 VPS13AQ96RL7 3174 aa1.39□□□□□ -2.19
SKP1-208ENST00000521216 LINC01556Q5JQF7 62 aa1.38□□□□□ -2.19
SKP1-208ENST00000521216 DEFB124Q8NES8 71 aa1.38□□□□□ -2.19
SKP1-208ENST00000521216 TPRP12270 2363 aaKnown RBP1.38□□□□□ -2.19
SKP1-208ENST00000521216 UTRNP46939 3433 aa1.37□□□□□ -2.19
SKP1-208ENST00000521216 RANBP2P49792 3224 aaKnown RBP1.37□□□□□ -2.19
SKP1-208ENST00000521216 CHD6Q8TD26 2715 aa1.37□□□□□ -2.19
SKP1-208ENST00000521216 A0A096LPF7 62 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 M0QZ58 72 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 PRUNE2Q8WUY3 3088 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 PCNX1Q96RV3 2341 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 CFAP47Q6ZTR5 3102 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 WDFY4Q6ZS81 3184 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 FRYLO94915 3013 aa1.36□□□□□ -2.19
SKP1-208ENST00000521216 BOD1L1Q8NFC6 3051 aa1.35□□□□□ -2.19
SKP1-208ENST00000521216 MKI67P46013 3256 aaKnown RBP1.35□□□□□ -2.19
SKP1-208ENST00000521216 PIEZO2Q9H5I5 2752 aa1.35□□□□□ -2.19
SKP1-208ENST00000521216 IGF2RP11717 2491 aa1.35□□□□□ -2.19
SKP1-208ENST00000521216 SPART-AS1P0CW21 52 aa1.34□□□□□ -2.19
SKP1-208ENST00000521216 ZDBF2Q9HCK1 2354 aa1.34□□□□□ -2.2
SKP1-208ENST00000521216 AKAP6Q13023 2319 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 TRIOO75962 3097 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 A0A096LNI7 61 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 A0A0D9SG42 100 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 SZT2Q5T011 3432 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 KALRNO60229 2985 aa1.33□□□□□ -2.2
SKP1-208ENST00000521216 SPINK6Q6UWN8 80 aa1.32□□□□□ -2.2
SKP1-208ENST00000521216 UNC80Q8N2C7 3258 aa1.32□□□□□ -2.2
SKP1-208ENST00000521216 DCHS1Q96JQ0 3298 aa1.32□□□□□ -2.2
SKP1-208ENST00000521216 CELSR1Q9NYQ6 3014 aa1.32□□□□□ -2.2
SKP1-208ENST00000521216 VWFP04275 2813 aa1.31□□□□□ -2.2
SKP1-208ENST00000521216 SPTBN5Q9NRC6 3674 aaKnown RBP1.31□□□□□ -2.2
SKP1-208ENST00000521216 ACACAQ13085 2346 aa1.31□□□□□ -2.2
SKP1-208ENST00000521216 REV3LO60673 3130 aa1.3□□□□□ -2.2
SKP1-208ENST00000521216 AKAP13Q12802 2813 aa1.3□□□□□ -2.2
SKP1-208ENST00000521216 SPTBN2O15020 2390 aa1.29□□□□□ -2.2
SKP1-208ENST00000521216 SPTBN4Q9H254 2564 aa1.29□□□□□ -2.2
SKP1-208ENST00000521216 DMXL1Q9Y485 3027 aa1.29□□□□□ -2.2
SKP1-208ENST00000521216 LRBAP50851 2863 aa1.28□□□□□ -2.2
SKP1-208ENST00000521216 FAM208BQ5VWN6 2430 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms