RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
POLB-208ENST00000520008 C3orf79P0CE67 100 aa6.22□□□□□ -1.41
POLB-208ENST00000520008 IFITM1P13164 125 aa6.21□□□□□ -1.42
POLB-208ENST00000520008 A4D1N5 150 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 M0R2T5 61 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 ANKRD39Q53RE8 183 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 SCGB1D4Q6XE38 83 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 Q6ZVH6 145 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 SLC7A5P1Q8MH63 180 aa6.2□□□□□ -1.42
POLB-208ENST00000520008 A6NDN8 102 aa6.19□□□□□ -1.42
POLB-208ENST00000520008 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
POLB-208ENST00000520008 TCL1BO95988 128 aa6.18□□□□□ -1.42
POLB-208ENST00000520008 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
POLB-208ENST00000520008 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
POLB-208ENST00000520008 SMIM11BQ8TCY0 68 aa6.18□□□□□ -1.42
POLB-208ENST00000520008 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
POLB-208ENST00000520008 COA6Q5JTJ3 125 aaKnown RBP6.17□□□□□ -1.42
POLB-208ENST00000520008 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
POLB-208ENST00000520008 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
POLB-208ENST00000520008 KRTDAPP60985 99 aa6.15□□□□□ -1.42
POLB-208ENST00000520008 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
POLB-208ENST00000520008 LINC00575Q6W349 94 aa6.13□□□□□ -1.43
POLB-208ENST00000520008 ATOH7Q8N100 152 aa6.13□□□□□ -1.43
POLB-208ENST00000520008 CLEC2BQ92478 149 aa6.13□□□□□ -1.43
POLB-208ENST00000520008 C20orf202A1L168 122 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 F8WEM9 126 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 Q6JHZ5 121 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 Q75L30 129 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 USH2AO75445 5202 aa6.12□□□□□ -1.43
POLB-208ENST00000520008 SSPOA2VEC9 5147 aa6.11□□□□□ -1.43
POLB-208ENST00000520008 Q6ZQY7 126 aa6.11□□□□□ -1.43
POLB-208ENST00000520008 OBSCN-AS1Q96MR7 158 aa6.1□□□□□ -1.43
POLB-208ENST00000520008 hADV29S1A0JD25 119 aa6.08□□□□□ -1.44
POLB-208ENST00000520008 VAMP3Q15836 100 aa6.08□□□□□ -1.44
POLB-208ENST00000520008 OCIAD2Q56VL3 154 aa6.08□□□□□ -1.44
POLB-208ENST00000520008 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
POLB-208ENST00000520008 SNRPEP62304 92 aaKnown RBP6.06□□□□□ -1.44
POLB-208ENST00000520008 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
POLB-208ENST00000520008 KRTAP4-11Q9BYQ6 195 aa6.06□□□□□ -1.44
POLB-208ENST00000520008 Q6Q795 121 aa6.05□□□□□ -1.44
POLB-208ENST00000520008 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.05□□□□□ -1.44
POLB-208ENST00000520008 PPDPFLQ8WWR9 84 aa6.05□□□□□ -1.44
POLB-208ENST00000520008 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
POLB-208ENST00000520008 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
POLB-208ENST00000520008 LST1O00453 97 aa6.02□□□□□ -1.45
POLB-208ENST00000520008 CFC1P0CG37 223 aa6.02□□□□□ -1.45
POLB-208ENST00000520008 A8MUU9 505 aa6.01□□□□□ -1.45
POLB-208ENST00000520008 H3BUT2 72 aa6.01□□□□□ -1.45
POLB-208ENST00000520008 BVES-AS1Q5T3Y7 98 aa6.01□□□□□ -1.45
POLB-208ENST00000520008 Q96NJ1 140 aa6.01□□□□□ -1.45
POLB-208ENST00000520008 SCGB1D1O95968 90 aa6□□□□□ -1.45
POLB-208ENST00000520008 SS18L2Q9UHA2 77 aa5.99□□□□□ -1.45
POLB-208ENST00000520008 C12orf57Q99622 126 aa5.98□□□□□ -1.45
POLB-208ENST00000520008 HIST1H2BLQ99880 126 aa5.98□□□□□ -1.45
POLB-208ENST00000520008 SNHG12Q9BXW3 62 aa5.98□□□□□ -1.45
POLB-208ENST00000520008 HIST3H2BBQ8N257 126 aa5.97□□□□□ -1.45
POLB-208ENST00000520008 TEN1Q86WV5 123 aa5.96□□□□□ -1.46
POLB-208ENST00000520008 HSBP1L1C9JCN9 74 aa5.95□□□□□ -1.46
POLB-208ENST00000520008 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
POLB-208ENST00000520008 A0A087WSZ3 146 aa5.94□□□□□ -1.46
POLB-208ENST00000520008 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
POLB-208ENST00000520008 MT2AP02795 61 aa5.94□□□□□ -1.46
POLB-208ENST00000520008 FAM218AQ96MZ4 157 aa5.94□□□□□ -1.46
POLB-208ENST00000520008 TRBV20-1A0A075B6N2 111 aa5.93□□□□□ -1.46
POLB-208ENST00000520008 HIST1H4GQ99525 98 aa5.93□□□□□ -1.46
POLB-208ENST00000520008 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
POLB-208ENST00000520008 COX8AP10176 69 aa5.91□□□□□ -1.46
POLB-208ENST00000520008 DSCR10P59022 87 aa5.91□□□□□ -1.46
POLB-208ENST00000520008 MPLKIPQ8TAP9 179 aa5.91□□□□□ -1.46
POLB-208ENST00000520008 H0YGX0 51 aa5.9□□□□□ -1.46
POLB-208ENST00000520008 H3BS24 57 aa5.9□□□□□ -1.46
POLB-208ENST00000520008 DLEU1O43261 78 aa5.9□□□□□ -1.46
POLB-208ENST00000520008 MT1FP04733 61 aa5.9□□□□□ -1.46
POLB-208ENST00000520008 S100A2P29034 98 aa5.9□□□□□ -1.46
POLB-208ENST00000520008 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
POLB-208ENST00000520008 A0A1W2PNM2 257 aa5.89□□□□□ -1.47
POLB-208ENST00000520008 H3BMG7 143 aa5.88□□□□□ -1.47
POLB-208ENST00000520008 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
POLB-208ENST00000520008 HRES1P13985 223 aa5.87□□□□□ -1.47
POLB-208ENST00000520008 A0A1B0GX51 115 aa5.86□□□□□ -1.47
POLB-208ENST00000520008 SNCGO76070 127 aa5.86□□□□□ -1.47
POLB-208ENST00000520008 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
POLB-208ENST00000520008 RAB37Q96AX2 223 aa5.86□□□□□ -1.47
POLB-208ENST00000520008 SIGMAR1Q99720 223 aa5.86□□□□□ -1.47
POLB-208ENST00000520008 LINC00313P59037 77 aa5.85□□□□□ -1.47
POLB-208ENST00000520008 HIGD1BQ9P298 99 aa5.85□□□□□ -1.47
POLB-208ENST00000520008 NOTCH2NLQ7Z3S9 236 aa5.84□□□□□ -1.47
POLB-208ENST00000520008 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
POLB-208ENST00000520008 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
POLB-208ENST00000520008 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
POLB-208ENST00000520008 C2orf91Q6ZV80 131 aa5.83□□□□□ -1.48
POLB-208ENST00000520008 TRBV7-4A0A0J9YYF1 115 aa5.82□□□□□ -1.48
POLB-208ENST00000520008 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
POLB-208ENST00000520008 FABP2P12104 132 aa5.82□□□□□ -1.48
POLB-208ENST00000520008 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
POLB-208ENST00000520008 S100A6P06703 90 aa5.81□□□□□ -1.48
POLB-208ENST00000520008 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
POLB-208ENST00000520008 RBM12B-AS1Q9P1G2 102 aa5.81□□□□□ -1.48
POLB-208ENST00000520008 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms