RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 DEFB119Q8N690 84 aa2.63□□□□□ -1.99
SQLE-203ENST00000518931 PIEZO1Q92508 2521 aa2.63□□□□□ -1.99
SQLE-203ENST00000518931 AHCTF1Q8WYP5 2266 aa2.62□□□□□ -1.99
SQLE-203ENST00000518931 CHD8Q9HCK8 2581 aa2.61□□□□□ -1.99
SQLE-203ENST00000518931 DEFB130BP0DP73 79 aa2.61□□□□□ -1.99
SQLE-203ENST00000518931 DEFB130AP0DP74 79 aa2.61□□□□□ -1.99
SQLE-203ENST00000518931 NOP10Q9NPE3 64 aaKnown RBP2.61□□□□□ -1.99
SQLE-203ENST00000518931 LYNX1P0DP58 116 aa2.6□□□□□ -1.99
SQLE-203ENST00000518931 BAHCC1Q9P281 2608 aa2.6□□□□□ -1.99
SQLE-203ENST00000518931 COL6A3P12111 3177 aa2.59□□□□□ -2
SQLE-203ENST00000518931 K7EIL1 84 aa2.58□□□□□ -2
SQLE-203ENST00000518931 WNK2Q9Y3S1 2297 aa2.58□□□□□ -2
SQLE-203ENST00000518931 PRO0255Q9UI72 69 aa2.57□□□□□ -2
SQLE-203ENST00000518931 U3KQA8 63 aa2.57□□□□□ -2
SQLE-203ENST00000518931 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
SQLE-203ENST00000518931 ANKRD17O75179 2603 aaKnown RBP2.55□□□□□ -2
SQLE-203ENST00000518931 SZT2Q5T011 3432 aa2.55□□□□□ -2
SQLE-203ENST00000518931 TRIOBPQ9H2D6 2365 aa2.54□□□□□ -2
SQLE-203ENST00000518931 WNK1Q9H4A3 2382 aa2.54□□□□□ -2
SQLE-203ENST00000518931 CACNA1BQ00975 2339 aa2.54□□□□□ -2
SQLE-203ENST00000518931 DEFB136Q30KP8 78 aa2.54□□□□□ -2
SQLE-203ENST00000518931 LELP1Q5T871 98 aa2.54□□□□□ -2
SQLE-203ENST00000518931 SPTBN1Q01082 2364 aaKnown RBP2.54□□□□□ -2
SQLE-203ENST00000518931 TTC28Q96AY4 2481 aa2.53□□□□□ -2
SQLE-203ENST00000518931 UNC80Q8N2C7 3258 aa2.53□□□□□ -2
SQLE-203ENST00000518931 CNOT1A5YKK6 2376 aaKnown RBP2.52□□□□□ -2.01
SQLE-203ENST00000518931 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.52□□□□□ -2.012e-9■■■■□ 26.5
SQLE-203ENST00000518931 VCANP13611 3396 aa2.52□□□□□ -2.01
SQLE-203ENST00000518931 WDR87Q6ZQQ6 2873 aa2.51□□□□□ -2.01
SQLE-203ENST00000518931 PRLHP81277 87 aa2.51□□□□□ -2.01
SQLE-203ENST00000518931 DEFB123Q8N688 67 aa2.51□□□□□ -2.01
SQLE-203ENST00000518931 MGAQ8IWI9 3026 aa2.51□□□□□ -2.01
SQLE-203ENST00000518931 BDP1A6H8Y1 2624 aa2.5□□□□□ -2.01
SQLE-203ENST00000518931 SPTBN5Q9NRC6 3674 aaKnown RBP2.49□□□□□ -2.01
SQLE-203ENST00000518931 COL6A6A6NMZ7 2263 aa2.49□□□□□ -2.01
SQLE-203ENST00000518931 TRANK1O15050 2925 aa2.49□□□□□ -2.01
SQLE-203ENST00000518931 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
SQLE-203ENST00000518931 MAST4O15021 2626 aa2.48□□□□□ -2.01
SQLE-203ENST00000518931 SPINK1P00995 79 aa2.47□□□□□ -2.01
SQLE-203ENST00000518931 MUC6Q6W4X9 2439 aa2.47□□□□□ -2.01
SQLE-203ENST00000518931 MUC3AQ02505 3323 aa2.46□□□□□ -2.02
SQLE-203ENST00000518931 EPG5Q9HCE0 2579 aa2.46□□□□□ -2.02
SQLE-203ENST00000518931 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
SQLE-203ENST00000518931 ZDBF2Q9HCK1 2354 aa2.46□□□□□ -2.02
SQLE-203ENST00000518931 ANKRD11Q6UB99 2663 aaPredicted RBP2.45□□□□□ -2.02
SQLE-203ENST00000518931 CHD7Q9P2D1 2997 aa2.45□□□□□ -2.02
SQLE-203ENST00000518931 CACNA1EQ15878 2313 aa2.45□□□□□ -2.02
SQLE-203ENST00000518931 A0A096LPF7 62 aa2.45□□□□□ -2.02
SQLE-203ENST00000518931 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SQLE-203ENST00000518931 FASNP49327 2511 aaKnown RBP2.45□□□□□ -2.02
SQLE-203ENST00000518931 FLG2Q5D862 2391 aaPredicted RBP2.45□□□□□ -2.02
SQLE-203ENST00000518931 MKI67P46013 3256 aaKnown RBP2.44□□□□□ -2.02
SQLE-203ENST00000518931 FLNBO75369 2602 aaKnown RBP2.44□□□□□ -2.02
SQLE-203ENST00000518931 SETXQ7Z333 2677 aaKnown RBP2.44□□□□□ -2.02
SQLE-203ENST00000518931 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SQLE-203ENST00000518931 RANBP2P49792 3224 aaKnown RBP2.44□□□□□ -2.02
SQLE-203ENST00000518931 CEP290O15078 2479 aa2.43□□□□□ -2.02
SQLE-203ENST00000518931 S4R3F8 94 aa2.43□□□□□ -2.02
SQLE-203ENST00000518931 ZFHX4Q86UP3 3567 aa2.43□□□□□ -2.02
SQLE-203ENST00000518931 LAMA2P24043 3122 aaKnown RBP2.43□□□□□ -2.02
SQLE-203ENST00000518931 ZNF462Q96JM2 2506 aa2.42□□□□□ -2.02
SQLE-203ENST00000518931 EYSQ5T1H1 3165 aa2.42□□□□□ -2.02
SQLE-203ENST00000518931 CENPFP49454 3210 aa2.42□□□□□ -2.02
SQLE-203ENST00000518931 LAMA3Q16787 3333 aa2.41□□□□□ -2.02
SQLE-203ENST00000518931 PCNX1Q96RV3 2341 aa2.41□□□□□ -2.02
SQLE-203ENST00000518931 NAV2Q8IVL1 2488 aa2.41□□□□□ -2.02
SQLE-203ENST00000518931 IGF2RP11717 2491 aa2.4□□□□□ -2.03
SQLE-203ENST00000518931 TPRP12270 2363 aaKnown RBP2.39□□□□□ -2.03
SQLE-203ENST00000518931 USP9XQ93008 2570 aaPredicted RBP2.39□□□□□ -2.03
SQLE-203ENST00000518931 H3BNG1 76 aa2.39□□□□□ -2.03
SQLE-203ENST00000518931 ASH1LQ9NR48 2969 aaKnown RBP2.39□□□□□ -2.03
SQLE-203ENST00000518931 FAM208BQ5VWN6 2430 aa2.39□□□□□ -2.03
SQLE-203ENST00000518931 CHD6Q8TD26 2715 aa2.39□□□□□ -2.03
SQLE-203ENST00000518931 BRCA2P51587 3418 aa2.39□□□□□ -2.03
SQLE-203ENST00000518931 A0A096LNI7 61 aa2.38□□□□□ -2.03
SQLE-203ENST00000518931 APLNQ9ULZ1 77 aa2.38□□□□□ -2.03
SQLE-203ENST00000518931 CFAP47Q6ZTR5 3102 aa2.38□□□□□ -2.03
SQLE-203ENST00000518931 NCOR1O75376 2440 aa2.38□□□□□ -2.03
SQLE-203ENST00000518931 PTPN13Q12923 2485 aa2.37□□□□□ -2.03
SQLE-203ENST00000518931 ZZEF1O43149 2961 aa2.37□□□□□ -2.03
SQLE-203ENST00000518931 FBN1P35555 2871 aaKnown RBP2.37□□□□□ -2.03
SQLE-203ENST00000518931 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
SQLE-203ENST00000518931 LINC01556Q5JQF7 62 aa2.36□□□□□ -2.03
SQLE-203ENST00000518931 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
SQLE-203ENST00000518931 SPTBN2O15020 2390 aa2.36□□□□□ -2.03
SQLE-203ENST00000518931 ACACBO00763 2458 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 PRUNE2Q8WUY3 3088 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 AKAP6Q13023 2319 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 ACACAQ13085 2346 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 CFAP54Q96N23 3096 aa2.35□□□□□ -2.03
SQLE-203ENST00000518931 ZNF292O60281 2723 aa2.34□□□□□ -2.03
SQLE-203ENST00000518931 C5orf42Q9H799 3197 aa2.34□□□□□ -2.03
SQLE-203ENST00000518931 SPTBN4Q9H254 2564 aa2.34□□□□□ -2.04
SQLE-203ENST00000518931 PKDREJQ9NTG1 2253 aa2.34□□□□□ -2.04
SQLE-203ENST00000518931 REV3LO60673 3130 aa2.33□□□□□ -2.04
SQLE-203ENST00000518931 A0A0D9SG42 100 aa2.33□□□□□ -2.04
SQLE-203ENST00000518931 SPART-AS1P0CW21 52 aa2.33□□□□□ -2.04
SQLE-203ENST00000518931 SPINK6Q6UWN8 80 aa2.33□□□□□ -2.04
SQLE-203ENST00000518931 NCOR2Q9Y618 2525 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms