RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 LINC00336Q6ZUF6 198 aa3.32□□□□□ -1.88
SCARNA20.4-201ENST00000516969 C3orf22Q8N5N4 141 aa3.32□□□□□ -1.88
SCARNA20.4-201ENST00000516969 HIGD2AQ9BW72 106 aa3.32□□□□□ -1.88
SCARNA20.4-201ENST00000516969 VPS13BQ7Z7G8 4022 aa3.31□□□□□ -1.88
SCARNA20.4-201ENST00000516969 A0A1B0GW54 56 aa3.31□□□□□ -1.88
SCARNA20.4-201ENST00000516969 Q6JHZ5 121 aa3.31□□□□□ -1.88
SCARNA20.4-201ENST00000516969 CIRBP-AS1Q8TBR5 109 aa3.31□□□□□ -1.88
SCARNA20.4-201ENST00000516969 IMUPQ9GZP8 106 aa3.31□□□□□ -1.88
SCARNA20.4-201ENST00000516969 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 ZNF861PO60384 105 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 LINC00483Q53H64 154 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 C1orf137Q5JT78 98 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 SCXQ7RTU7 201 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
SCARNA20.4-201ENST00000516969 A0A1B0GVY2 172 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 IGFL1Q6UW32 110 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 Q6ZVQ6 151 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 Q8NBF4 154 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 UBL5Q9BZL1 73 aa3.29□□□□□ -1.88
SCARNA20.4-201ENST00000516969 F8WEM9 126 aa3.28□□□□□ -1.88
SCARNA20.4-201ENST00000516969 CRYGAP11844 174 aa3.28□□□□□ -1.88
SCARNA20.4-201ENST00000516969 PCP4P48539 62 aa3.28□□□□□ -1.88
SCARNA20.4-201ENST00000516969 ATP5EP2Q5VTU8 51 aa3.28□□□□□ -1.88
SCARNA20.4-201ENST00000516969 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
SCARNA20.4-201ENST00000516969 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
SCARNA20.4-201ENST00000516969 LRP1BQ9NZR2 4599 aa3.27□□□□□ -1.89
SCARNA20.4-201ENST00000516969 A0A0G2JQZ4 141 aa3.26□□□□□ -1.89
SCARNA20.4-201ENST00000516969 RPL37AP61513 92 aaKnown RBP3.26□□□□□ -1.89
SCARNA20.4-201ENST00000516969 CXCL6P80162 114 aa3.26□□□□□ -1.89
SCARNA20.4-201ENST00000516969 HIST1H4AP62805 103 aaKnown RBP3.25□□□□□ -1.89
SCARNA20.4-201ENST00000516969 HAMPP81172 84 aa3.25□□□□□ -1.89
SCARNA20.4-201ENST00000516969 NREPQ16612 68 aa3.25□□□□□ -1.89
SCARNA20.4-201ENST00000516969 KMT2CQ8NEZ4 4911 aaKnown RBP3.25□□□□□ -1.89
SCARNA20.4-201ENST00000516969 ANAPC11Q9NYG5 84 aa3.24□□□□□ -1.89
SCARNA20.4-201ENST00000516969 RYR2Q92736 4967 aa3.24□□□□□ -1.89
SCARNA20.4-201ENST00000516969 FAM236AA0A1B0GUQ0 79 aa3.23□□□□□ -1.89
SCARNA20.4-201ENST00000516969 FAM236BA0A1B0GV22 79 aa3.23□□□□□ -1.89
SCARNA20.4-201ENST00000516969 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
SCARNA20.4-201ENST00000516969 A0A087WSZ3 146 aa3.22□□□□□ -1.89
SCARNA20.4-201ENST00000516969 A0A087WVE0 104 aa3.22□□□□□ -1.89
SCARNA20.4-201ENST00000516969 IGLV9-49A0A0B4J1Y8 123 aa3.22□□□□□ -1.89
SCARNA20.4-201ENST00000516969 BPY2O14599 106 aa3.22□□□□□ -1.89
SCARNA20.4-201ENST00000516969 APOBP04114 4563 aaKnown RBP3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 IGKV4-1P06312 121 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 KRTAP1-4P0C5Y4 121 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 DSCR10P59022 87 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 MOBPQ13875 183 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 FAM229BQ4G0N7 80 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 C9orf153Q5TBE3 101 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 ANAPC13Q9BS18 74 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 LINC00472Q9H8W2 130 aa3.21□□□□□ -1.9
SCARNA20.4-201ENST00000516969 KRTAP10-4P60372 401 aaPredicted RBP3.2□□□□□ -1.9
SCARNA20.4-201ENST00000516969 CD164Q04900 197 aa3.2□□□□□ -1.9
SCARNA20.4-201ENST00000516969 A0A087X002 238 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 ATOX1O00244 68 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 KRTAP13-2Q52LG2 175 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 SPINK6Q6UWN8 80 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 Q8N9L7 120 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 Q96NJ1 140 aa3.19□□□□□ -1.9
SCARNA20.4-201ENST00000516969 PKHD1L1Q86WI1 4243 aa3.18□□□□□ -1.9
SCARNA20.4-201ENST00000516969 K7EQZ3 153 aa3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 PLA2G1BP04054 148 aaKnown RBP3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 DEFB116Q30KQ4 102 aa3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 HRCT1Q6UXD1 115 aa3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 SS18L2Q9UHA2 77 aa3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 FAT1Q14517 4588 aa3.17□□□□□ -1.9
SCARNA20.4-201ENST00000516969 HSPG2P98160 4391 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 A8MWP4 228 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 CCDC179H3BU77 68 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 J3KT08 172 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 COX7CP15954 63 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 ASB16-AS1Q495Z4 193 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 Q5XG85 94 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 PRR15Q8IV56 129 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 SERP2Q8N6R1 65 aa3.16□□□□□ -1.9
SCARNA20.4-201ENST00000516969 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
SCARNA20.4-201ENST00000516969 UQCRQO14949 82 aa3.15□□□□□ -1.91
SCARNA20.4-201ENST00000516969 CDK2AP2O75956 126 aa3.15□□□□□ -1.91
SCARNA20.4-201ENST00000516969 SMIM20Q8N5G0 67 aa3.15□□□□□ -1.91
SCARNA20.4-201ENST00000516969 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
SCARNA20.4-201ENST00000516969 HCG22E2RYF7 251 aa3.14□□□□□ -1.91
SCARNA20.4-201ENST00000516969 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
SCARNA20.4-201ENST00000516969 RYR3Q15413 4870 aa3.13□□□□□ -1.91
SCARNA20.4-201ENST00000516969 NDUFB1O75438 58 aa3.12□□□□□ -1.91
SCARNA20.4-201ENST00000516969 PRR26Q8N8Z3 221 aa3.12□□□□□ -1.91
SCARNA20.4-201ENST00000516969 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
SCARNA20.4-201ENST00000516969 MMP24-AS1A0A0U1RRL7 71 aa3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 A0A1B0GVX0 72 aa3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 FAM229AH3BQW9 127 aa3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 SPINK1P00995 79 aa3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 RPS29P62273 56 aaKnown RBP3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 C1orf195Q5TG92 126 aa3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 FLG2Q5D862 2391 aaPredicted RBP3.11□□□□□ -1.91
SCARNA20.4-201ENST00000516969 C4orf48Q5BLP8 95 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 CASC2Q6XLA1 102 aa3.1□□□□□ -1.91
SCARNA20.4-201ENST00000516969 WFDC13Q8IUB5 93 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms