RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KCNQ1DNQ9H478 68 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
CAST-242ENST00000515063 IGKV3D-7A0A0C4DH55 119 aa2.37□□□□□ -2.03
CAST-242ENST00000515063 RPS28P62857 69 aaKnown RBP2.37□□□□□ -2.03
CAST-242ENST00000515063 TM2D3Q9BRN9 247 aa2.37□□□□□ -2.03
CAST-242ENST00000515063 SS18L2Q9UHA2 77 aa2.37□□□□□ -2.03
CAST-242ENST00000515063 OTOGQ6ZRI0 2925 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 ATRQ13535 2644 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 IGLV5-48A0A075B6I7 105 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 IGKV2D-24A0A075B6R9 120 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 LOC107984640A0A0U1RRK4 108 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 SPRR1AP35321 89 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 TMEM258P61165 79 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 C3orf56Q8N813 242 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 NKAPP1Q8N9T2 125 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 RETNQ9HD89 108 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 DNAH3Q8TD57 4116 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 HIVEP1P15822 2718 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 VWFP04275 2813 aa2.36□□□□□ -2.03
CAST-242ENST00000515063 FBN1P35555 2871 aaKnown RBP2.35□□□□□ -2.03
CAST-242ENST00000515063 NBEAL2Q6ZNJ1 2754 aa2.35□□□□□ -2.03
CAST-242ENST00000515063 STAB1Q9NY15 2570 aa2.35□□□□□ -2.03
CAST-242ENST00000515063 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
CAST-242ENST00000515063 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
CAST-242ENST00000515063 TENM1Q9UKZ4 2725 aa2.35□□□□□ -2.03
CAST-242ENST00000515063 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 A0A087WVE0 104 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 ERC2-IT1O76042 136 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 C7orf33Q8WU49 177 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 PKIGQ9Y2B9 76 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 LINC00588Q9Y4M8 146 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 V9GYY9 64 aa2.34□□□□□ -2.03
CAST-242ENST00000515063 CMYA5Q8N3K9 4069 aa2.34□□□□□ -2.04
CAST-242ENST00000515063 NOTCH1P46531 2555 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 J3KT08 172 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 NDUFC1O43677 76 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 HAMPP81172 84 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 KLKP1Q107X0 134 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 NREPQ16612 68 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 Q6ZRX8 168 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 FAM19A1Q7Z5A9 133 aa2.33□□□□□ -2.04
CAST-242ENST00000515063 ETDCA0A1B0GVM5 59 aa2.32□□□□□ -2.04
CAST-242ENST00000515063 K7EIL1 84 aa2.32□□□□□ -2.04
CAST-242ENST00000515063 M0R2N4 97 aa2.32□□□□□ -2.04
CAST-242ENST00000515063 FUSP35637 526 aaKnown RBP eCLIP2.32□□□□□ -2.04
CAST-242ENST00000515063 ATP5EP56381 51 aaPredicted RBP2.32□□□□□ -2.04
CAST-242ENST00000515063 CNBPP62633 177 aaKnown RBP2.32□□□□□ -2.04
CAST-242ENST00000515063 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
CAST-242ENST00000515063 SPRR4Q96PI1 79 aa2.32□□□□□ -2.04
CAST-242ENST00000515063 DNAH1Q9P2D7 4330 aa2.32□□□□□ -2.04
CAST-242ENST00000515063 C16orf90A8MZG2 172 aa2.31□□□□□ -2.04
CAST-242ENST00000515063 DPH3Q96FX2 82 aa2.31□□□□□ -2.04
CAST-242ENST00000515063 TRRAPQ9Y4A5 3859 aa2.31□□□□□ -2.04
CAST-242ENST00000515063 BPY2O14599 106 aa2.3□□□□□ -2.04
CAST-242ENST00000515063 IGKV4-1P06312 121 aa2.3□□□□□ -2.04
CAST-242ENST00000515063 C1orf137Q5JT78 98 aa2.3□□□□□ -2.04
CAST-242ENST00000515063 Q9BRP9 147 aa2.3□□□□□ -2.04
CAST-242ENST00000515063 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 HUWE1Q7Z6Z7 4374 aaKnown RBP2.29□□□□□ -2.04
CAST-242ENST00000515063 DYNC2H1Q8NCM8 4307 aaKnown RBP2.29□□□□□ -2.04
CAST-242ENST00000515063 FAM236DA0A1B0GTK5 79 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 A0A1W2PNM2 257 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 F8WEM9 126 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 H7BZZ5 65 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 FAM236CP0DP71 79 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 SPRR1BP22528 89 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 CASC10Q5T4H9 136 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 C20orf197Q8N268 126 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 LINC00474Q9P2X8 69 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 APLNQ9ULZ1 77 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 SERP1Q9Y6X1 66 aa2.29□□□□□ -2.04
CAST-242ENST00000515063 TENM3Q9P273 2699 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 ANK2Q01484 3957 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 LCE6AA0A183 80 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 PRB2P02812 416 aaPredicted RBP2.28□□□□□ -2.04
CAST-242ENST00000515063 UBE2BP63146 152 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 C5orf47Q569G3 176 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 FAM19A5Q7Z5A7 132 aaPredicted RBP2.28□□□□□ -2.04
CAST-242ENST00000515063 C9orf163Q8N9P6 203 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 DEFB105AQ8NG35 78 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 CYSTM1Q9H1C7 97 aa2.28□□□□□ -2.04
CAST-242ENST00000515063 NUPR2A6NF83 97 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 C3orf84H3BNL1 204 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 PSCAO43653 123 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 RPL37AP61513 92 aaKnown RBP2.27□□□□□ -2.05
CAST-242ENST00000515063 SCXQ7RTU7 201 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 UBE2DNLQ8IWF7 75 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 TMEM254Q8TBM7 123 aa2.27□□□□□ -2.05
CAST-242ENST00000515063 A0A096LNI7 61 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 A0A0U1RQV1 116 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 ST20-AS1Q8NBB2 130 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 COL6A5A8TX70 2615 aa2.26□□□□□ -2.05
CAST-242ENST00000515063 PKD1L1Q8TDX9 2849 aa2.25□□□□□ -2.05
CAST-242ENST00000515063 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms