RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 UBE2AP49459 152 aa5.62□□□□□ -1.51
NR1I3-230ENST00000511944 CIRBP-AS1Q8TBR5 109 aa5.62□□□□□ -1.51
NR1I3-230ENST00000511944 SMCR5Q8TEV8 140 aa5.62□□□□□ -1.51
NR1I3-230ENST00000511944 PDE6GP18545 87 aa5.61□□□□□ -1.51
NR1I3-230ENST00000511944 FUSP35637 526 aaKnown RBP eCLIP5.61□□□□□ -1.51
NR1I3-230ENST00000511944 SCXQ7RTU7 201 aa5.61□□□□□ -1.51
NR1I3-230ENST00000511944 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
NR1I3-230ENST00000511944 KMT2CQ8NEZ4 4911 aaKnown RBP5.6□□□□□ -1.51
NR1I3-230ENST00000511944 SPRR1BP22528 89 aa5.6□□□□□ -1.51
NR1I3-230ENST00000511944 PSORS1C2Q9UIG4 136 aa5.6□□□□□ -1.51
NR1I3-230ENST00000511944 DNAH5Q8TE73 4624 aa5.59□□□□□ -1.51
NR1I3-230ENST00000511944 TEX49A0A1B0GTD5 131 aa5.59□□□□□ -1.51
NR1I3-230ENST00000511944 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
NR1I3-230ENST00000511944 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
NR1I3-230ENST00000511944 PKD1P98161 4303 aa5.59□□□□□ -1.52
NR1I3-230ENST00000511944 ZNF861PO60384 105 aa5.58□□□□□ -1.52
NR1I3-230ENST00000511944 LINC01547P58512 204 aaPredicted RBP5.58□□□□□ -1.52
NR1I3-230ENST00000511944 PRLHP81277 87 aa5.58□□□□□ -1.52
NR1I3-230ENST00000511944 DNAH8Q96JB1 4490 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 LOC110117498A0A087WWA1 95 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 ACYP1P07311 99 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
NR1I3-230ENST00000511944 Q8N377 158 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 LAMTOR3Q9UHA4 124 aa5.57□□□□□ -1.52
NR1I3-230ENST00000511944 A0A1B0GW54 56 aa5.56□□□□□ -1.52
NR1I3-230ENST00000511944 ERC2-IT1O76042 136 aa5.56□□□□□ -1.52
NR1I3-230ENST00000511944 IGLV7-43P04211 117 aa5.56□□□□□ -1.52
NR1I3-230ENST00000511944 RBM3P98179 157 aaKnown RBP5.56□□□□□ -1.52
NR1I3-230ENST00000511944 C1orf137Q5JT78 98 aa5.56□□□□□ -1.52
NR1I3-230ENST00000511944 IGLV8-61A0A075B6I0 122 aa5.55□□□□□ -1.52
NR1I3-230ENST00000511944 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
NR1I3-230ENST00000511944 TRBV7-4A0A0J9YYF1 115 aa5.54□□□□□ -1.52
NR1I3-230ENST00000511944 F8WEM9 126 aa5.54□□□□□ -1.52
NR1I3-230ENST00000511944 RPL37AP61513 92 aaKnown RBP5.54□□□□□ -1.52
NR1I3-230ENST00000511944 DSCR8Q96T75 97 aa5.54□□□□□ -1.52
NR1I3-230ENST00000511944 ST20-AS1Q8NBB2 130 aa5.53□□□□□ -1.52
NR1I3-230ENST00000511944 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
NR1I3-230ENST00000511944 CDK2AP2O75956 126 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 CCKP06307 115 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 XGP55808 180 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 Q6ZQT0 140 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 C14orf132Q9NPU4 83 aa5.52□□□□□ -1.53
NR1I3-230ENST00000511944 Q6JHZ5 121 aa5.51□□□□□ -1.53
NR1I3-230ENST00000511944 DEFB105AQ8NG35 78 aa5.51□□□□□ -1.53
NR1I3-230ENST00000511944 PKHD1P08F94 4074 aa5.5□□□□□ -1.53
NR1I3-230ENST00000511944 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
NR1I3-230ENST00000511944 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
NR1I3-230ENST00000511944 RYR3Q15413 4870 aa5.48□□□□□ -1.53
NR1I3-230ENST00000511944 LRP1BQ9NZR2 4599 aa5.48□□□□□ -1.53
NR1I3-230ENST00000511944 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
NR1I3-230ENST00000511944 Q6Q795 121 aa5.48□□□□□ -1.53
NR1I3-230ENST00000511944 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
NR1I3-230ENST00000511944 C3orf22Q8N5N4 141 aa5.46□□□□□ -1.54
NR1I3-230ENST00000511944 Q8NBF4 154 aa5.46□□□□□ -1.54
NR1I3-230ENST00000511944 CRYGAP11844 174 aa5.44□□□□□ -1.54
NR1I3-230ENST00000511944 HAMPP81172 84 aa5.44□□□□□ -1.54
NR1I3-230ENST00000511944 ATP5EP2Q5VTU8 51 aa5.44□□□□□ -1.54
NR1I3-230ENST00000511944 UBL5Q9BZL1 73 aa5.44□□□□□ -1.54
NR1I3-230ENST00000511944 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
NR1I3-230ENST00000511944 IGFL1Q6UW32 110 aa5.43□□□□□ -1.54
NR1I3-230ENST00000511944 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
NR1I3-230ENST00000511944 LINC00643Q86TS7 51 aa5.43□□□□□ -1.54
NR1I3-230ENST00000511944 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
NR1I3-230ENST00000511944 A0A1B0GV72 72 aa5.42□□□□□ -1.54
NR1I3-230ENST00000511944 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
NR1I3-230ENST00000511944 CD164Q04900 197 aa5.42□□□□□ -1.54
NR1I3-230ENST00000511944 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
NR1I3-230ENST00000511944 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
NR1I3-230ENST00000511944 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
NR1I3-230ENST00000511944 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
NR1I3-230ENST00000511944 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
NR1I3-230ENST00000511944 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
NR1I3-230ENST00000511944 C9orf153Q5TBE3 101 aa5.39□□□□□ -1.55
NR1I3-230ENST00000511944 IGLV9-49A0A0B4J1Y8 123 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 CXCL6P80162 114 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 MOBPQ13875 183 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 Q6ZVQ6 151 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 SIGMAR1Q99720 223 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 SS18L2Q9UHA2 77 aa5.38□□□□□ -1.55
NR1I3-230ENST00000511944 SMR3BP02814 79 aaPredicted RBP5.37□□□□□ -1.55
NR1I3-230ENST00000511944 NREPQ16612 68 aa5.37□□□□□ -1.55
NR1I3-230ENST00000511944 Q5XG85 94 aa5.36□□□□□ -1.55
NR1I3-230ENST00000511944 RYR1P21817 5038 aa5.35□□□□□ -1.55
NR1I3-230ENST00000511944 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
NR1I3-230ENST00000511944 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
NR1I3-230ENST00000511944 A0A087X002 238 aa5.34□□□□□ -1.55
NR1I3-230ENST00000511944 ASB16-AS1Q495Z4 193 aa5.34□□□□□ -1.55
NR1I3-230ENST00000511944 Q5VSD8 79 aa5.34□□□□□ -1.55
NR1I3-230ENST00000511944 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
NR1I3-230ENST00000511944 A0A087WSZ3 146 aa5.33□□□□□ -1.56
NR1I3-230ENST00000511944 J3KT08 172 aa5.33□□□□□ -1.56
NR1I3-230ENST00000511944 SPAG11AQ6PDA7 123 aa5.33□□□□□ -1.56
NR1I3-230ENST00000511944 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
NR1I3-230ENST00000511944 MT-ATP8P03928 68 aa5.32□□□□□ -1.56
NR1I3-230ENST00000511944 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
NR1I3-230ENST00000511944 TYMSOSQ8TAI1 123 aa5.32□□□□□ -1.56
NR1I3-230ENST00000511944 BPY2O14599 106 aa5.31□□□□□ -1.56
NR1I3-230ENST00000511944 SPINK1P00995 79 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms