RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 OXTP01178 125 aa6.38□□□□□ -1.39
NEK1-206ENST00000510533 KRTAP1-5Q9BYS1 174 aa6.36□□□□□ -1.39
NEK1-206ENST00000510533 M0R2T5 61 aa6.36□□□□□ -1.39
NEK1-206ENST00000510533 H3BS24 57 aa6.34□□□□□ -1.39
NEK1-206ENST00000510533 R4GN34 69 aa6.33□□□□□ -1.4
NEK1-206ENST00000510533 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
NEK1-206ENST00000510533 HELZ2Q9BYK8 2649 aaKnown RBP6.3□□□□□ -1.4
NEK1-206ENST00000510533 Q6ZR54 194 aa6.3□□□□□ -1.4
NEK1-206ENST00000510533 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
NEK1-206ENST00000510533 ROMO1P60602 79 aa6.3□□□□□ -1.4
NEK1-206ENST00000510533 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
NEK1-206ENST00000510533 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
NEK1-206ENST00000510533 CEP350Q5VT06 3117 aa6.28□□□□□ -1.4
NEK1-206ENST00000510533 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
NEK1-206ENST00000510533 STAB1Q9NY15 2570 aa6.26□□□□□ -1.41
NEK1-206ENST00000510533 KRTAP10-1P60331 282 aa6.25□□□□□ -1.41
NEK1-206ENST00000510533 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
NEK1-206ENST00000510533 AKAP13Q12802 2813 aa6.25□□□□□ -1.41
NEK1-206ENST00000510533 CFAP46Q8IYW2 2715 aa6.25□□□□□ -1.41
NEK1-206ENST00000510533 KRTAP10-2P60368 255 aa6.23□□□□□ -1.41
NEK1-206ENST00000510533 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
NEK1-206ENST00000510533 CHD6Q8TD26 2715 aa6.22□□□□□ -1.41
NEK1-206ENST00000510533 Q5VSD8 79 aa6.21□□□□□ -1.41
NEK1-206ENST00000510533 M0QZ58 72 aa6.21□□□□□ -1.41
NEK1-206ENST00000510533 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
NEK1-206ENST00000510533 PANO1I0J062 215 aa6.21□□□□□ -1.42
NEK1-206ENST00000510533 CHD7Q9P2D1 2997 aa6.2□□□□□ -1.42
NEK1-206ENST00000510533 NBEAL1Q6ZS30 2694 aa6.2□□□□□ -1.42
NEK1-206ENST00000510533 CENPEQ02224 2701 aa6.2□□□□□ -1.42
NEK1-206ENST00000510533 C5orf42Q9H799 3197 aa6.19□□□□□ -1.42
NEK1-206ENST00000510533 SPATA8Q6RVD6 105 aa6.19□□□□□ -1.42
NEK1-206ENST00000510533 ADM2Q7Z4H4 148 aa6.15□□□□□ -1.42
NEK1-206ENST00000510533 A0A087X002 238 aa6.15□□□□□ -1.43
NEK1-206ENST00000510533 LCE6AA0A183 80 aa6.15□□□□□ -1.43
NEK1-206ENST00000510533 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
NEK1-206ENST00000510533 UNC79Q9P2D8 2635 aa6.13□□□□□ -1.43
NEK1-206ENST00000510533 TEX15Q9BXT5 2789 aa6.13□□□□□ -1.43
NEK1-206ENST00000510533 GCN1Q92616 2671 aaKnown RBP6.12□□□□□ -1.43
NEK1-206ENST00000510533 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
NEK1-206ENST00000510533 UTRNP46939 3433 aa6.1□□□□□ -1.43
NEK1-206ENST00000510533 TEP1Q99973 2627 aaKnown RBP6.09□□□□□ -1.43
NEK1-206ENST00000510533 CFAP54Q96N23 3096 aa6.09□□□□□ -1.43
NEK1-206ENST00000510533 CHD9Q3L8U1 2897 aa6.08□□□□□ -1.44
NEK1-206ENST00000510533 KRTAP11-1Q8IUC1 163 aa6.08□□□□□ -1.44
NEK1-206ENST00000510533 NOTCH1P46531 2555 aa6.08□□□□□ -1.44
NEK1-206ENST00000510533 A6NN06 94 aa6.07□□□□□ -1.44
NEK1-206ENST00000510533 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
NEK1-206ENST00000510533 MGAQ8IWI9 3026 aa6.05□□□□□ -1.44
NEK1-206ENST00000510533 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
NEK1-206ENST00000510533 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
NEK1-206ENST00000510533 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
NEK1-206ENST00000510533 COL6A5A8TX70 2615 aa6.02□□□□□ -1.45
NEK1-206ENST00000510533 A8MU10 97 aa6.02□□□□□ -1.45
NEK1-206ENST00000510533 A0A0C4DFX4 3053 aa6.01□□□□□ -1.45
NEK1-206ENST00000510533 PCNTO95613 3336 aa6.01□□□□□ -1.45
NEK1-206ENST00000510533 Q6ZRN7 208 aaPredicted RBP6.01□□□□□ -1.45
NEK1-206ENST00000510533 NBEAL2Q6ZNJ1 2754 aa6□□□□□ -1.45
NEK1-206ENST00000510533 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
NEK1-206ENST00000510533 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
NEK1-206ENST00000510533 STAB2Q8WWQ8 2551 aa5.97□□□□□ -1.45
NEK1-206ENST00000510533 ZNF292O60281 2723 aa5.97□□□□□ -1.45
NEK1-206ENST00000510533 KRTAP13-2Q52LG2 175 aa5.96□□□□□ -1.46
NEK1-206ENST00000510533 SETXQ7Z333 2677 aaKnown RBP5.96□□□□□ -1.46
NEK1-206ENST00000510533 A8MUU9 505 aa5.95□□□□□ -1.46
NEK1-206ENST00000510533 HTTP42858 3142 aa5.93□□□□□ -1.46
NEK1-206ENST00000510533 TRANK1O15050 2925 aa5.92□□□□□ -1.46
NEK1-206ENST00000510533 RANBP2P49792 3224 aaKnown RBP5.91□□□□□ -1.46
NEK1-206ENST00000510533 UBR5O95071 2799 aaPredicted RBP5.89□□□□□ -1.47
NEK1-206ENST00000510533 WDFY4Q6ZS81 3184 aa5.87□□□□□ -1.47
NEK1-206ENST00000510533 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
NEK1-206ENST00000510533 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
NEK1-206ENST00000510533 NSD1Q96L73 2696 aaPredicted RBP5.84□□□□□ -1.47
NEK1-206ENST00000510533 LAMA2P24043 3122 aaKnown RBP5.84□□□□□ -1.47
NEK1-206ENST00000510533 MAP1AP78559 2803 aaPredicted RBP5.84□□□□□ -1.47
NEK1-206ENST00000510533 MKI67P46013 3256 aaKnown RBP5.84□□□□□ -1.48
NEK1-206ENST00000510533 IGSF10Q6WRI0 2623 aa5.83□□□□□ -1.48
NEK1-206ENST00000510533 DSPP15924 2871 aaKnown RBP5.82□□□□□ -1.48
NEK1-206ENST00000510533 FRYQ5TBA9 3013 aa5.81□□□□□ -1.48
NEK1-206ENST00000510533 TRIOO75962 3097 aa5.81□□□□□ -1.48
NEK1-206ENST00000510533 LAMA3Q16787 3333 aa5.81□□□□□ -1.48
NEK1-206ENST00000510533 BAHCC1Q9P281 2608 aa5.8□□□□□ -1.48
NEK1-206ENST00000510533 TNP1P09430 55 aa5.78□□□□□ -1.48
NEK1-206ENST00000510533 ITPR2Q14571 2701 aa5.78□□□□□ -1.48
NEK1-206ENST00000510533 PRUNE2Q8WUY3 3088 aa5.74□□□□□ -1.49
NEK1-206ENST00000510533 ITPR1Q14643 2758 aa5.74□□□□□ -1.49
NEK1-206ENST00000510533 FREM2Q5SZK8 3169 aa5.71□□□□□ -1.49
NEK1-206ENST00000510533 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.49
NEK1-206ENST00000510533 VPS13AQ96RL7 3174 aa5.71□□□□□ -1.5
NEK1-206ENST00000510533 KALRNO60229 2985 aa5.7□□□□□ -1.5
NEK1-206ENST00000510533 APCP25054 2843 aa5.69□□□□□ -1.5
NEK1-206ENST00000510533 BRCA2P51587 3418 aa5.68□□□□□ -1.5
NEK1-206ENST00000510533 XIRP2A4UGR9 3374 aa5.67□□□□□ -1.5
NEK1-206ENST00000510533 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
NEK1-206ENST00000510533 PP632Q6XCG6 107 aa5.66□□□□□ -1.5
NEK1-206ENST00000510533 UTP20O75691 2785 aaKnown RBP5.65□□□□□ -1.51
NEK1-206ENST00000510533 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
NEK1-206ENST00000510533 TACC2O95359 2948 aa5.64□□□□□ -1.51
NEK1-206ENST00000510533 UNC80Q8N2C7 3258 aa5.63□□□□□ -1.51
NEK1-206ENST00000510533 H0YAA0 97 aa5.62□□□□□ -1.51
NEK1-206ENST00000510533 XP32Q5T750 250 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms