RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 K7EIL1 84 aa4.45□□□□□ -1.7
UBE2D3-224ENST00000508474 XIRP2A4UGR9 3374 aa4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 ANKRD11Q6UB99 2663 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 REV3LO60673 3130 aa4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 LINC00483Q53H64 154 aa4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 JMJD1CQ15652 2540 aa4.44□□□□□ -1.7
UBE2D3-224ENST00000508474 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
UBE2D3-224ENST00000508474 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
UBE2D3-224ENST00000508474 CHD8Q9HCK8 2581 aa4.43□□□□□ -1.7
UBE2D3-224ENST00000508474 F8P00451 2351 aa4.42□□□□□ -1.7
UBE2D3-224ENST00000508474 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
UBE2D3-224ENST00000508474 CEP295Q9C0D2 2601 aa4.41□□□□□ -1.7
UBE2D3-224ENST00000508474 PLAC8Q9NZF1 115 aa4.4□□□□□ -1.7
UBE2D3-224ENST00000508474 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
UBE2D3-224ENST00000508474 ZFYVE26Q68DK2 2539 aa4.4□□□□□ -1.71
UBE2D3-224ENST00000508474 MTORP42345 2549 aa4.39□□□□□ -1.71
UBE2D3-224ENST00000508474 A0A0C4DFX4 3053 aa4.39□□□□□ -1.71
UBE2D3-224ENST00000508474 KRTAP1-3Q8IUG1 177 aa4.39□□□□□ -1.71
UBE2D3-224ENST00000508474 LAMA1P25391 3075 aa4.38□□□□□ -1.71
UBE2D3-224ENST00000508474 DNAH14Q0VDD8 3507 aa4.38□□□□□ -1.71
UBE2D3-224ENST00000508474 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
UBE2D3-224ENST00000508474 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
UBE2D3-224ENST00000508474 PRRC2CQ9Y520 2896 aaKnown RBP4.36□□□□□ -1.71
UBE2D3-224ENST00000508474 S4R3F8 94 aa4.36□□□□□ -1.71
UBE2D3-224ENST00000508474 A8MU10 97 aa4.34□□□□□ -1.71
UBE2D3-224ENST00000508474 CAMK2N1Q7Z7J9 78 aa4.34□□□□□ -1.71
UBE2D3-224ENST00000508474 SPTBN5Q9NRC6 3674 aaKnown RBP4.34□□□□□ -1.72
UBE2D3-224ENST00000508474 TNRC18O15417 2968 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-224ENST00000508474 ADM2Q7Z4H4 148 aa4.33□□□□□ -1.72
UBE2D3-224ENST00000508474 POLQO75417 2590 aa4.33□□□□□ -1.72
UBE2D3-224ENST00000508474 VCANP13611 3396 aa4.32□□□□□ -1.72
UBE2D3-224ENST00000508474 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-224ENST00000508474 PANO1I0J062 215 aa4.31□□□□□ -1.72
UBE2D3-224ENST00000508474 VPS13AQ96RL7 3174 aa4.3□□□□□ -1.72
UBE2D3-224ENST00000508474 ACANP16112 2415 aa4.29□□□□□ -1.72
UBE2D3-224ENST00000508474 Q6ZSA8 131 aa4.29□□□□□ -1.72
UBE2D3-224ENST00000508474 COL6A3P12111 3177 aa4.28□□□□□ -1.72
UBE2D3-224ENST00000508474 SPTBN4Q9H254 2564 aa4.28□□□□□ -1.72
UBE2D3-224ENST00000508474 SPEGQ15772 3267 aa4.27□□□□□ -1.73
UBE2D3-224ENST00000508474 SMR3BP02814 79 aaPredicted RBP4.27□□□□□ -1.73
UBE2D3-224ENST00000508474 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
UBE2D3-224ENST00000508474 FRYLO94915 3013 aa4.25□□□□□ -1.73
UBE2D3-224ENST00000508474 R4GN34 69 aa4.25□□□□□ -1.73
UBE2D3-224ENST00000508474 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
UBE2D3-224ENST00000508474 WDFY4Q6ZS81 3184 aa4.24□□□□□ -1.73
UBE2D3-224ENST00000508474 KRTAP1-5Q9BYS1 174 aa4.24□□□□□ -1.73
UBE2D3-224ENST00000508474 ZNF292O60281 2723 aa4.23□□□□□ -1.73
UBE2D3-224ENST00000508474 ZFHX4Q86UP3 3567 aa4.22□□□□□ -1.73
UBE2D3-224ENST00000508474 A8MUU9 505 aa4.21□□□□□ -1.74
UBE2D3-224ENST00000508474 KRTAP11-1Q8IUC1 163 aa4.21□□□□□ -1.74
UBE2D3-224ENST00000508474 CFAP54Q96N23 3096 aa4.21□□□□□ -1.74
UBE2D3-224ENST00000508474 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
UBE2D3-224ENST00000508474 MGAQ8IWI9 3026 aa4.2□□□□□ -1.74
UBE2D3-224ENST00000508474 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
UBE2D3-224ENST00000508474 RELNP78509 3460 aa4.19□□□□□ -1.74
UBE2D3-224ENST00000508474 CELSR3Q9NYQ7 3312 aa4.19□□□□□ -1.74
UBE2D3-224ENST00000508474 EPG5Q9HCE0 2579 aa4.19□□□□□ -1.74
UBE2D3-224ENST00000508474 M0R2T5 61 aa4.18□□□□□ -1.74
UBE2D3-224ENST00000508474 M0QZ58 72 aa4.18□□□□□ -1.74
UBE2D3-224ENST00000508474 RPS29P62273 56 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-224ENST00000508474 KRTAP21-3Q3LHN1 58 aa4.18□□□□□ -1.74
UBE2D3-224ENST00000508474 AKAP13Q12802 2813 aa4.17□□□□□ -1.74
UBE2D3-224ENST00000508474 KRTAP13-1Q8IUC0 172 aa4.17□□□□□ -1.74
UBE2D3-224ENST00000508474 FREM2Q5SZK8 3169 aa4.15□□□□□ -1.75
UBE2D3-224ENST00000508474 DSPP15924 2871 aaKnown RBP4.15□□□□□ -1.75
UBE2D3-224ENST00000508474 C20orf166-AS1Q96NR2 134 aa4.14□□□□□ -1.75
UBE2D3-224ENST00000508474 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
UBE2D3-224ENST00000508474 FASNP49327 2511 aaKnown RBP4.12□□□□□ -1.75
UBE2D3-224ENST00000508474 BOD1L1Q8NFC6 3051 aa4.1□□□□□ -1.75
UBE2D3-224ENST00000508474 SPENQ96T58 3664 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-224ENST00000508474 DMXL1Q9Y485 3027 aa4.1□□□□□ -1.75
UBE2D3-224ENST00000508474 MUC3AQ02505 3323 aa4.1□□□□□ -1.75
UBE2D3-224ENST00000508474 FLNAP21333 2647 aaKnown RBP4.1□□□□□ -1.75
UBE2D3-224ENST00000508474 FRYQ5TBA9 3013 aa4.09□□□□□ -1.75
UBE2D3-224ENST00000508474 USP24Q9UPU5 2620 aa4.09□□□□□ -1.76
UBE2D3-224ENST00000508474 DMDP11532 3685 aa4.09□□□□□ -1.76
UBE2D3-224ENST00000508474 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
UBE2D3-224ENST00000508474 LOC400499M0QZD8 3231 aa4.07□□□□□ -1.76
UBE2D3-224ENST00000508474 NBEAQ8NFP9 2946 aa4.06□□□□□ -1.76
UBE2D3-224ENST00000508474 DMXL2Q8TDJ6 3036 aa4.06□□□□□ -1.76
UBE2D3-224ENST00000508474 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
UBE2D3-224ENST00000508474 Q6ZRN7 208 aaPredicted RBP4.05□□□□□ -1.76
UBE2D3-224ENST00000508474 WDFY3Q8IZQ1 3526 aa4.05□□□□□ -1.76
UBE2D3-224ENST00000508474 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
UBE2D3-224ENST00000508474 H0YAA0 97 aa4.04□□□□□ -1.76
UBE2D3-224ENST00000508474 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
UBE2D3-224ENST00000508474 ITPR3Q14573 2671 aa4.04□□□□□ -1.76
UBE2D3-224ENST00000508474 ATRQ13535 2644 aa4.04□□□□□ -1.76
UBE2D3-224ENST00000508474 PP632Q6XCG6 107 aa4.03□□□□□ -1.76
UBE2D3-224ENST00000508474 UNC79Q9P2D8 2635 aa4.03□□□□□ -1.76
UBE2D3-224ENST00000508474 ADGRG4Q8IZF6 3080 aa4.02□□□□□ -1.77
UBE2D3-224ENST00000508474 MGAM2Q2M2H8 2515 aa4.02□□□□□ -1.77
UBE2D3-224ENST00000508474 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
UBE2D3-224ENST00000508474 GCN1Q92616 2671 aaKnown RBP4.01□□□□□ -1.77
UBE2D3-224ENST00000508474 ATMQ13315 3056 aa4.01□□□□□ -1.77
UBE2D3-224ENST00000508474 BSNQ9UPA5 3926 aa4.01□□□□□ -1.77
UBE2D3-224ENST00000508474 CENPEQ02224 2701 aa4.01□□□□□ -1.77
UBE2D3-224ENST00000508474 P0C880 135 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms