RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 SLC25A20O43772 301 aa10.04□□□□□ -0.8
SMN1-204ENST00000506163 Q6ZQY7 126 aa10.04□□□□□ -0.8
SMN1-204ENST00000506163 TPRXLQ17RH7 258 aa10.03□□□□□ -0.8
SMN1-204ENST00000506163 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
SMN1-204ENST00000506163 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
SMN1-204ENST00000506163 LOC105371267A0A1B0GV96 52 aa10□□□□□ -0.81
SMN1-204ENST00000506163 PRO1933Q9H354 126 aa10□□□□□ -0.81
SMN1-204ENST00000506163 FAM218AQ96MZ4 157 aa9.99□□□□□ -0.81
SMN1-204ENST00000506163 HSD52Q0P140 79 aa9.99□□□□□ -0.81
SMN1-204ENST00000506163 UQCR10Q9UDW1 63 aa9.99□□□□□ -0.81
SMN1-204ENST00000506163 PRO1854Q9UHT4 67 aa9.99□□□□□ -0.81
SMN1-204ENST00000506163 KRTAP13-3Q3SY46 172 aa9.98□□□□□ -0.81
SMN1-204ENST00000506163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.97□□□□□ -0.81
SMN1-204ENST00000506163 MUC2Q02817 5179 aa9.96□□□□□ -0.81
SMN1-204ENST00000506163 K7ERJ3 54 aa9.96□□□□□ -0.82
SMN1-204ENST00000506163 CDIP1Q9H305 208 aa9.96□□□□□ -0.82
SMN1-204ENST00000506163 CD164Q04900 197 aa9.95□□□□□ -0.82
SMN1-204ENST00000506163 MUC17Q685J3 4493 aa9.93□□□□□ -0.82
SMN1-204ENST00000506163 H0YGX0 51 aa9.93□□□□□ -0.82
SMN1-204ENST00000506163 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
SMN1-204ENST00000506163 TRIAP1O43715 76 aa9.92□□□□□ -0.82
SMN1-204ENST00000506163 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
SMN1-204ENST00000506163 OCIAD2Q56VL3 154 aa9.9□□□□□ -0.83
SMN1-204ENST00000506163 LIMD2Q9BT23 127 aa9.9□□□□□ -0.83
SMN1-204ENST00000506163 F8WEM9 126 aa9.89□□□□□ -0.83
SMN1-204ENST00000506163 Q5XG85 94 aa9.89□□□□□ -0.83
SMN1-204ENST00000506163 IGFL1Q6UW32 110 aa9.88□□□□□ -0.83
SMN1-204ENST00000506163 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
SMN1-204ENST00000506163 PCP4P48539 62 aa9.87□□□□□ -0.83
SMN1-204ENST00000506163 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
SMN1-204ENST00000506163 SNHG12Q9BXW3 62 aa9.87□□□□□ -0.83
SMN1-204ENST00000506163 H3BUT2 72 aa9.85□□□□□ -0.83
SMN1-204ENST00000506163 A0A1B0GX51 115 aa9.84□□□□□ -0.83
SMN1-204ENST00000506163 C1orf195Q5TG92 126 aa9.84□□□□□ -0.83
SMN1-204ENST00000506163 Q6JHZ5 121 aa9.84□□□□□ -0.83
SMN1-204ENST00000506163 SMIM6P0DI80 62 aa9.83□□□□□ -0.84
SMN1-204ENST00000506163 SMCPP49901 116 aaPredicted RBP9.82□□□□□ -0.84
SMN1-204ENST00000506163 SNCGO76070 127 aa9.81□□□□□ -0.84
SMN1-204ENST00000506163 PSMB2P49721 201 aa9.81□□□□□ -0.84
SMN1-204ENST00000506163 NDUFV3P56181 108 aaKnown RBP9.81□□□□□ -0.84
SMN1-204ENST00000506163 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
SMN1-204ENST00000506163 XP32Q5T750 250 aa9.79□□□□□ -0.84
SMN1-204ENST00000506163 FABP2P12104 132 aa9.77□□□□□ -0.85
SMN1-204ENST00000506163 ASB16-AS1Q495Z4 193 aa9.76□□□□□ -0.85
SMN1-204ENST00000506163 C9orf92A6NGG3 77 aa9.75□□□□□ -0.85
SMN1-204ENST00000506163 TCL1BO95988 128 aa9.75□□□□□ -0.85
SMN1-204ENST00000506163 COX6CP09669 75 aa9.74□□□□□ -0.85
SMN1-204ENST00000506163 H3BMG7 143 aa9.73□□□□□ -0.85
SMN1-204ENST00000506163 KRTAP4-1Q9BYQ7 146 aa9.73□□□□□ -0.85
SMN1-204ENST00000506163 Q6Q795 121 aa9.72□□□□□ -0.85
SMN1-204ENST00000506163 ORMDL1Q9P0S3 153 aa9.72□□□□□ -0.85
SMN1-204ENST00000506163 DNAL4O96015 105 aa9.71□□□□□ -0.86
SMN1-204ENST00000506163 M0R143 59 aa9.7□□□□□ -0.86
SMN1-204ENST00000506163 SCGB1C2P0DMR2 95 aa9.7□□□□□ -0.86
SMN1-204ENST00000506163 LST1O00453 97 aa9.69□□□□□ -0.86
SMN1-204ENST00000506163 GHRHP01286 108 aa9.69□□□□□ -0.86
SMN1-204ENST00000506163 NAA38Q9BRA0 125 aaKnown RBP9.69□□□□□ -0.86
SMN1-204ENST00000506163 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
SMN1-204ENST00000506163 TEN1Q86WV5 123 aa9.68□□□□□ -0.86
SMN1-204ENST00000506163 A0A1B0GV72 72 aa9.67□□□□□ -0.86
SMN1-204ENST00000506163 A0A1W2PNM2 257 aa9.67□□□□□ -0.86
SMN1-204ENST00000506163 TRACP01848 142 aa9.67□□□□□ -0.86
SMN1-204ENST00000506163 FAT4Q6V0I7 4981 aa9.67□□□□□ -0.86
SMN1-204ENST00000506163 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
SMN1-204ENST00000506163 TSTD3H0UI37 97 aa9.65□□□□□ -0.87
SMN1-204ENST00000506163 A0A087WSZ3 146 aa9.64□□□□□ -0.87
SMN1-204ENST00000506163 H3BQ85 93 aa9.64□□□□□ -0.87
SMN1-204ENST00000506163 UBE2V1Q13404 147 aa9.62□□□□□ -0.87
SMN1-204ENST00000506163 ANKRD29Q8N6D5 301 aa9.61□□□□□ -0.87
SMN1-204ENST00000506163 PCOTHQ58A44 107 aa9.6□□□□□ -0.87
SMN1-204ENST00000506163 LCE2CQ5TA81 110 aa9.6□□□□□ -0.87
SMN1-204ENST00000506163 Q96NJ1 140 aa9.6□□□□□ -0.87
SMN1-204ENST00000506163 BAALC-AS2P0C853 105 aa9.59□□□□□ -0.87
SMN1-204ENST00000506163 BATFQ16520 125 aa9.59□□□□□ -0.87
SMN1-204ENST00000506163 SS18L2Q9UHA2 77 aa9.58□□□□□ -0.88
SMN1-204ENST00000506163 TRBV7-4A0A0J9YYF1 115 aa9.56□□□□□ -0.88
SMN1-204ENST00000506163 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
SMN1-204ENST00000506163 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
SMN1-204ENST00000506163 ATXN8Q156A1 80 aa9.54□□□□□ -0.88
SMN1-204ENST00000506163 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
SMN1-204ENST00000506163 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
SMN1-204ENST00000506163 CCKP06307 115 aa9.53□□□□□ -0.88
SMN1-204ENST00000506163 KRTAP4-8Q9BYQ9 185 aa9.53□□□□□ -0.88
SMN1-204ENST00000506163 RBM3P98179 157 aaKnown RBP9.52□□□□□ -0.89
SMN1-204ENST00000506163 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
SMN1-204ENST00000506163 C9orf118A6NHY6 69 aa9.48□□□□□ -0.89
SMN1-204ENST00000506163 LINC00472Q9H8W2 130 aa9.48□□□□□ -0.89
SMN1-204ENST00000506163 KRTAP19-2Q3LHN2 52 aa9.47□□□□□ -0.89
SMN1-204ENST00000506163 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
SMN1-204ENST00000506163 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.9
SMN1-204ENST00000506163 VPS25Q9BRG1 176 aa9.46□□□□□ -0.9
SMN1-204ENST00000506163 TRBV20-1A0A075B6N2 111 aa9.44□□□□□ -0.9
SMN1-204ENST00000506163 C9JAW5 83 aa9.43□□□□□ -0.9
SMN1-204ENST00000506163 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
SMN1-204ENST00000506163 Q75L30 129 aa9.43□□□□□ -0.9
SMN1-204ENST00000506163 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
SMN1-204ENST00000506163 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
SMN1-204ENST00000506163 DSCR10P59022 87 aa9.42□□□□□ -0.9
SMN1-204ENST00000506163 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
SMN1-204ENST00000506163 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms