RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PRO3102Q9H379 93 aa-0.45□□□□□ -2.48
CHD1-203ENST00000505657 PLXNC1O60486 1568 aa-0.45□□□□□ -2.48
CHD1-203ENST00000505657 RYR3Q15413 4870 aa-0.46□□□□□ -2.48
CHD1-203ENST00000505657 DMXL1Q9Y485 3027 aa-0.46□□□□□ -2.48
CHD1-203ENST00000505657 STARD9Q9P2P6 4700 aa-0.46□□□□□ -2.48
CHD1-203ENST00000505657 TJP1Q07157 1748 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 VPS13DQ5THJ4 4388 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 UMAD1C9J7I0 102 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 IFI6P09912 130 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 LINC00158P58513 81 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 DEFA5Q01523 94 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 KRTAP20-2Q3LI61 65 aa-0.47□□□□□ -2.48
CHD1-203ENST00000505657 ITSN1Q15811 1721 aa-0.47□□□□□ -2.49
CHD1-203ENST00000505657 CUBNO60494 3623 aa-0.48□□□□□ -2.49
CHD1-203ENST00000505657 WIZO95785 1651 aa-0.48□□□□□ -2.49
CHD1-203ENST00000505657 C3orf79P0CE67 100 aa-0.48□□□□□ -2.49
CHD1-203ENST00000505657 IFI27P40305 119 aaPredicted RBP-0.48□□□□□ -2.49
CHD1-203ENST00000505657 VPS13BQ7Z7G8 4022 aa-0.48□□□□□ -2.49
CHD1-203ENST00000505657 DOPEY1Q5JWR5 2465 aa-0.48□□□□□ -2.49
CHD1-203ENST00000505657 USH2AO75445 5202 aa-0.49□□□□□ -2.49
CHD1-203ENST00000505657 ADIRFQ15847 76 aa-0.49□□□□□ -2.49
CHD1-203ENST00000505657 ST20Q9HBF5 79 aa-0.49□□□□□ -2.49
CHD1-203ENST00000505657 TACC2O95359 2948 aa-0.49□□□□□ -2.49
CHD1-203ENST00000505657 KRTAP19-8Q3LI54 63 aa-0.5□□□□□ -2.49
CHD1-203ENST00000505657 GCN1Q92616 2671 aaKnown RBP-0.5□□□□□ -2.49
CHD1-203ENST00000505657 MED14O60244 1454 aa-0.5□□□□□ -2.49
CHD1-203ENST00000505657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.5□□□□□ -2.49
CHD1-203ENST00000505657 DCAF1Q9Y4B6 1507 aa-0.5□□□□□ -2.49
CHD1-203ENST00000505657 PKHD1L1Q86WI1 4243 aa-0.5□□□□□ -2.49
CHD1-203ENST00000505657 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.5□□□□□ -2.49
CHD1-203ENST00000505657 KALRNO60229 2985 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 A0A087WXM4 84 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 NDUFA4O00483 81 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 DEPDC5O75140 1603 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 HERC2O95714 4834 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 NREPQ16612 68 aa-0.51□□□□□ -2.49
CHD1-203ENST00000505657 FASNP49327 2511 aaKnown RBP-0.52□□□□□ -2.49
CHD1-203ENST00000505657 CCDC18Q5T9S5 1454 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 H0YAA0 97 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 H3BNG1 76 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 H3BUT2 72 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 ATP5EP2Q5VTU8 51 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 S100A13Q99584 98 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 APOBP04114 4563 aaKnown RBP-0.52□□□□□ -2.49
CHD1-203ENST00000505657 ANKRD36CQ5JPF3 1778 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 UBR4Q5T4S7 5183 aa-0.52□□□□□ -2.49
CHD1-203ENST00000505657 CEP290O15078 2479 aa-0.53□□□□□ -2.49
CHD1-203ENST00000505657 CCDC88BA6NC98 1476 aa-0.53□□□□□ -2.49
CHD1-203ENST00000505657 TEP1Q99973 2627 aaKnown RBP-0.53□□□□□ -2.49
CHD1-203ENST00000505657 SMIM13P0DJ93 91 aa-0.53□□□□□ -2.49
CHD1-203ENST00000505657 RYR1P21817 5038 aa-0.53□□□□□ -2.49
CHD1-203ENST00000505657 MUC17Q685J3 4493 aa-0.53□□□□□ -2.49
CHD1-203ENST00000505657 ANKRD11Q6UB99 2663 aaPredicted RBP-0.53□□□□□ -2.49
CHD1-203ENST00000505657 KIAA1109Q2LD37 5005 aa-0.54□□□□□ -2.5
CHD1-203ENST00000505657 ANK3Q12955 4377 aaKnown RBP-0.54□□□□□ -2.5
CHD1-203ENST00000505657 LCE6AA0A183 80 aa-0.54□□□□□ -2.5
CHD1-203ENST00000505657 LRRK2Q5S007 2527 aa-0.54□□□□□ -2.5
CHD1-203ENST00000505657 ERVK-7P63135 1459 aa-0.54□□□□□ -2.5
CHD1-203ENST00000505657 RNF213Q63HN8 5207 aa-0.55□□□□□ -2.5
CHD1-203ENST00000505657 HYDINQ4G0P3 5121 aa-0.55□□□□□ -2.5
CHD1-203ENST00000505657 MT4P47944 62 aa-0.55□□□□□ -2.5
CHD1-203ENST00000505657 DEFB121Q5J5C9 76 aa-0.55□□□□□ -2.5
CHD1-203ENST00000505657 KDM5DQ9BY66 1539 aa-0.55□□□□□ -2.5
CHD1-203ENST00000505657 DNAH11Q96DT5 4516 aa-0.56□□□□□ -2.5
CHD1-203ENST00000505657 BPTFQ12830 3046 aa-0.56□□□□□ -2.5
CHD1-203ENST00000505657 MTORP42345 2549 aa-0.57□□□□□ -2.5
CHD1-203ENST00000505657 CFAP74Q9C0B2 1584 aa-0.57□□□□□ -2.5
CHD1-203ENST00000505657 NRAPQ86VF7 1730 aa-0.57□□□□□ -2.5
CHD1-203ENST00000505657 PARP4Q9UKK3 1724 aaKnown RBP-0.57□□□□□ -2.5
CHD1-203ENST00000505657 ACACAQ13085 2346 aa-0.57□□□□□ -2.5
CHD1-203ENST00000505657 ZC3H13Q5T200 1668 aaKnown RBP-0.57□□□□□ -2.5
CHD1-203ENST00000505657 EPPK1P58107 5090 aaKnown RBP-0.57□□□□□ -2.5
CHD1-203ENST00000505657 ABCC1P33527 1531 aa-0.58□□□□□ -2.5
CHD1-203ENST00000505657 BVES-AS1Q5T3Y7 98 aa-0.58□□□□□ -2.5
CHD1-203ENST00000505657 ANKRD50Q9ULJ7 1429 aa-0.58□□□□□ -2.5
CHD1-203ENST00000505657 MYO18BQ8IUG5 2567 aa-0.58□□□□□ -2.5
CHD1-203ENST00000505657 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.59□□□□□ -2.5
CHD1-203ENST00000505657 DEFB130BP0DP73 79 aa-0.59□□□□□ -2.5
CHD1-203ENST00000505657 DEFB130AP0DP74 79 aa-0.59□□□□□ -2.5
CHD1-203ENST00000505657 IAPPP10997 89 aa-0.59□□□□□ -2.5
CHD1-203ENST00000505657 FAM186AA6NE01 2351 aa-0.6□□□□□ -2.5
CHD1-203ENST00000505657 PKD1L2Q7Z442 2459 aa-0.6□□□□□ -2.51
CHD1-203ENST00000505657 LYNX1G3V0Z9 82 aa-0.6□□□□□ -2.51
CHD1-203ENST00000505657 SPRR2FQ96RM1 72 aa-0.6□□□□□ -2.51
CHD1-203ENST00000505657 NBEAQ8NFP9 2946 aa-0.6□□□□□ -2.51
CHD1-203ENST00000505657 MAP3K1Q13233 1512 aa-0.6□□□□□ -2.51
CHD1-203ENST00000505657 RNF17Q9BXT8 1623 aaKnown RBP-0.6□□□□□ -2.51
CHD1-203ENST00000505657 ARHGAP35Q9NRY4 1499 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 LAMA1P25391 3075 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 LRRIQ1Q96JM4 1722 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 C9orf92A6NGG3 77 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 MT1AP04731 61 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 CCDC168Q8NDH2 2452 aa-0.61□□□□□ -2.51
CHD1-203ENST00000505657 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
CHD1-203ENST00000505657 DNAH1Q9P2D7 4330 aa-0.62□□□□□ -2.51
CHD1-203ENST00000505657 HMGA1P17096 107 aaKnown RBP-0.62□□□□□ -2.51
CHD1-203ENST00000505657 PRLHP81277 87 aa-0.62□□□□□ -2.51
CHD1-203ENST00000505657 SACSQ9NZJ4 4579 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms