RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 SPANXCQ9NY87 97 aa3.08□□□□□ -1.92
GYPB-205ENST00000505583 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
GYPB-205ENST00000505583 COX7BP24311 80 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 NDUFA5Q16718 116 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 Q5XG85 94 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 SLC25A34Q6PIV7 304 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 SPANXDQ9BXN6 97 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 PRO1933Q9H354 126 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 HSPB8Q9UJY1 196 aa3.07□□□□□ -1.92
GYPB-205ENST00000505583 TEX49A0A1B0GTD5 131 aa3.06□□□□□ -1.92
GYPB-205ENST00000505583 AKR1D1P51857 326 aa3.06□□□□□ -1.92
GYPB-205ENST00000505583 IGLV5-48A0A075B6I7 105 aa3.05□□□□□ -1.92
GYPB-205ENST00000505583 SYS1-DBNDD2H3BUS1 97 aa3.05□□□□□ -1.92
GYPB-205ENST00000505583 TIMM17BO60830 172 aa3.05□□□□□ -1.92
GYPB-205ENST00000505583 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
GYPB-205ENST00000505583 COLCA2A8K830 154 aa3.04□□□□□ -1.92
GYPB-205ENST00000505583 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
GYPB-205ENST00000505583 USH2AO75445 5202 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 TRBV7-6A0A0J9YX20 115 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 A0A1B0GWB2 263 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 Q6Q795 121 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 PRAC1Q96KF2 57 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
GYPB-205ENST00000505583 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
GYPB-205ENST00000505583 A6NDN8 102 aa3.02□□□□□ -1.93
GYPB-205ENST00000505583 IGKV2D-30A0A075B6S6 120 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BKO60814 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BJP06899 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BOP23527 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BBP33778 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BDP58876 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BCP62807 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST2H2BEQ16778 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.01□□□□□ -1.93
GYPB-205ENST00000505583 SMIM11BQ8TCY0 68 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BHQ93079 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 OBSCN-AS1Q96MR7 158 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BNQ99877 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 HIST1H2BMQ99879 126 aa3.01□□□□□ -1.93
GYPB-205ENST00000505583 TCL1BO95988 128 aa3□□□□□ -1.93
GYPB-205ENST00000505583 C3orf79P0CE67 100 aa3□□□□□ -1.93
GYPB-205ENST00000505583 IGFL1Q6UW32 110 aa3□□□□□ -1.93
GYPB-205ENST00000505583 PCP2Q8IVA1 136 aa3□□□□□ -1.93
GYPB-205ENST00000505583 MUSTN1Q8IVN3 82 aa3□□□□□ -1.93
GYPB-205ENST00000505583 SLC7A5P1Q8MH63 180 aa3□□□□□ -1.93
GYPB-205ENST00000505583 TRBV7-7A0A0K0K1E9 115 aa2.99□□□□□ -1.93
GYPB-205ENST00000505583 S100A1P23297 94 aa2.99□□□□□ -1.93
GYPB-205ENST00000505583 SCGB1D4Q6XE38 83 aa2.99□□□□□ -1.93
GYPB-205ENST00000505583 ATOH7Q8N100 152 aa2.99□□□□□ -1.93
GYPB-205ENST00000505583 IFITM1P13164 125 aa2.98□□□□□ -1.93
GYPB-205ENST00000505583 KRTDAPP60985 99 aa2.98□□□□□ -1.93
GYPB-205ENST00000505583 ATP11AUNQ6ZP68 121 aa2.98□□□□□ -1.93
GYPB-205ENST00000505583 Q6ZQY7 126 aa2.98□□□□□ -1.93
GYPB-205ENST00000505583 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
GYPB-205ENST00000505583 MT2AP02795 61 aa2.97□□□□□ -1.93
GYPB-205ENST00000505583 CFC1P0CG37 223 aa2.97□□□□□ -1.93
GYPB-205ENST00000505583 LINC00575Q6W349 94 aa2.97□□□□□ -1.93
GYPB-205ENST00000505583 CLEC2BQ92478 149 aa2.97□□□□□ -1.93
GYPB-205ENST00000505583 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
GYPB-205ENST00000505583 F8WEM9 126 aa2.96□□□□□ -1.94
GYPB-205ENST00000505583 MT1FP04733 61 aa2.96□□□□□ -1.94
GYPB-205ENST00000505583 OCIAD2Q56VL3 154 aa2.96□□□□□ -1.94
GYPB-205ENST00000505583 Q96NJ1 140 aa2.96□□□□□ -1.94
GYPB-205ENST00000505583 NHP2Q9NX24 153 aaKnown RBP2.96□□□□□ -1.94
GYPB-205ENST00000505583 TRAV13-2A0A0B4J235 113 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 KRTAP16-1A8MUX0 517 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 H3BUT2 72 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 NDUFV3P56181 108 aaKnown RBP2.95□□□□□ -1.94
GYPB-205ENST00000505583 SEC61GP60059 68 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 COA6Q5JTJ3 125 aaKnown RBP2.95□□□□□ -1.94
GYPB-205ENST00000505583 Q6JHZ5 121 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 Q6ZVH6 145 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
GYPB-205ENST00000505583 C20orf166-AS1Q96NR2 134 aa2.95□□□□□ -1.94
GYPB-205ENST00000505583 hADV29S1A0JD25 119 aa2.94□□□□□ -1.94
GYPB-205ENST00000505583 C20orf202A1L168 122 aa2.94□□□□□ -1.94
GYPB-205ENST00000505583 A8MUU9 505 aa2.94□□□□□ -1.94
GYPB-205ENST00000505583 COPS9Q8WXC6 57 aa2.94□□□□□ -1.94
GYPB-205ENST00000505583 OCR1Q9BZK8 76 aa2.94□□□□□ -1.94
GYPB-205ENST00000505583 LST1O00453 97 aa2.93□□□□□ -1.94
GYPB-205ENST00000505583 VAMP3Q15836 100 aa2.93□□□□□ -1.94
GYPB-205ENST00000505583 DSCR10P59022 87 aa2.92□□□□□ -1.94
GYPB-205ENST00000505583 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.92□□□□□ -1.94
GYPB-205ENST00000505583 C12orf57Q99622 126 aa2.92□□□□□ -1.94
GYPB-205ENST00000505583 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
GYPB-205ENST00000505583 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
GYPB-205ENST00000505583 SNHG12Q9BXW3 62 aa2.91□□□□□ -1.94
GYPB-205ENST00000505583 TRBV20-1A0A075B6N2 111 aa2.9□□□□□ -1.95
GYPB-205ENST00000505583 A0A087WSZ3 146 aa2.9□□□□□ -1.95
GYPB-205ENST00000505583 HRES1P13985 223 aa2.9□□□□□ -1.95
GYPB-205ENST00000505583 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
GYPB-205ENST00000505583 NOTCH2NLQ7Z3S9 236 aa2.9□□□□□ -1.95
GYPB-205ENST00000505583 TEN1Q86WV5 123 aa2.89□□□□□ -1.95
GYPB-205ENST00000505583 PPDPFLQ8WWR9 84 aa2.89□□□□□ -1.95
GYPB-205ENST00000505583 FAM236DA0A1B0GTK5 79 aa2.88□□□□□ -1.95
GYPB-205ENST00000505583 FAM236CP0DP71 79 aa2.88□□□□□ -1.95
GYPB-205ENST00000505583 BVES-AS1Q5T3Y7 98 aa2.88□□□□□ -1.95
GYPB-205ENST00000505583 SS18L2Q9UHA2 77 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms