RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PEA15Q15121 130 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 R4GMQ9 66 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 DNAH7Q8WXX0 4024 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 DNAH10Q8IVF4 4471 aa1.1□□□□□ -2.23
TRAPPC13-208ENST00000505553 DNAH11Q96DT5 4516 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 TRGV1A0A0A0MS02 117 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 CRYM-AS1A6NIL9 109 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 H3BUX3 64 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 KRTDAPP60985 99 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 SEC11AP67812 179 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 SFTA2Q6UW10 78 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 BAGE3Q86Y29 109 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 MGST2Q99735 147 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 MANBALQ9NQG1 85 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 FRAS1Q86XX4 4008 aa1.09□□□□□ -2.23
TRAPPC13-208ENST00000505553 HUWE1Q7Z6Z7 4374 aaKnown RBP1.09□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRBV7-3A0A075B6L6 115 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 NAP1L6A6NFF2 107 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 CYB5AP00167 134 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 CCL18P55774 89 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 Q0VG73 95 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 VMO1Q7Z5L0 202 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 PRR15LQ9BU68 103 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 DOCK11Q5JSL3 2073 aa1.08□□□□□ -2.24
TRAPPC13-208ENST00000505553 TMEM14DPA8MWL7 114 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 H3BSH0 61 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 K7EP34 96 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 APOC3P02656 99 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 NMBP08949 121 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRAPPC2P0DI81 140 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRAPPC2BP0DI82 140 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 SPAG11BQ08648 103 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 SPAG11AQ6PDA7 123 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 C20orf78Q9BR46 151 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 DYNC1H1Q14204 4646 aaKnown RBP1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 SRRM2Q9UQ35 2752 aaKnown RBP1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
TRAPPC13-208ENST00000505553 GVQW2A0A096LPI5 108 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRAV1-2A0A0B4J238 106 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 A0A0G2JND7 137 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 ATOX1O00244 68 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 SFT2D2O95562 160 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 GYPAP02724 150 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 ASIPP42127 132 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 Q5VV11 94 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 ALKAL2Q6UX46 152 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 S100A16Q96FQ6 103 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 S100A13Q99584 98 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 A0A0D9SG42 100 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 CHKB-CPT1BH3BT56 60 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 DEFB136Q30KP8 78 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 TDRG1Q3Y452 100 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 NXT2Q9NPJ8 142 aaKnown RBP1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 NDUFA4L2Q9NRX3 87 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 V9GYH0 126 aa1.06□□□□□ -2.24
TRAPPC13-208ENST00000505553 HSPG2P98160 4391 aa1.05□□□□□ -2.24
TRAPPC13-208ENST00000505553 Q5VSD8 79 aa1.05□□□□□ -2.24
TRAPPC13-208ENST00000505553 SERP2Q8N6R1 65 aa1.05□□□□□ -2.24
TRAPPC13-208ENST00000505553 MYCBP2O75592 4640 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 MUC2Q02817 5179 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 PKHD1P08F94 4074 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRBV7-7A0A0K0K1E9 115 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 M0R1W7 72 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 Q6ZRX8 168 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 UBE2DNLQ8IWF7 75 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRGV9Q99603 122 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 C10orf95Q9H7T3 257 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 UQCR10Q9UDW1 63 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 CACFD1Q9UGQ2 172 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 SPCS1Q9Y6A9 102 aa1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 APOBP04114 4563 aaKnown RBP1.04□□□□□ -2.24
TRAPPC13-208ENST00000505553 FAT4Q6V0I7 4981 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 KMT2AQ03164 3969 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 TRAV22A0A0B4J277 110 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 IGLC7A0M8Q6 106 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 SYS1-DBNDD2H3BUS1 97 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 M0R135 149 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 HMGN2P05204 90 aaKnown RBP1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 IFI6P09912 130 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 GCHFRP30047 84 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 ADIRFQ15847 76 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 PRO1854Q9UHT4 67 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 HILPDAQ9Y5L2 63 aa1.03□□□□□ -2.24
TRAPPC13-208ENST00000505553 DNAH5Q8TE73 4624 aa1.03□□□□□ -2.25
TRAPPC13-208ENST00000505553 DNAH2Q9P225 4427 aa1.03□□□□□ -2.25
TRAPPC13-208ENST00000505553 VPS13DQ5THJ4 4388 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 DNAH17Q9UFH2 4485 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 CTXND1A0A1B0GTU2 59 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 NDUFC1O43677 76 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 SMR3BP02814 79 aaPredicted RBP1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 DEFA5Q01523 94 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 PMCHL1Q16048 86 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 ETDBQ3ZM63 59 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 TMEM170BQ5T4T1 132 aa1.02□□□□□ -2.25
TRAPPC13-208ENST00000505553 SMIM4Q8WVI0 70 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms