RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 Q0VG73 95 aa2.36□□□□□ -2.03
PDLIM1P4-201ENST00000504327 OR10AG1Q8NH19 301 aa2.36□□□□□ -2.03
PDLIM1P4-201ENST00000504327 C20orf78Q9BR46 151 aa2.36□□□□□ -2.03
PDLIM1P4-201ENST00000504327 NACAE9PAV3 2078 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 ALMS1Q8TCU4 4167 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TRGV2A0A075B6R0 118 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 H3BVH4 76 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DEFB4AO15263 64 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 RNASE3P12724 160 aaKnown RBP2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 HTN1P15515 57 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 RBM3P98179 157 aaKnown RBP2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 S100A7L2Q5SY68 101 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 PRR9Q5T870 116 aa2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 NXT2Q9NPJ8 142 aaKnown RBP2.35□□□□□ -2.03
PDLIM1P4-201ENST00000504327 DNAH10Q8IVF4 4471 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TRGV1A0A0A0MS02 117 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 TRBV6-4A0A1B0GX49 114 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 H3BNG1 76 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 SPINK4O60575 86 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 MOBPQ13875 183 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 RHOHQ15669 191 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 C9orf116Q5BN46 136 aaPredicted RBP2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 BAGE3Q86Y29 109 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
PDLIM1P4-201ENST00000504327 ABCA13Q86UQ4 5058 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LYSTQ99698 3801 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 MUC4Q99102 2169 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRGV4A0A0C4DH28 118 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 P0C880 135 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KRTDAPP60985 99 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 ZNF56Q15929 161 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 Q1T7F1 81 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 C1orf137Q5JT78 98 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 CFAP126Q5VTH2 177 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KRTAP26-1Q6PEX3 210 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 C15orf53Q8NAA6 179 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TIMM21Q9BVV7 248 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 ST20Q9HBF5 79 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 NOP10Q9NPE3 64 aaKnown RBP2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 PRO0255Q9UI72 69 aa2.33□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DNAH2Q9P225 4427 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV7-3A0A075B6L6 115 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LINC01546A6NGU7 62 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 D6R8Y8 96 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 F8W1H4 67 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 I3L3M4 83 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 M0QY20 66 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 IGHV3-33P01772 117 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DEFB130BP0DP73 79 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DEFB130AP0DP74 79 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 FCER1GP30273 86 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 FAM74A4Q5TZK3 123 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 PMCHL2Q9BQD1 86 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV10-3A0A0K0K1G6 114 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LCE6AA0A183 80 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 SDHAF1A6NFY7 115 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 CCKP06307 115 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 MGPP08493 103 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LINC00315P59091 139 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 CNBPP62633 177 aaKnown RBP2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 C18orf32Q8TCD1 76 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 SMIM2Q9BVW6 85 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 APLNQ9ULZ1 77 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DNAH6Q9C0G6 4158 aa2.31□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV25-1A0A075B6N4 114 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DEFB131BA0A096LNP1 70 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 A0A0G2JQZ4 141 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 NUPR2A6NF83 97 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 POLR2KP53803 58 aaKnown RBP2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 SEC11AP67812 179 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DYNC1H1Q14204 4646 aaKnown RBP2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRAV13-2A0A0B4J235 113 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 K7EP34 96 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 ATOX1O00244 68 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LEPROTL1O95214 131 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 IGKCP01834 107 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 PLNP26678 52 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 IFI27P40305 119 aaPredicted RBP2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 UBE2D3P61077 147 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 UBE2D2P62837 147 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 PMCHL1Q16048 86 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 CYP4F30PQ9H0H9 118 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 C22orf24Q9Y442 160 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
PDLIM1P4-201ENST00000504327 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
PDLIM1P4-201ENST00000504327 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms