RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 IGFL1Q6UW32 110 aa13.92□□□□□ -0.18
PCDH1-204ENST00000503492 RTL8CO15255 209 aa13.91□□□□□ -0.18
PCDH1-204ENST00000503492 IGLV8-61A0A075B6I0 122 aa13.9□□□□□ -0.18
PCDH1-204ENST00000503492 BCE1O60756 84 aa13.9□□□□□ -0.18
PCDH1-204ENST00000503492 IGKV4-1P06312 121 aa13.9□□□□□ -0.18
PCDH1-204ENST00000503492 SPRR1BP22528 89 aa13.88□□□□□ -0.19
PCDH1-204ENST00000503492 DNAH2Q9P225 4427 aa13.88□□□□□ -0.19
PCDH1-204ENST00000503492 KRTAP13-1Q8IUC0 172 aa13.88□□□□□ -0.19
PCDH1-204ENST00000503492 CYSTM1Q9H1C7 97 aa13.88□□□□□ -0.19
PCDH1-204ENST00000503492 C1orf134Q5TEV5 83 aa13.86□□□□□ -0.19
PCDH1-204ENST00000503492 LY6G6CO95867 125 aa13.85□□□□□ -0.19
PCDH1-204ENST00000503492 TRAV7A0A075B6U4 112 aa13.83□□□□□ -0.2
PCDH1-204ENST00000503492 DNAH17Q9UFH2 4485 aa13.83□□□□□ -0.2
PCDH1-204ENST00000503492 HECTD4Q9Y4D8 3996 aa13.82□□□□□ -0.2
PCDH1-204ENST00000503492 FBN3Q75N90 2809 aa13.82□□□□□ -0.2
PCDH1-204ENST00000503492 SMIM20Q8N5G0 67 aa13.8□□□□□ -0.2
PCDH1-204ENST00000503492 SRRM2Q9UQ35 2752 aaKnown RBP13.79□□□□□ -0.2
PCDH1-204ENST00000503492 IGLV5-52A0A0A0MRZ9 124 aa13.79□□□□□ -0.2
PCDH1-204ENST00000503492 PLAC8Q9NZF1 115 aa13.77□□□□□ -0.21
PCDH1-204ENST00000503492 DSCR10P59022 87 aa13.76□□□□□ -0.21
PCDH1-204ENST00000503492 A0A087WSZ3 146 aa13.75□□□□□ -0.21
PCDH1-204ENST00000503492 C20orf197Q8N268 126 aa13.75□□□□□ -0.21
PCDH1-204ENST00000503492 TGP01266 2768 aa13.74□□□□□ -0.21
PCDH1-204ENST00000503492 KRTAP21-3Q3LHN1 58 aa13.73□□□□□ -0.21
PCDH1-204ENST00000503492 PSORS1C2Q9UIG4 136 aa13.73□□□□□ -0.21
PCDH1-204ENST00000503492 WWC2-AS2Q96NR7 200 aa13.71□□□□□ -0.22
PCDH1-204ENST00000503492 K7EQZ3 153 aa13.69□□□□□ -0.22
PCDH1-204ENST00000503492 DNAH6Q9C0G6 4158 aa13.69□□□□□ -0.22
PCDH1-204ENST00000503492 DEFB116Q30KQ4 102 aa13.68□□□□□ -0.22
PCDH1-204ENST00000503492 OCR1Q9BZK8 76 aa13.65□□□□□ -0.22
PCDH1-204ENST00000503492 TMEM258P61165 79 aa13.65□□□□□ -0.22
PCDH1-204ENST00000503492 DNAH8Q96JB1 4490 aa13.64□□□□□ -0.23
PCDH1-204ENST00000503492 LINC00483Q53H64 154 aa13.64□□□□□ -0.23
PCDH1-204ENST00000503492 KLKP1Q107X0 134 aa13.62□□□□□ -0.23
PCDH1-204ENST00000503492 KRTAP10-2P60368 255 aa13.61□□□□□ -0.23
PCDH1-204ENST00000503492 SNURFQ9Y675 71 aa13.61□□□□□ -0.23
PCDH1-204ENST00000503492 IGLV9-49A0A0B4J1Y8 123 aa13.61□□□□□ -0.23
PCDH1-204ENST00000503492 ZNF861PO60384 105 aa13.61□□□□□ -0.23
PCDH1-204ENST00000503492 ZNF706Q9Y5V0 76 aaPredicted RBP13.59□□□□□ -0.23
PCDH1-204ENST00000503492 ALMS1Q8TCU4 4167 aa13.58□□□□□ -0.24
PCDH1-204ENST00000503492 FAM30AQ9NZY2 134 aa13.57□□□□□ -0.24
PCDH1-204ENST00000503492 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
PCDH1-204ENST00000503492 H7BZZ5 65 aa13.56□□□□□ -0.24
PCDH1-204ENST00000503492 LINC00472Q9H8W2 130 aa13.56□□□□□ -0.24
PCDH1-204ENST00000503492 HCG22E2RYF7 251 aa13.54□□□□□ -0.24
PCDH1-204ENST00000503492 ANAPC11Q9NYG5 84 aa13.54□□□□□ -0.24
PCDH1-204ENST00000503492 FRAS1Q86XX4 4008 aa13.54□□□□□ -0.24
PCDH1-204ENST00000503492 TMEM254Q8TBM7 123 aa13.53□□□□□ -0.24
PCDH1-204ENST00000503492 DNAH11Q96DT5 4516 aa13.52□□□□□ -0.24
PCDH1-204ENST00000503492 DNAH5Q8TE73 4624 aa13.52□□□□□ -0.25
PCDH1-204ENST00000503492 IGLV7-43P04211 117 aa13.51□□□□□ -0.25
PCDH1-204ENST00000503492 CIRBP-AS1Q8TBR5 109 aa13.51□□□□□ -0.25
PCDH1-204ENST00000503492 MOBPQ13875 183 aa13.49□□□□□ -0.25
PCDH1-204ENST00000503492 HYDINQ4G0P3 5121 aa13.47□□□□□ -0.25
PCDH1-204ENST00000503492 A0A0U1RQV1 116 aa13.46□□□□□ -0.25
PCDH1-204ENST00000503492 HRCT1Q6UXD1 115 aa13.46□□□□□ -0.25
PCDH1-204ENST00000503492 WFDC13Q8IUB5 93 aa13.46□□□□□ -0.25
PCDH1-204ENST00000503492 PRR15Q8IV56 129 aa13.46□□□□□ -0.25
PCDH1-204ENST00000503492 A8MWP4 228 aa13.45□□□□□ -0.26
PCDH1-204ENST00000503492 KRTAP10-1P60331 282 aa13.44□□□□□ -0.26
PCDH1-204ENST00000503492 J3KT08 172 aa13.43□□□□□ -0.26
PCDH1-204ENST00000503492 LCE6AA0A183 80 aa13.43□□□□□ -0.26
PCDH1-204ENST00000503492 FAM236DA0A1B0GTK5 79 aa13.43□□□□□ -0.26
PCDH1-204ENST00000503492 FAM236CP0DP71 79 aa13.43□□□□□ -0.26
PCDH1-204ENST00000503492 RPS28P62857 69 aaKnown RBP13.43□□□□□ -0.26
PCDH1-204ENST00000503492 NDUFC1O43677 76 aa13.42□□□□□ -0.26
PCDH1-204ENST00000503492 Q6ZSA8 131 aa13.42□□□□□ -0.26
PCDH1-204ENST00000503492 Q96NJ1 140 aa13.42□□□□□ -0.26
PCDH1-204ENST00000503492 KRTAP29-1A8MX34 341 aaPredicted RBP13.41□□□□□ -0.26
PCDH1-204ENST00000503492 FAT2Q9NYQ8 4349 aa13.4□□□□□ -0.26
PCDH1-204ENST00000503492 PKD1P98161 4303 aa13.39□□□□□ -0.27
PCDH1-204ENST00000503492 CASC2Q6XLA1 102 aa13.36□□□□□ -0.27
PCDH1-204ENST00000503492 OXTP01178 125 aa13.35□□□□□ -0.27
PCDH1-204ENST00000503492 C5orf47Q569G3 176 aa13.31□□□□□ -0.28
PCDH1-204ENST00000503492 NDUFB1O75438 58 aa13.3□□□□□ -0.28
PCDH1-204ENST00000503492 MMP24-AS1A0A0U1RRL7 71 aa13.3□□□□□ -0.28
PCDH1-204ENST00000503492 ZCCHC13Q8WW36 166 aaKnown RBP13.28□□□□□ -0.28
PCDH1-204ENST00000503492 LRP1BQ9NZR2 4599 aa13.25□□□□□ -0.29
PCDH1-204ENST00000503492 SERP1Q9Y6X1 66 aa13.23□□□□□ -0.29
PCDH1-204ENST00000503492 ATP5EP56381 51 aaPredicted RBP13.22□□□□□ -0.29
PCDH1-204ENST00000503492 hDV103S1A0JD37 113 aa13.22□□□□□ -0.29
PCDH1-204ENST00000503492 SSBP3-AS1Q7Z2R9 100 aa13.22□□□□□ -0.29
PCDH1-204ENST00000503492 C8orf17Q9NRJ1 99 aa13.2□□□□□ -0.3
PCDH1-204ENST00000503492 A0A087X002 238 aa13.19□□□□□ -0.3
PCDH1-204ENST00000503492 A0A1B0GVX0 72 aa13.19□□□□□ -0.3
PCDH1-204ENST00000503492 ASB16-AS1Q495Z4 193 aa13.19□□□□□ -0.3
PCDH1-204ENST00000503492 CD164Q04900 197 aa13.18□□□□□ -0.3
PCDH1-204ENST00000503492 SACSQ9NZJ4 4579 aa13.17□□□□□ -0.3
PCDH1-204ENST00000503492 IGHV6-1A0A0B4J1U7 121 aa13.17□□□□□ -0.3
PCDH1-204ENST00000503492 MP68P56378 58 aa13.17□□□□□ -0.3
PCDH1-204ENST00000503492 CDK2AP2O75956 126 aa13.16□□□□□ -0.3
PCDH1-204ENST00000503492 KRTAP13-2Q52LG2 175 aa13.16□□□□□ -0.3
PCDH1-204ENST00000503492 H0Y9P7 68 aa13.14□□□□□ -0.31
PCDH1-204ENST00000503492 LINC00208Q96KT6 92 aa13.13□□□□□ -0.31
PCDH1-204ENST00000503492 SPINK6Q6UWN8 80 aa13.12□□□□□ -0.31
PCDH1-204ENST00000503492 KRTAP1-4P0C5Y4 121 aa13.1□□□□□ -0.31
PCDH1-204ENST00000503492 FAM229BQ4G0N7 80 aa13.1□□□□□ -0.31
PCDH1-204ENST00000503492 NOTCH2NLQ7Z3S9 236 aa13.1□□□□□ -0.31
PCDH1-204ENST00000503492 TRAV22A0A0B4J277 110 aa13.08□□□□□ -0.32
PCDH1-204ENST00000503492 VPS13BQ7Z7G8 4022 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms