RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 C1orf137Q5JT78 98 aa13.51□□□□□ -0.25
PTPN13-205ENST00000502971 FAM30AQ9NZY2 134 aa13.5□□□□□ -0.25
PTPN13-205ENST00000502971 DNAH11Q96DT5 4516 aa13.5□□□□□ -0.25
PTPN13-205ENST00000502971 Q6ZSA8 131 aa13.5□□□□□ -0.25
PTPN13-205ENST00000502971 KRTAP10-1P60331 282 aa13.48□□□□□ -0.25
PTPN13-205ENST00000502971 A0A1B0GW54 56 aa13.47□□□□□ -0.25
PTPN13-205ENST00000502971 ATP5EP2Q5VTU8 51 aa13.47□□□□□ -0.25
PTPN13-205ENST00000502971 CIRBP-AS1Q8TBR5 109 aa13.47□□□□□ -0.25
PTPN13-205ENST00000502971 IGLV8-61A0A075B6I0 122 aa13.47□□□□□ -0.25
PTPN13-205ENST00000502971 DNAH5Q8TE73 4624 aa13.46□□□□□ -0.26
PTPN13-205ENST00000502971 Q6ZVQ6 151 aa13.44□□□□□ -0.26
PTPN13-205ENST00000502971 IGKV3D-7A0A0C4DH55 119 aa13.44□□□□□ -0.26
PTPN13-205ENST00000502971 A0A1B0GVY2 172 aa13.44□□□□□ -0.26
PTPN13-205ENST00000502971 ZNF861PO60384 105 aa13.44□□□□□ -0.26
PTPN13-205ENST00000502971 A0A1W2PNM2 257 aa13.43□□□□□ -0.26
PTPN13-205ENST00000502971 Q8NBF4 154 aa13.43□□□□□ -0.26
PTPN13-205ENST00000502971 PKD1P98161 4303 aa13.43□□□□□ -0.26
PTPN13-205ENST00000502971 SCXQ7RTU7 201 aa13.42□□□□□ -0.26
PTPN13-205ENST00000502971 ZNF706Q9Y5V0 76 aaPredicted RBP13.42□□□□□ -0.26
PTPN13-205ENST00000502971 DNAH8Q96JB1 4490 aa13.41□□□□□ -0.26
PTPN13-205ENST00000502971 SPRR4Q96PI1 79 aa13.41□□□□□ -0.26
PTPN13-205ENST00000502971 IGLV7-43P04211 117 aa13.39□□□□□ -0.27
PTPN13-205ENST00000502971 IGFL1Q6UW32 110 aa13.39□□□□□ -0.27
PTPN13-205ENST00000502971 LINC00483Q53H64 154 aa13.38□□□□□ -0.27
PTPN13-205ENST00000502971 HAMPP81172 84 aa13.36□□□□□ -0.27
PTPN13-205ENST00000502971 CRYGAP11844 174 aa13.35□□□□□ -0.27
PTPN13-205ENST00000502971 NREPQ16612 68 aa13.35□□□□□ -0.27
PTPN13-205ENST00000502971 CXCL6P80162 114 aa13.34□□□□□ -0.27
PTPN13-205ENST00000502971 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
PTPN13-205ENST00000502971 EPPK1P58107 5090 aaKnown RBP13.29□□□□□ -0.28
PTPN13-205ENST00000502971 A0A0G2JQZ4 141 aa13.28□□□□□ -0.28
PTPN13-205ENST00000502971 FAM236AA0A1B0GUQ0 79 aa13.28□□□□□ -0.28
PTPN13-205ENST00000502971 FAM236BA0A1B0GV22 79 aa13.28□□□□□ -0.28
PTPN13-205ENST00000502971 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
PTPN13-205ENST00000502971 RPL37AP61513 92 aaKnown RBP13.27□□□□□ -0.29
PTPN13-205ENST00000502971 ANAPC13Q9BS18 74 aa13.25□□□□□ -0.29
PTPN13-205ENST00000502971 A0A087WVE0 104 aa13.23□□□□□ -0.29
PTPN13-205ENST00000502971 IGLV9-49A0A0B4J1Y8 123 aa13.23□□□□□ -0.29
PTPN13-205ENST00000502971 C9orf153Q5TBE3 101 aa13.23□□□□□ -0.29
PTPN13-205ENST00000502971 BPY2O14599 106 aa13.22□□□□□ -0.29
PTPN13-205ENST00000502971 SRRM2Q9UQ35 2752 aaKnown RBP13.21□□□□□ -0.3
PTPN13-205ENST00000502971 A0A087WSZ3 146 aa13.19□□□□□ -0.3
PTPN13-205ENST00000502971 LRP1BQ9NZR2 4599 aa13.17□□□□□ -0.3
PTPN13-205ENST00000502971 ANAPC11Q9NYG5 84 aa13.16□□□□□ -0.3
PTPN13-205ENST00000502971 MOBPQ13875 183 aa13.15□□□□□ -0.3
PTPN13-205ENST00000502971 ATOX1O00244 68 aa13.14□□□□□ -0.31
PTPN13-205ENST00000502971 DYNC1H1Q14204 4646 aaKnown RBP13.12□□□□□ -0.31
PTPN13-205ENST00000502971 IGKV4-1P06312 121 aa13.1□□□□□ -0.31
PTPN13-205ENST00000502971 Q8N9L7 120 aa13.07□□□□□ -0.32
PTPN13-205ENST00000502971 DSCR10P59022 87 aa13.06□□□□□ -0.32
PTPN13-205ENST00000502971 FAM229BQ4G0N7 80 aa13.05□□□□□ -0.32
PTPN13-205ENST00000502971 SSBP3-AS1Q7Z2R9 100 aa13.05□□□□□ -0.32
PTPN13-205ENST00000502971 LINC00472Q9H8W2 130 aa13.02□□□□□ -0.32
PTPN13-205ENST00000502971 BIRC6Q9NR09 4857 aa13.02□□□□□ -0.32
PTPN13-205ENST00000502971 CDK2AP2O75956 126 aa13.02□□□□□ -0.33
PTPN13-205ENST00000502971 SS18L2Q9UHA2 77 aa13.02□□□□□ -0.33
PTPN13-205ENST00000502971 HRCT1Q6UXD1 115 aa13.01□□□□□ -0.33
PTPN13-205ENST00000502971 DEFB116Q30KQ4 102 aa12.99□□□□□ -0.33
PTPN13-205ENST00000502971 CD164Q04900 197 aa12.98□□□□□ -0.33
PTPN13-205ENST00000502971 SPINK6Q6UWN8 80 aa12.98□□□□□ -0.33
PTPN13-205ENST00000502971 APOBP04114 4563 aaKnown RBP12.98□□□□□ -0.33
PTPN13-205ENST00000502971 K7EQZ3 153 aa12.97□□□□□ -0.33
PTPN13-205ENST00000502971 KRTAP1-4P0C5Y4 121 aa12.97□□□□□ -0.33
PTPN13-205ENST00000502971 J3KT08 172 aa12.96□□□□□ -0.33
PTPN13-205ENST00000502971 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
PTPN13-205ENST00000502971 A0A087X002 238 aa12.96□□□□□ -0.34
PTPN13-205ENST00000502971 COX7CP15954 63 aa12.96□□□□□ -0.34
PTPN13-205ENST00000502971 CCDC179H3BU77 68 aa12.95□□□□□ -0.34
PTPN13-205ENST00000502971 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
PTPN13-205ENST00000502971 VPS13BQ7Z7G8 4022 aa12.95□□□□□ -0.34
PTPN13-205ENST00000502971 UQCRQO14949 82 aa12.94□□□□□ -0.34
PTPN13-205ENST00000502971 SMR3BP02814 79 aaPredicted RBP12.94□□□□□ -0.34
PTPN13-205ENST00000502971 KRTAP13-2Q52LG2 175 aa12.93□□□□□ -0.34
PTPN13-205ENST00000502971 Q96NJ1 140 aa12.91□□□□□ -0.34
PTPN13-205ENST00000502971 A8MWP4 228 aa12.91□□□□□ -0.34
PTPN13-205ENST00000502971 TRAV7A0A075B6U4 112 aa12.88□□□□□ -0.35
PTPN13-205ENST00000502971 PLA2G1BP04054 148 aaKnown RBP12.88□□□□□ -0.35
PTPN13-205ENST00000502971 PRR15Q8IV56 129 aa12.88□□□□□ -0.35
PTPN13-205ENST00000502971 HCG22E2RYF7 251 aa12.86□□□□□ -0.35
PTPN13-205ENST00000502971 KRTAP10-4P60372 401 aaPredicted RBP12.85□□□□□ -0.35
PTPN13-205ENST00000502971 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
PTPN13-205ENST00000502971 NDUFB1O75438 58 aa12.84□□□□□ -0.35
PTPN13-205ENST00000502971 FAM229AH3BQW9 127 aa12.83□□□□□ -0.36
PTPN13-205ENST00000502971 ASB16-AS1Q495Z4 193 aa12.82□□□□□ -0.36
PTPN13-205ENST00000502971 RYR1P21817 5038 aa12.81□□□□□ -0.36
PTPN13-205ENST00000502971 TYMSOSQ8TAI1 123 aa12.79□□□□□ -0.36
PTPN13-205ENST00000502971 Q5XG85 94 aa12.79□□□□□ -0.36
PTPN13-205ENST00000502971 OCR1Q9BZK8 76 aa12.78□□□□□ -0.36
PTPN13-205ENST00000502971 HSPG2P98160 4391 aa12.77□□□□□ -0.36
PTPN13-205ENST00000502971 FAT1Q14517 4588 aa12.75□□□□□ -0.37
PTPN13-205ENST00000502971 KRTAP29-1A8MX34 341 aaPredicted RBP12.74□□□□□ -0.37
PTPN13-205ENST00000502971 WFDC13Q8IUB5 93 aa12.74□□□□□ -0.37
PTPN13-205ENST00000502971 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
PTPN13-205ENST00000502971 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
PTPN13-205ENST00000502971 A0A1B0GVX0 72 aa12.72□□□□□ -0.37
PTPN13-205ENST00000502971 Q5VSD8 79 aa12.71□□□□□ -0.37
PTPN13-205ENST00000502971 Q8N1X5 172 aa12.71□□□□□ -0.37
PTPN13-205ENST00000502971 LIMD2Q9BT23 127 aa12.71□□□□□ -0.37
PTPN13-205ENST00000502971 MMP24-AS1A0A0U1RRL7 71 aa12.71□□□□□ -0.38
PTPN13-205ENST00000502971 PRR26Q8N8Z3 221 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms